RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 PATL2C9JE40 543 aaKnown RBP15.97■□□□□ 0.15
SF1-202ENST00000334944 WDHD1O75717 1129 aaPredicted RBP15.97■□□□□ 0.15
SF1-202ENST00000334944 ATP2B1P20020 1258 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 ZSCAN26Q16670 478 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 NYAP1Q6ZVC0 841 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 FMR1NBQ8N0W7 255 aaPredicted RBP15.97■□□□□ 0.15
SF1-202ENST00000334944 AOPEPQ8N6M6 819 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 NUP133Q8WUM0 1156 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 RAI14Q9P0K7 980 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 ZMYM6O95789 1325 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 hCG_1642624A0A1W2PR95 340 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 CYP7A1P22680 504 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 EVX2Q03828 476 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 IQCB1Q15051 598 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 CLIC6Q96NY7 704 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 FAM217BQ9NTX9 383 aaPredicted RBP15.97■□□□□ 0.15
SF1-202ENST00000334944 KCNJ14Q9UNX9 436 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 SLC12A7Q9Y666 1083 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 TAF1P21675 1872 aa15.96■□□□□ 0.15
SF1-202ENST00000334944 PRDM1O75626 825 aa15.96■□□□□ 0.15
SF1-202ENST00000334944 MYCNP04198 464 aaPredicted RBP15.96■□□□□ 0.15
SF1-202ENST00000334944 KLRK1P26718 216 aa15.96■□□□□ 0.15
SF1-202ENST00000334944 TICAM2Q86XR7 235 aa15.96■□□□□ 0.15
SF1-202ENST00000334944 FBXL16Q8N461 479 aa15.96■□□□□ 0.15
SF1-202ENST00000334944 TDRD7Q8NHU6 1098 aaKnown RBP15.96■□□□□ 0.15
SF1-202ENST00000334944 ABCC12Q96J65 1359 aa15.96■□□□□ 0.15
SF1-202ENST00000334944 MROH7-TTC4A0A0A0MT08 1334 aa15.96■□□□□ 0.15
SF1-202ENST00000334944 H2AFXP16104 143 aaPredicted RBP15.96■□□□□ 0.15
SF1-202ENST00000334944 IARSP41252 1262 aaKnown RBP15.96■□□□□ 0.15
SF1-202ENST00000334944 SART3Q15020 963 aaKnown RBP15.96■□□□□ 0.15
SF1-202ENST00000334944 STX1AQ16623 288 aa15.96■□□□□ 0.15
SF1-202ENST00000334944 DPCR1Q3MIW9 517 aa15.96■□□□□ 0.15
SF1-202ENST00000334944 ANO1Q5XXA6 986 aa15.96■□□□□ 0.15
SF1-202ENST00000334944 ADALQ6DHV7 355 aa15.96■□□□□ 0.15
SF1-202ENST00000334944 MFSD6Q6ZSS7 791 aa15.96■□□□□ 0.15
SF1-202ENST00000334944 COL16A1Q07092 1604 aaPredicted RBP15.96■□□□□ 0.15
SF1-202ENST00000334944 EP400Q96L91 3159 aa15.96■□□□□ 0.14
SF1-202ENST00000334944 DRC1Q96MC2 740 aa15.96■□□□□ 0.14
SF1-202ENST00000334944 TEX35Q5T0J7 233 aa15.95■□□□□ 0.14
SF1-202ENST00000334944 LINC00116Q8NCU8 138 aa15.95■□□□□ 0.14
SF1-202ENST00000334944 DYNLL1P63167 89 aaKnown RBP15.95■□□□□ 0.14
SF1-202ENST00000334944 AKNAD1Q5T1N1 836 aa15.95■□□□□ 0.14
SF1-202ENST00000334944 CCAR2Q8N163 923 aaKnown RBP15.95■□□□□ 0.14
SF1-202ENST00000334944 SRP68Q9UHB9 627 aaKnown RBP15.95■□□□□ 0.14
SF1-202ENST00000334944 COL14A1Q05707 1796 aaKnown RBP15.95■□□□□ 0.14
SF1-202ENST00000334944 CHRM1P11229 460 aaPredicted RBP15.94■□□□□ 0.14
SF1-202ENST00000334944 OAS2P29728 719 aaKnown RBP15.94■□□□□ 0.14
SF1-202ENST00000334944 DHX40Q8IX18 779 aaKnown RBP15.94■□□□□ 0.14
SF1-202ENST00000334944 CELF1Q92879 486 aaKnown RBP15.94■□□□□ 0.14
SF1-202ENST00000334944 ZNF202O95125 648 aa15.94■□□□□ 0.14
SF1-202ENST00000334944 PFKFB1P16118 471 aa15.94■□□□□ 0.14
SF1-202ENST00000334944 LMAN1P49257 510 aa15.94■□□□□ 0.14
SF1-202ENST00000334944 NTRK3Q16288 839 aa15.94■□□□□ 0.14
SF1-202ENST00000334944 EFCC1Q9HA90 598 aa15.94■□□□□ 0.14
SF1-202ENST00000334944 CASQ1P31415 396 aa15.93■□□□□ 0.14
SF1-202ENST00000334944 TMCO3Q6UWJ1 677 aa15.93■□□□□ 0.14
SF1-202ENST00000334944 POLR3EQ9NVU0 708 aa15.93■□□□□ 0.14
SF1-202ENST00000334944 TFCP2L1Q9NZI6 479 aa15.93■□□□□ 0.14
SF1-202ENST00000334944 ANKRD36CQ5JPF3 1778 aa15.93■□□□□ 0.14
SF1-202ENST00000334944 CCZ1BP86790 482 aa15.93■□□□□ 0.14
SF1-202ENST00000334944 CCZ1P86791 482 aaPredicted RBP15.93■□□□□ 0.14
SF1-202ENST00000334944 PTPN21Q16825 1174 aa15.93■□□□□ 0.14
SF1-202ENST00000334944 KCNG4Q8TDN1 519 aa15.93■□□□□ 0.14
SF1-202ENST00000334944 C8orf37Q96NL8 207 aa15.93■□□□□ 0.14
SF1-202ENST00000334944 BTBD18B2RXH4 712 aa15.93■□□□□ 0.14
SF1-202ENST00000334944 PARP10Q53GL7 1025 aa15.93■□□□□ 0.14
SF1-202ENST00000334944 AXDND1Q5T1B0 1012 aaPredicted RBP15.93■□□□□ 0.14
SF1-202ENST00000334944 SASH3O75995 380 aa15.92■□□□□ 0.14
SF1-202ENST00000334944 ZRSR1Q15695 479 aaKnown RBP15.92■□□□□ 0.14
SF1-202ENST00000334944 E2F4Q16254 413 aa15.92■□□□□ 0.14
SF1-202ENST00000334944 TBC1D9BQ66K14 1250 aa15.92■□□□□ 0.14
SF1-202ENST00000334944 CPLX2Q6PUV4 134 aaKnown RBP15.92■□□□□ 0.14
SF1-202ENST00000334944 BRAPQ7Z569 592 aa15.92■□□□□ 0.14
SF1-202ENST00000334944 BAZ2BQ9UIF8 2168 aaKnown RBP15.92■□□□□ 0.14
SF1-202ENST00000334944 ATRNO75882 1429 aa15.92■□□□□ 0.14
SF1-202ENST00000334944 CTAGE5O15320 804 aa15.92■□□□□ 0.14
SF1-202ENST00000334944 ANKRD18AQ8IVF6 992 aa15.92■□□□□ 0.14
SF1-202ENST00000334944 TMEM87BQ96K49 555 aa15.92■□□□□ 0.14
SF1-202ENST00000334944 ANO10Q9NW15 660 aa15.92■□□□□ 0.14
SF1-202ENST00000334944 MYH15Q9Y2K3 1946 aa15.92■□□□□ 0.14
SF1-202ENST00000334944 SPATA31A5Q5VU36 1347 aa15.92■□□□□ 0.14
SF1-202ENST00000334944 SPATA31A7Q8IWB4 1347 aa15.92■□□□□ 0.14
SF1-202ENST00000334944 TRIM29Q14134 588 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 ATL3Q6DD88 541 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 FAM177A1Q8N128 213 aaPredicted RBP15.91■□□□□ 0.14
SF1-202ENST00000334944 TXLNBQ8N3L3 684 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 NACAP1Q9BZK3 213 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 YEATS4O95619 227 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 SLC3A2P08195 630 aaKnown RBP15.91■□□□□ 0.14
SF1-202ENST00000334944 NR5A1Q13285 461 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 WTAPQ15007 396 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 SKIDA1Q1XH10 827 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 AMIGO3Q86WK7 504 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 CEP57L1Q8IYX8 460 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 KIAA1468Q9P260 1216 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 GRIN1Q05586 938 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 SSRP1Q08945 709 aaKnown RBP15.91■□□□□ 0.14
SF1-202ENST00000334944 HSP90AA4PQ58FG1 418 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 ICE2Q659A1 982 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 FOXR1Q6PIV2 292 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms