RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 TBC1D10CQ8IV04 446 aa22.23■■□□□ 1.15
TSSC4-201ENST00000333256 SLC44A5Q8NCS7 719 aa22.23■■□□□ 1.15
TSSC4-201ENST00000333256 PI4KBQ9UBF8 816 aa22.23■■□□□ 1.15
TSSC4-201ENST00000333256 FZD1Q9UP38 647 aa22.23■■□□□ 1.15
TSSC4-201ENST00000333256 PPP2R3BQ9Y5P8 575 aa22.23■■□□□ 1.15
TSSC4-201ENST00000333256 CDCA5Q96FF9 252 aa22.23■■□□□ 1.15
TSSC4-201ENST00000333256 TACC3Q9Y6A5 838 aa22.23■■□□□ 1.15
TSSC4-201ENST00000333256 COL2A1P02458 1487 aaPredicted RBP22.23■■□□□ 1.15
TSSC4-201ENST00000333256 CRACR2BQ8N4Y2 399 aaPredicted RBP22.22■■□□□ 1.15
TSSC4-201ENST00000333256 DNAJC18Q9H819 358 aa22.22■■□□□ 1.15
TSSC4-201ENST00000333256 SERPINB13Q9UIV8 391 aa22.22■■□□□ 1.15
TSSC4-201ENST00000333256 PRDM1O75626 825 aa22.21■■□□□ 1.15
TSSC4-201ENST00000333256 HSPA4P34932 840 aa22.21■■□□□ 1.15
TSSC4-201ENST00000333256 PRKG1Q13976 671 aa22.21■■□□□ 1.15
TSSC4-201ENST00000333256 RASEFQ8IZ41 740 aa22.21■■□□□ 1.15
TSSC4-201ENST00000333256 EIF5BO60841 1220 aaKnown RBP22.2■■□□□ 1.15
TSSC4-201ENST00000333256 ZNF408Q9H9D4 720 aa22.2■■□□□ 1.15
TSSC4-201ENST00000333256 ANAPC4Q9UJX5 808 aa22.2■■□□□ 1.15
TSSC4-201ENST00000333256 SSC5DA1L4H1 1573 aa22.2■■□□□ 1.14
TSSC4-201ENST00000333256 TRIM34Q9BYJ4 488 aa22.2■■□□□ 1.14
TSSC4-201ENST00000333256 SIPA1L1O43166 1804 aa22.19■■□□□ 1.14
TSSC4-201ENST00000333256 EPB41L2O43491 1005 aaKnown RBP22.19■■□□□ 1.14
TSSC4-201ENST00000333256 GABPAQ06546 454 aa22.19■■□□□ 1.14
TSSC4-201ENST00000333256 RNF20Q5VTR2 975 aa22.19■■□□□ 1.14
TSSC4-201ENST00000333256 C16orf86Q6ZW13 317 aa22.19■■□□□ 1.14
TSSC4-201ENST00000333256 FOXP4Q8IVH2 680 aaPredicted RBP22.19■■□□□ 1.14
TSSC4-201ENST00000333256 EHD4Q9H223 541 aa22.19■■□□□ 1.14
TSSC4-201ENST00000333256 UPF2Q9HAU5 1272 aaKnown RBP22.19■■□□□ 1.14
TSSC4-201ENST00000333256 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.19■■□□□ 1.14
TSSC4-201ENST00000333256 TOMM22Q9NS69 142 aa22.19■■□□□ 1.14
TSSC4-201ENST00000333256 ROBO3Q96MS0 1386 aa22.18■■□□□ 1.14
TSSC4-201ENST00000333256 LAMB1P07942 1786 aa22.18■■□□□ 1.14
TSSC4-201ENST00000333256 ITGBL1O95965 494 aaPredicted RBP22.18■■□□□ 1.14
TSSC4-201ENST00000333256 CDK8P49336 464 aa22.18■■□□□ 1.14
TSSC4-201ENST00000333256 SUPT20HL1Q3ZLR7 823 aa22.18■■□□□ 1.14
TSSC4-201ENST00000333256 STOX1Q6ZVD7 989 aa22.18■■□□□ 1.14
TSSC4-201ENST00000333256 TOMM70O94826 608 aa22.17■■□□□ 1.14
TSSC4-201ENST00000333256 SLC3A2P08195 630 aaKnown RBP22.17■■□□□ 1.14
TSSC4-201ENST00000333256 MCCP23508 829 aa22.17■■□□□ 1.14
TSSC4-201ENST00000333256 RRP12Q5JTH9 1297 aaKnown RBP22.17■■□□□ 1.14
TSSC4-201ENST00000333256 AKNAD1Q5T1N1 836 aa22.17■■□□□ 1.14
TSSC4-201ENST00000333256 NKX2-3Q8TAU0 364 aa22.17■■□□□ 1.14
TSSC4-201ENST00000333256 C22orf23Q9BZE7 217 aa22.17■■□□□ 1.14
TSSC4-201ENST00000333256 SNX14Q9Y5W7 946 aa22.17■■□□□ 1.14
TSSC4-201ENST00000333256 NEDD4P46934 1319 aa22.17■■□□□ 1.14
TSSC4-201ENST00000333256 E7EWF7 191 aa22.17■■□□□ 1.14
TSSC4-201ENST00000333256 ZKSCAN1P17029 563 aaPredicted RBP22.17■■□□□ 1.14
TSSC4-201ENST00000333256 SHMT1P34896 483 aa22.17■■□□□ 1.14
TSSC4-201ENST00000333256 MFSD6Q6ZSS7 791 aa22.17■■□□□ 1.14
TSSC4-201ENST00000333256 METTL16Q86W50 562 aaKnown RBP22.17■■□□□ 1.14
TSSC4-201ENST00000333256 STAG1Q8WVM7 1258 aa22.17■■□□□ 1.14
TSSC4-201ENST00000333256 MKNK2Q9HBH9 465 aa22.17■■□□□ 1.14
TSSC4-201ENST00000333256 HERC5Q9UII4 1024 aaKnown RBP22.17■■□□□ 1.14
TSSC4-201ENST00000333256 PDE4BQ07343 736 aa22.16■■□□□ 1.14
TSSC4-201ENST00000333256 COL9A3Q14050 684 aaPredicted RBP22.16■■□□□ 1.14
TSSC4-201ENST00000333256 ADCK5Q3MIX3 580 aa22.16■■□□□ 1.14
TSSC4-201ENST00000333256 SMC1BQ8NDV3 1235 aa22.16■■□□□ 1.14
TSSC4-201ENST00000333256 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.16■■□□□ 1.14
TSSC4-201ENST00000333256 NF2P35240 595 aa22.15■■□□□ 1.14
TSSC4-201ENST00000333256 RRP1BQ14684 758 aaKnown RBP22.15■■□□□ 1.14
TSSC4-201ENST00000333256 SHROOM1Q2M3G4 852 aaPredicted RBP22.15■■□□□ 1.14
TSSC4-201ENST00000333256 MOB2Q70IA6 237 aa22.15■■□□□ 1.14
TSSC4-201ENST00000333256 LAMA4Q16363 1823 aa22.15■■□□□ 1.14
TSSC4-201ENST00000333256 TBC1D12O60347 775 aa22.14■■□□□ 1.14
TSSC4-201ENST00000333256 RASA1P20936 1047 aa22.14■■□□□ 1.14
TSSC4-201ENST00000333256 DCAF15Q66K64 600 aa22.14■■□□□ 1.14
TSSC4-201ENST00000333256 KCNB2Q92953 911 aa22.14■■□□□ 1.14
TSSC4-201ENST00000333256 HOOK2Q96ED9 719 aa22.14■■□□□ 1.14
TSSC4-201ENST00000333256 SWAP70Q9UH65 585 aa22.14■■□□□ 1.14
TSSC4-201ENST00000333256 B4E1Z4 1266 aa22.14■■□□□ 1.13
TSSC4-201ENST00000333256 CELF2O95319 508 aaKnown RBP22.14■■□□□ 1.13
TSSC4-201ENST00000333256 GDF11O95390 407 aa22.14■■□□□ 1.13
TSSC4-201ENST00000333256 MAP3K10Q02779 954 aa22.14■■□□□ 1.13
TSSC4-201ENST00000333256 TTLL12Q14166 644 aaPredicted RBP22.14■■□□□ 1.13
TSSC4-201ENST00000333256 FAM47AQ5JRC9 791 aa22.14■■□□□ 1.13
TSSC4-201ENST00000333256 RBM46Q8TBY0 533 aaKnown RBP22.14■■□□□ 1.13
TSSC4-201ENST00000333256 RNF41Q9H4P4 317 aaPredicted RBP22.14■■□□□ 1.13
TSSC4-201ENST00000333256 RANBP6O60518 1105 aaKnown RBP22.13■■□□□ 1.13
TSSC4-201ENST00000333256 USP2O75604 605 aaPredicted RBP22.13■■□□□ 1.13
TSSC4-201ENST00000333256 TATDN1Q6P1N9 297 aa22.13■■□□□ 1.13
TSSC4-201ENST00000333256 WRNIP1Q96S55 665 aa22.13■■□□□ 1.13
TSSC4-201ENST00000333256 ZNF341Q9BYN7 854 aa22.13■■□□□ 1.13
TSSC4-201ENST00000333256 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.13■■□□□ 1.13
TSSC4-201ENST00000333256 PHF20L1A8MW92 1017 aa22.12■■□□□ 1.13
TSSC4-201ENST00000333256 PPP1R12BO60237 982 aaPredicted RBP22.12■■□□□ 1.13
TSSC4-201ENST00000333256 FGRP09769 529 aa22.12■■□□□ 1.13
TSSC4-201ENST00000333256 JAG1P78504 1218 aa22.12■■□□□ 1.13
TSSC4-201ENST00000333256 CERKLQ49MI3 558 aaPredicted RBP22.12■■□□□ 1.13
TSSC4-201ENST00000333256 JAKMIP1Q96N16 626 aaKnown RBP22.12■■□□□ 1.13
TSSC4-201ENST00000333256 ZNF287Q9HBT7 754 aa22.12■■□□□ 1.13
TSSC4-201ENST00000333256 ANGEL1Q9UNK9 670 aaKnown RBP22.12■■□□□ 1.13
TSSC4-201ENST00000333256 ORC4O43929 436 aa22.11■■□□□ 1.13
TSSC4-201ENST00000333256 KDM4AO75164 1064 aa22.11■■□□□ 1.13
TSSC4-201ENST00000333256 CPA1P15085 419 aa22.11■■□□□ 1.13
TSSC4-201ENST00000333256 AKR1B1P15121 316 aa22.11■■□□□ 1.13
TSSC4-201ENST00000333256 INPP5BP32019 993 aa22.11■■□□□ 1.13
TSSC4-201ENST00000333256 TRDNQ13061 729 aa22.11■■□□□ 1.13
TSSC4-201ENST00000333256 TSGA10IPQ3SY00 556 aa22.11■■□□□ 1.13
TSSC4-201ENST00000333256 CST9Q5W186 159 aa22.11■■□□□ 1.13
TSSC4-201ENST00000333256 ZNF444Q8N0Y2 327 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms