RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 AFMP43652 599 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 UBE3CQ15386 1083 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 SKIDA1Q1XH10 827 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 LRRN4CLQ8ND94 238 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 WASF1Q92558 559 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 NBPF3Q9H094 633 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 EFCC1Q9HA90 598 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 CABP5Q9NP86 173 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 NR5A1Q13285 461 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 DHX8Q14562 1220 aaKnown RBP18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 NOSTRINQ8IVI9 506 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 FBXL16Q8N461 479 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 STRBPQ96SI9 672 aaKnown RBP18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 CARD6Q9BX69 1037 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 ARGLU1Q9NWB6 273 aaPredicted RBP18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 SERTAD1Q9UHV2 236 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 MAP3K15Q6ZN16 1313 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 ZSCAN12O43309 604 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 RANBP6O60518 1105 aaKnown RBP18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 CSF1RP07333 972 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 SLC5A1P13866 664 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 STX17P56962 302 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 ST5P78524 1137 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 METTL16Q86W50 562 aaKnown RBP18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 SPATA5Q8NB90 893 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 NOP2P46087 812 aaKnown RBP18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 CT47A1Q5JQC4 288 aaPredicted RBP18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 ZSWIM4Q9H7M6 989 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 ZBTB1Q9Y2K1 713 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 UBN2Q6ZU65 1347 aa18.87■□□□□ 0.61
CDC42EP4-201ENST00000335793 DZIP3Q86Y13 1208 aaKnown RBP18.86■□□□□ 0.61
CDC42EP4-201ENST00000335793 LY9Q9HBG7 655 aa18.86■□□□□ 0.61
CDC42EP4-201ENST00000335793 GRIN1Q05586 938 aa18.86■□□□□ 0.61
CDC42EP4-201ENST00000335793 IGDCC4Q8TDY8 1250 aa18.86■□□□□ 0.61
CDC42EP4-201ENST00000335793 TNS3Q68CZ2 1445 aa18.86■□□□□ 0.61
CDC42EP4-201ENST00000335793 POSTNQ15063 836 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 PUM3Q15397 648 aaKnown RBP18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 AKNAD1Q5T1N1 836 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 TMCO3Q6UWJ1 677 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 FOXP4Q8IVH2 680 aaPredicted RBP18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 DHX58Q96C10 678 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 FAM212AQ96EL1 285 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 BAG1Q99933 345 aaPredicted RBP18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 CPDO75976 1380 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 TRIM28Q13263 835 aaKnown RBP18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 KARSQ15046 597 aaKnown RBP18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 TEX35Q5T0J7 233 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 RESP18Q5W5W9 173 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 LPIN2Q92539 896 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 CCDC34Q96HJ3 373 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 ZNF446Q9NWS9 450 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 PDE8AO60658 829 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 PDE4BQ07343 736 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 BMS1Q14692 1282 aaKnown RBP18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 PTPAQ15257 358 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 ICE2Q659A1 982 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 KRT23Q9C075 422 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 RAI14Q9P0K7 980 aa18.85■□□□□ 0.61
CDC42EP4-201ENST00000335793 CASQ1P31415 396 aa18.84■□□□□ 0.61
CDC42EP4-201ENST00000335793 CARD10Q9BWT7 1032 aa18.84■□□□□ 0.61
CDC42EP4-201ENST00000335793 TUBE1Q9UJT0 475 aa18.84■□□□□ 0.61
CDC42EP4-201ENST00000335793 SCN11AQ9UI33 1791 aa18.84■□□□□ 0.61
CDC42EP4-201ENST00000335793 BCAMP50895 628 aa18.84■□□□□ 0.61
CDC42EP4-201ENST00000335793 MYCBPQ99417 103 aaPredicted RBP18.84■□□□□ 0.61
CDC42EP4-201ENST00000335793 DESI2Q9BSY9 194 aa18.84■□□□□ 0.61
CDC42EP4-201ENST00000335793 PCDHB6Q9Y5E3 794 aa18.84■□□□□ 0.61
CDC42EP4-201ENST00000335793 EPC1Q9H2F5 836 aa18.84■□□□□ 0.61
CDC42EP4-201ENST00000335793 CNNM2Q9H8M5 875 aa18.84■□□□□ 0.61
CDC42EP4-201ENST00000335793 DACH1Q9UI36 760 aa18.84■□□□□ 0.61
CDC42EP4-201ENST00000335793 RASGRF1Q13972 1273 aa18.83■□□□□ 0.61
CDC42EP4-201ENST00000335793 BRINP3Q76B58 766 aa18.83■□□□□ 0.61
CDC42EP4-201ENST00000335793 VSTM4Q8IW00 320 aa18.83■□□□□ 0.61
CDC42EP4-201ENST00000335793 SEC31BQ9NQW1 1179 aa18.83■□□□□ 0.61
CDC42EP4-201ENST00000335793 MST1RQ04912 1400 aa18.83■□□□□ 0.6
CDC42EP4-201ENST00000335793 STAMQ92783 540 aa18.83■□□□□ 0.6
CDC42EP4-201ENST00000335793 CCDC196A0A1B0GTZ2 297 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 SDR42E1Q8WUS8 393 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 HPSEQ9Y251 543 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 PRDM1O75626 825 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 XBP1P17861 261 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 CYP7A1P22680 504 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 LCORLQ8N3X6 602 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 MAP3K14Q99558 947 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 EPB41L4AQ9HCS5 686 aaPredicted RBP18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 SAMSN1Q9NSI8 373 aaKnown RBP18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 MAN1B1Q9UKM7 699 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 PPP2R2CQ9Y2T4 447 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 PES1O00541 588 aaKnown RBP18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 NTRK3Q16288 839 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 RILPL1Q5EBL4 403 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 USP49Q70CQ1 688 aa18.82■□□□□ 0.6
CDC42EP4-201ENST00000335793 PHRF1Q9P1Y6 1649 aaKnown RBP18.81■□□□□ 0.6
CDC42EP4-201ENST00000335793 SIPA1L3O60292 1781 aaPredicted RBP18.81■□□□□ 0.6
CDC42EP4-201ENST00000335793 ARFGEF2Q9Y6D5 1785 aa18.81■□□□□ 0.6
CDC42EP4-201ENST00000335793 ARHGAP6O43182 974 aa18.81■□□□□ 0.6
CDC42EP4-201ENST00000335793 CLCN6P51797 869 aa18.81■□□□□ 0.6
CDC42EP4-201ENST00000335793 DNAJC21Q5F1R6 531 aaKnown RBP18.81■□□□□ 0.6
CDC42EP4-201ENST00000335793 PPFIBP1Q86W92 1011 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 188.2 ms