RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 BECN2A8MW95 431 aa24.77■■□□□ 1.56
LIMS2-201ENST00000324938 GNPATO15228 680 aa24.77■■□□□ 1.56
LIMS2-201ENST00000324938 MARCKSP29966 332 aaPredicted RBP24.77■■□□□ 1.56
LIMS2-201ENST00000324938 SEC23AQ15436 765 aa24.77■■□□□ 1.56
LIMS2-201ENST00000324938 DRC7Q8IY82 874 aa24.77■■□□□ 1.56
LIMS2-201ENST00000324938 STK11IPQ8N1F8 1099 aa24.77■■□□□ 1.56
LIMS2-201ENST00000324938 C17orf53Q8N3J3 647 aaPredicted RBP24.77■■□□□ 1.56
LIMS2-201ENST00000324938 ERCC4Q92889 916 aaPredicted RBP24.77■■□□□ 1.56
LIMS2-201ENST00000324938 A0A087WWV3 80 aa24.77■■□□□ 1.56
LIMS2-201ENST00000324938 ZPR1O75312 459 aa24.77■■□□□ 1.56
LIMS2-201ENST00000324938 CCDC186Q7Z3E2 898 aa24.77■■□□□ 1.56
LIMS2-201ENST00000324938 MRFAP1L1Q96HT8 127 aa24.77■■□□□ 1.56
LIMS2-201ENST00000324938 TIGD1Q96MW7 591 aa24.77■■□□□ 1.56
LIMS2-201ENST00000324938 ANKRD2Q9GZV1 360 aa24.77■■□□□ 1.56
LIMS2-201ENST00000324938 FAM237AA0A1B0GTK4 181 aa24.76■■□□□ 1.55
LIMS2-201ENST00000324938 MMP1P03956 469 aa24.76■■□□□ 1.55
LIMS2-201ENST00000324938 DYNLL1P63167 89 aaKnown RBP24.76■■□□□ 1.55
LIMS2-201ENST00000324938 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.76■■□□□ 1.55
LIMS2-201ENST00000324938 HPSEQ9Y251 543 aa24.76■■□□□ 1.55
LIMS2-201ENST00000324938 TNKSO95271 1327 aa24.76■■□□□ 1.55
LIMS2-201ENST00000324938 DEXIO95424 95 aa24.76■■□□□ 1.55
LIMS2-201ENST00000324938 KLRK1P26718 216 aa24.76■■□□□ 1.55
LIMS2-201ENST00000324938 GUCY1A2P33402 732 aa24.76■■□□□ 1.55
LIMS2-201ENST00000324938 NOSTRINQ8IVI9 506 aa24.76■■□□□ 1.55
LIMS2-201ENST00000324938 CRACR2BQ8N4Y2 399 aaPredicted RBP24.76■■□□□ 1.55
LIMS2-201ENST00000324938 FANCBQ8NB91 859 aa24.76■■□□□ 1.55
LIMS2-201ENST00000324938 CLIP2Q9UDT6 1046 aa24.76■■□□□ 1.55
LIMS2-201ENST00000324938 SLC3A2P08195 630 aaKnown RBP24.75■■□□□ 1.55
LIMS2-201ENST00000324938 PCP11498 1178 aaKnown RBP24.75■■□□□ 1.55
LIMS2-201ENST00000324938 BPIFA3Q9BQP9 254 aa24.75■■□□□ 1.55
LIMS2-201ENST00000324938 PPP2R5BQ15173 497 aa24.74■■□□□ 1.55
LIMS2-201ENST00000324938 SAFBQ15424 915 aaKnown RBP eCLIP24.74■■□□□ 1.55
LIMS2-201ENST00000324938 DNTTIP2Q5QJE6 756 aaKnown RBP24.74■■□□□ 1.55
LIMS2-201ENST00000324938 TPTE2Q6XPS3 522 aa24.74■■□□□ 1.55
LIMS2-201ENST00000324938 NSUN4Q96CB9 384 aaKnown RBP24.74■■□□□ 1.55
LIMS2-201ENST00000324938 CCNL1Q9UK58 526 aaPredicted RBP24.74■■□□□ 1.55
LIMS2-201ENST00000324938 TAOK2Q9UL54 1235 aa24.74■■□□□ 1.55
LIMS2-201ENST00000324938 RTCBQ9Y3I0 505 aaKnown RBP24.74■■□□□ 1.55
LIMS2-201ENST00000324938 FGRP09769 529 aa24.74■■□□□ 1.55
LIMS2-201ENST00000324938 SHC4Q6S5L8 630 aa24.74■■□□□ 1.55
LIMS2-201ENST00000324938 AOPEPQ8N6M6 819 aa24.74■■□□□ 1.55
LIMS2-201ENST00000324938 NRBP1Q9UHY1 535 aa24.74■■□□□ 1.55
LIMS2-201ENST00000324938 SYKP43405 635 aa24.73■■□□□ 1.55
LIMS2-201ENST00000324938 RBM6P78332 1123 aaKnown RBP24.73■■□□□ 1.55
LIMS2-201ENST00000324938 ZRSR1Q15695 479 aaKnown RBP24.73■■□□□ 1.55
LIMS2-201ENST00000324938 SMIM22K7EJ46 135 aa24.73■■□□□ 1.55
LIMS2-201ENST00000324938 ZBTB22O15209 634 aa24.73■■□□□ 1.55
LIMS2-201ENST00000324938 CUTAO60888 179 aa24.73■■□□□ 1.55
LIMS2-201ENST00000324938 HIBADHP31937 336 aaKnown RBP24.73■■□□□ 1.55
LIMS2-201ENST00000324938 DPCR1Q3MIW9 517 aa24.73■■□□□ 1.55
LIMS2-201ENST00000324938 RESP18Q5W5W9 173 aa24.73■■□□□ 1.55
LIMS2-201ENST00000324938 DIS3L2Q8IYB7 885 aaKnown RBP24.73■■□□□ 1.55
LIMS2-201ENST00000324938 NUP133Q8WUM0 1156 aa24.73■■□□□ 1.55
LIMS2-201ENST00000324938 FOXP1Q9H334 677 aaPredicted RBP24.73■■□□□ 1.55
LIMS2-201ENST00000324938 UQCRHLA0A096LP55 91 aa24.72■■□□□ 1.55
LIMS2-201ENST00000324938 UQCRHP07919 91 aa24.72■■□□□ 1.55
LIMS2-201ENST00000324938 ZSCAN10Q96SZ4 725 aaPredicted RBP24.72■■□□□ 1.55
LIMS2-201ENST00000324938 BTBD18B2RXH4 712 aa24.71■■□□□ 1.55
LIMS2-201ENST00000324938 NLRP12P59046 1061 aa24.71■■□□□ 1.55
LIMS2-201ENST00000324938 MECOMQ03112 1051 aa24.71■■□□□ 1.55
LIMS2-201ENST00000324938 ENAHQ8N8S7 591 aaPredicted RBP24.71■■□□□ 1.55
LIMS2-201ENST00000324938 RNF26Q9BY78 433 aaPredicted RBP24.71■■□□□ 1.55
LIMS2-201ENST00000324938 TMED8Q6PL24 325 aaPredicted RBP24.71■■□□□ 1.55
LIMS2-201ENST00000324938 KCNJ14Q9UNX9 436 aa24.71■■□□□ 1.55
LIMS2-201ENST00000324938 CYP2D7A0A087X1C5 515 aa24.7■■□□□ 1.54
LIMS2-201ENST00000324938 TM4SF1P30408 202 aa24.7■■□□□ 1.54
LIMS2-201ENST00000324938 CTR9Q6PD62 1173 aa24.7■■□□□ 1.54
LIMS2-201ENST00000324938 AMIGO3Q86WK7 504 aa24.7■■□□□ 1.54
LIMS2-201ENST00000324938 ARHGEF1Q92888 912 aaKnown RBP24.7■■□□□ 1.54
LIMS2-201ENST00000324938 USP21Q9UK80 565 aa24.7■■□□□ 1.54
LIMS2-201ENST00000324938 CMTR1Q8N1G2 835 aaKnown RBP24.7■■□□□ 1.54
LIMS2-201ENST00000324938 PRIMPOLQ96LW4 560 aa24.7■■□□□ 1.54
LIMS2-201ENST00000324938 TFCP2L1Q9NZI6 479 aa24.7■■□□□ 1.54
LIMS2-201ENST00000324938 IRS2Q9Y4H2 1338 aa24.69■■□□□ 1.54
LIMS2-201ENST00000324938 UBAP1LF5GYI3 381 aa24.69■■□□□ 1.54
LIMS2-201ENST00000324938 TOB1P50616 345 aaPredicted RBP24.69■■□□□ 1.54
LIMS2-201ENST00000324938 LRMPQ12912 555 aa24.69■■□□□ 1.54
LIMS2-201ENST00000324938 CCDC144BQ3MJ40 725 aa24.69■■□□□ 1.54
LIMS2-201ENST00000324938 RILPL1Q5EBL4 403 aa24.69■■□□□ 1.54
LIMS2-201ENST00000324938 CCDC82Q8N4S0 544 aa24.69■■□□□ 1.54
LIMS2-201ENST00000324938 FBXW7Q969H0 707 aa24.69■■□□□ 1.54
LIMS2-201ENST00000324938 TUBE1Q9UJT0 475 aa24.69■■□□□ 1.54
LIMS2-201ENST00000324938 CCDC24Q8N4L8 307 aa24.68■■□□□ 1.54
LIMS2-201ENST00000324938 KRI1Q8N9T8 703 aaKnown RBP24.68■■□□□ 1.54
LIMS2-201ENST00000324938 CLIC6Q96NY7 704 aa24.68■■□□□ 1.54
LIMS2-201ENST00000324938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.68■■□□□ 1.54
LIMS2-201ENST00000324938 IFIT1BQ5T764 474 aaKnown RBP24.68■■□□□ 1.54
LIMS2-201ENST00000324938 IQCA1Q86XH1 822 aa24.68■■□□□ 1.54
LIMS2-201ENST00000324938 CRNKL1Q9BZJ0 848 aaKnown RBP24.68■■□□□ 1.54
LIMS2-201ENST00000324938 USP17L12C9JPN9 530 aa24.67■■□□□ 1.54
LIMS2-201ENST00000324938 USP17L21D6R901 530 aa24.67■■□□□ 1.54
LIMS2-201ENST00000324938 ORC4O43929 436 aa24.67■■□□□ 1.54
LIMS2-201ENST00000324938 PRDX5P30044 214 aa24.67■■□□□ 1.54
LIMS2-201ENST00000324938 CATIPQ7Z7H3 387 aa24.67■■□□□ 1.54
LIMS2-201ENST00000324938 CACTINQ8WUQ7 758 aaKnown RBP24.67■■□□□ 1.54
LIMS2-201ENST00000324938 DCP1AQ9NPI6 582 aaPredicted RBP24.67■■□□□ 1.54
LIMS2-201ENST00000324938 ATP8A2Q9NTI2 1148 aa24.67■■□□□ 1.54
LIMS2-201ENST00000324938 RBM28Q9NW13 759 aaKnown RBP24.67■■□□□ 1.54
LIMS2-201ENST00000324938 BIN1O00499 593 aa24.66■■□□□ 1.54
LIMS2-201ENST00000324938 FUT2Q10981 343 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms