RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 POLR3DP05423 398 aaPredicted RBP22.15■■□□□ 1.14
EXOSC3-201ENST00000327304 CPA1P15085 419 aa22.15■■□□□ 1.14
EXOSC3-201ENST00000327304 PLCD1P51178 756 aa22.15■■□□□ 1.14
EXOSC3-201ENST00000327304 BLOC1S2Q6QNY1 142 aa22.15■■□□□ 1.14
EXOSC3-201ENST00000327304 HIRAP54198 1017 aaPredicted RBP22.15■■□□□ 1.14
EXOSC3-201ENST00000327304 ZSCAN31Q96LW9 406 aaPredicted RBP22.15■■□□□ 1.14
EXOSC3-201ENST00000327304 CNTNAP1P78357 1384 aa22.14■■□□□ 1.14
EXOSC3-201ENST00000327304 ENTPD3O75355 529 aa22.14■■□□□ 1.13
EXOSC3-201ENST00000327304 AKNAD1Q5T1N1 836 aa22.14■■□□□ 1.13
EXOSC3-201ENST00000327304 AMOTL1Q8IY63 956 aa22.14■■□□□ 1.13
EXOSC3-201ENST00000327304 ADARB2Q9NS39 739 aaKnown RBP22.14■■□□□ 1.13
EXOSC3-201ENST00000327304 NEDD4P46934 1319 aa22.14■■□□□ 1.13
EXOSC3-201ENST00000327304 RPS6KB1P23443 525 aa22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 ANKRD1Q15327 319 aa22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 FKBP1CQ5VVH2 108 aa22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 SH3BP5LQ7L8J4 393 aa22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 NKX2-3Q8TAU0 364 aa22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 STAG1Q8WVM7 1258 aa22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 TNPO1Q92973 898 aaKnown RBP22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 NEK1Q96PY6 1258 aa22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 ROBO3Q96MS0 1386 aa22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 MCM4P33991 863 aa22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 NOL8Q76FK4 1167 aaKnown RBP22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 DYNLL2Q96FJ2 89 aa22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 SH2B1Q9NRF2 756 aaPredicted RBP22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 HACL1Q9UJ83 578 aa22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 SCAF8Q9UPN6 1271 aaKnown RBP22.13■■□□□ 1.13
EXOSC3-201ENST00000327304 DDTLA6NHG4 134 aaPredicted RBP22.12■■□□□ 1.13
EXOSC3-201ENST00000327304 HMGB1P09429 215 aaKnown RBP22.11■■□□□ 1.13
EXOSC3-201ENST00000327304 CLEC17AQ6ZS10 378 aa22.11■■□□□ 1.13
EXOSC3-201ENST00000327304 MFSD6Q6ZSS7 791 aa22.11■■□□□ 1.13
EXOSC3-201ENST00000327304 GBP4Q96PP9 640 aa22.11■■□□□ 1.13
EXOSC3-201ENST00000327304 WDR90Q96KV7 1748 aa22.11■■□□□ 1.13
EXOSC3-201ENST00000327304 SIPA1L1O43166 1804 aa22.11■■□□□ 1.13
EXOSC3-201ENST00000327304 TTC6Q86TZ1 520 aa22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 ZSCAN29Q8IWY8 852 aaPredicted RBP22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 FAM151AQ8WW52 585 aa22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 ATRNL1Q5VV63 1379 aa22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 COL2A1P02458 1487 aaPredicted RBP22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 POTECB2RU33 542 aa22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 PRDM1O75626 825 aa22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 SLC3A2P08195 630 aaKnown RBP22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 ANGEL2Q5VTE6 544 aaKnown RBP22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 FAM83AQ86UY5 434 aa22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 MB21D2Q8IYB1 491 aaPredicted RBP22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 SLC44A5Q8NCS7 719 aa22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 NCOA7Q8NI08 942 aa22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 TMEM39BQ9GZU3 492 aa22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 RNF41Q9H4P4 317 aaPredicted RBP22.1■■□□□ 1.13
EXOSC3-201ENST00000327304 B4E1Z4 1266 aa22.09■■□□□ 1.13
EXOSC3-201ENST00000327304 FGRP09769 529 aa22.09■■□□□ 1.13
EXOSC3-201ENST00000327304 EPHX2P34913 555 aa22.09■■□□□ 1.13
EXOSC3-201ENST00000327304 RRP12Q5JTH9 1297 aaKnown RBP22.09■■□□□ 1.13
EXOSC3-201ENST00000327304 RALYLQ86SE5 291 aaKnown RBP22.09■■□□□ 1.13
EXOSC3-201ENST00000327304 CDAN1Q8IWY9 1227 aa22.09■■□□□ 1.13
EXOSC3-201ENST00000327304 TCEANC2Q96MN5 208 aa22.09■■□□□ 1.13
EXOSC3-201ENST00000327304 DHX36Q9H2U1 1008 aaKnown RBP22.09■■□□□ 1.13
EXOSC3-201ENST00000327304 TOMM22Q9NS69 142 aa22.09■■□□□ 1.13
EXOSC3-201ENST00000327304 GGA3Q9NZ52 723 aa22.09■■□□□ 1.13
EXOSC3-201ENST00000327304 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.09■■□□□ 1.13
EXOSC3-201ENST00000327304 SCN4AP35499 1836 aa22.09■■□□□ 1.13
EXOSC3-201ENST00000327304 HLA-DOAP06340 250 aa22.08■■□□□ 1.13
EXOSC3-201ENST00000327304 SLURP2P0DP57 97 aa22.08■■□□□ 1.13
EXOSC3-201ENST00000327304 TRDNQ13061 729 aa22.08■■□□□ 1.13
EXOSC3-201ENST00000327304 DDX11L8A8MPP1 907 aa22.08■■□□□ 1.12
EXOSC3-201ENST00000327304 GABPAQ06546 454 aa22.08■■□□□ 1.12
EXOSC3-201ENST00000327304 RASA3Q14644 834 aa22.08■■□□□ 1.12
EXOSC3-201ENST00000327304 C16orf86Q6ZW13 317 aa22.08■■□□□ 1.12
EXOSC3-201ENST00000327304 CNNM2Q9H8M5 875 aa22.08■■□□□ 1.12
EXOSC3-201ENST00000327304 ORC4O43929 436 aa22.07■■□□□ 1.12
EXOSC3-201ENST00000327304 TNNI2P48788 182 aa22.07■■□□□ 1.12
EXOSC3-201ENST00000327304 ANTXR2P58335 489 aa22.07■■□□□ 1.12
EXOSC3-201ENST00000327304 PDE4BQ07343 736 aa22.07■■□□□ 1.12
EXOSC3-201ENST00000327304 TNFAIP1Q13829 316 aa22.07■■□□□ 1.12
EXOSC3-201ENST00000327304 CYB5R4Q7L1T6 521 aa22.07■■□□□ 1.12
EXOSC3-201ENST00000327304 CHST3Q7LGC8 479 aa22.07■■□□□ 1.12
EXOSC3-201ENST00000327304 KRT23Q9C075 422 aa22.07■■□□□ 1.12
EXOSC3-201ENST00000327304 TAF1DQ9H5J8 278 aaPredicted RBP22.07■■□□□ 1.12
EXOSC3-201ENST00000327304 PGAP2Q9UHJ9 254 aa22.07■■□□□ 1.12
EXOSC3-201ENST00000327304 IQCA1LA6NCM1 817 aa22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 KDM4AO75164 1064 aa22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 PCP11498 1178 aaKnown RBP22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 CDK8P49336 464 aa22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 DHX32Q7L7V1 743 aaKnown RBP22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 CSRNP1Q96S65 589 aa22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 EHD4Q9H223 541 aa22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 PI4KBQ9UBF8 816 aa22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 SERPINB13Q9UIV8 391 aa22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 EXOSC10Q01780 885 aaKnown RBP22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 USP50Q70EL3 339 aaPredicted RBP22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 APOBEC3FQ8IUX4 373 aaKnown RBP22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 LRRC2Q9BYS8 371 aa22.06■■□□□ 1.12
EXOSC3-201ENST00000327304 FAM196BA6NMK8 535 aa22.05■■□□□ 1.12
EXOSC3-201ENST00000327304 PTMSP20962 102 aa22.05■■□□□ 1.12
EXOSC3-201ENST00000327304 TOB2Q14106 344 aaPredicted RBP22.05■■□□□ 1.12
EXOSC3-201ENST00000327304 DEFB129Q9H1M3 183 aa22.05■■□□□ 1.12
EXOSC3-201ENST00000327304 DNAJC18Q9H819 358 aa22.05■■□□□ 1.12
EXOSC3-201ENST00000327304 MKNK2Q9HBH9 465 aa22.05■■□□□ 1.12
EXOSC3-201ENST00000327304 ZSWIM5Q9P217 1185 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms