RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 TTLL6Q8N841 843 aa20.83■□□□□ 0.93
RAB39A-201ENST00000320578 GPT2Q8TD30 523 aa20.83■□□□□ 0.93
RAB39A-201ENST00000320578 TGFBRAP1Q8WUH2 860 aa20.83■□□□□ 0.93
RAB39A-201ENST00000320578 ZNF287Q9HBT7 754 aa20.83■□□□□ 0.93
RAB39A-201ENST00000320578 CNPY2Q9Y2B0 182 aa20.83■□□□□ 0.93
RAB39A-201ENST00000320578 DAGLAQ9Y4D2 1042 aa20.83■□□□□ 0.93
RAB39A-201ENST00000320578 DLEC1Q9Y238 1755 aa20.83■□□□□ 0.93
RAB39A-201ENST00000320578 ELP1O95163 1332 aa20.83■□□□□ 0.92
RAB39A-201ENST00000320578 RANBP6O60518 1105 aaKnown RBP20.83■□□□□ 0.92
RAB39A-201ENST00000320578 USP17L8P0C7I0 530 aa20.83■□□□□ 0.92
RAB39A-201ENST00000320578 IFNAR1P17181 557 aa20.83■□□□□ 0.92
RAB39A-201ENST00000320578 ADD1P35611 737 aaKnown RBP20.83■□□□□ 0.92
RAB39A-201ENST00000320578 HDLBPQ00341 1268 aaKnown RBP20.83■□□□□ 0.92
RAB39A-201ENST00000320578 SCAND2PQ9GZW5 306 aaPredicted RBP20.83■□□□□ 0.92
RAB39A-201ENST00000320578 CDC27P30260 824 aa20.82■□□□□ 0.92
RAB39A-201ENST00000320578 MICU3Q86XE3 530 aa20.82■□□□□ 0.92
RAB39A-201ENST00000320578 RTKN2Q8IZC4 609 aa20.82■□□□□ 0.92
RAB39A-201ENST00000320578 ENAHQ8N8S7 591 aaPredicted RBP20.82■□□□□ 0.92
RAB39A-201ENST00000320578 VPS33BQ9H267 617 aa20.82■□□□□ 0.92
RAB39A-201ENST00000320578 SMIM22K7EJ46 135 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 CALM1P0DP23 149 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 CALM2P0DP24 149 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 CALM3P0DP25 149 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 CYP2D6P10635 497 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 UBE2HP62256 183 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 ZNF654Q8IZM8 581 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 FBXO18Q8NFZ0 1043 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 ANKS1AQ92625 1134 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 TCP11L1Q9NUJ3 509 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 RTN1Q16799 776 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 FERMT3Q86UX7 667 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 C8orf76Q96K31 380 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 PSMD1Q99460 953 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 ZKSCAN3Q9BRR0 538 aa20.81■□□□□ 0.92
RAB39A-201ENST00000320578 TTF2Q9UNY4 1162 aaKnown RBP20.81■□□□□ 0.92
RAB39A-201ENST00000320578 FLT1P17948 1338 aa20.8■□□□□ 0.92
RAB39A-201ENST00000320578 DDAH1O94760 285 aa20.8■□□□□ 0.92
RAB39A-201ENST00000320578 IARSP41252 1262 aaKnown RBP20.8■□□□□ 0.92
RAB39A-201ENST00000320578 FOXD4L6Q3SYB3 417 aaPredicted RBP20.8■□□□□ 0.92
RAB39A-201ENST00000320578 CCDC93Q567U6 631 aa20.8■□□□□ 0.92
RAB39A-201ENST00000320578 IFIT1BQ5T764 474 aaKnown RBP20.8■□□□□ 0.92
RAB39A-201ENST00000320578 FOXD4L3Q6VB84 417 aaPredicted RBP20.8■□□□□ 0.92
RAB39A-201ENST00000320578 STK11IPQ8N1F8 1099 aa20.8■□□□□ 0.92
RAB39A-201ENST00000320578 KLHL34Q8N239 644 aa20.8■□□□□ 0.92
RAB39A-201ENST00000320578 FANCBQ8NB91 859 aa20.8■□□□□ 0.92
RAB39A-201ENST00000320578 WASF1Q92558 559 aa20.8■□□□□ 0.92
RAB39A-201ENST00000320578 GZF1Q9H116 711 aaPredicted RBP20.8■□□□□ 0.92
RAB39A-201ENST00000320578 KIF13BQ9NQT8 1826 aa20.79■□□□□ 0.92
RAB39A-201ENST00000320578 ECE2O60344 883 aa20.79■□□□□ 0.92
RAB39A-201ENST00000320578 FMNL1O95466 1100 aaPredicted RBP20.79■□□□□ 0.92
RAB39A-201ENST00000320578 POLR3DP05423 398 aaPredicted RBP20.79■□□□□ 0.92
RAB39A-201ENST00000320578 KCNA3P22001 575 aa20.79■□□□□ 0.92
RAB39A-201ENST00000320578 TGFB2P61812 414 aa20.79■□□□□ 0.92
RAB39A-201ENST00000320578 DACT2Q5SW24 774 aa20.79■□□□□ 0.92
RAB39A-201ENST00000320578 CATIPQ7Z7H3 387 aa20.79■□□□□ 0.92
RAB39A-201ENST00000320578 MAPKAPK5Q8IW41 473 aa20.79■□□□□ 0.92
RAB39A-201ENST00000320578 CFAP45Q9UL16 551 aa20.79■□□□□ 0.92
RAB39A-201ENST00000320578 FSD2A1L4K1 749 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 USP17L3A6NCW0 530 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 USP17L4A6NCW7 530 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 PRDM1O75626 825 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 SOGA3Q5TF21 947 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 USP17L1Q7RTZ2 530 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 DGKHQ86XP1 1220 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 RAB11FIP4Q86YS3 637 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 NAV1Q8NEY1 1877 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 TEKT1Q969V4 418 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 DBNDD1Q9H9R9 158 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 RBM28Q9NW13 759 aaKnown RBP20.78■□□□□ 0.92
RAB39A-201ENST00000320578 DDX60LQ5H9U9 1706 aaKnown RBP20.78■□□□□ 0.92
RAB39A-201ENST00000320578 SSRP1Q08945 709 aaKnown RBP20.78■□□□□ 0.92
RAB39A-201ENST00000320578 C16orf86Q6ZW13 317 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 FBXW7Q969H0 707 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 GDPD2Q9HCC8 539 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 TAOK2Q9UL54 1235 aa20.78■□□□□ 0.92
RAB39A-201ENST00000320578 TSPY2A6NKD2 308 aa20.77■□□□□ 0.92
RAB39A-201ENST00000320578 FIBPO43427 364 aa20.77■□□□□ 0.92
RAB39A-201ENST00000320578 ZNF445P59923 1031 aa20.77■□□□□ 0.92
RAB39A-201ENST00000320578 SYAP1Q96A49 352 aaPredicted RBP20.77■□□□□ 0.92
RAB39A-201ENST00000320578 ZDHHC15Q96MV8 337 aa20.77■□□□□ 0.92
RAB39A-201ENST00000320578 MAP3K14Q99558 947 aa20.77■□□□□ 0.92
RAB39A-201ENST00000320578 C21orf2O43822 256 aa20.76■□□□□ 0.91
RAB39A-201ENST00000320578 DPEP1P16444 411 aa20.76■□□□□ 0.91
RAB39A-201ENST00000320578 RXRAP19793 462 aa20.76■□□□□ 0.91
RAB39A-201ENST00000320578 TROAPQ12815 778 aa20.76■□□□□ 0.91
RAB39A-201ENST00000320578 BRAPQ7Z569 592 aa20.76■□□□□ 0.91
RAB39A-201ENST00000320578 TRIM22Q8IYM9 498 aa20.76■□□□□ 0.91
RAB39A-201ENST00000320578 ZNF396Q96N95 335 aaPredicted RBP20.76■□□□□ 0.91
RAB39A-201ENST00000320578 ALG1Q9BT22 464 aa20.76■□□□□ 0.91
RAB39A-201ENST00000320578 MYL10Q9BUA6 226 aa20.76■□□□□ 0.91
RAB39A-201ENST00000320578 MTFR1LQ9H019 292 aa20.76■□□□□ 0.91
RAB39A-201ENST00000320578 MKNK2Q9HBH9 465 aa20.76■□□□□ 0.91
RAB39A-201ENST00000320578 GADD45BO75293 160 aaPredicted RBP20.76■□□□□ 0.91
RAB39A-201ENST00000320578 PLCD1P51178 756 aa20.76■□□□□ 0.91
RAB39A-201ENST00000320578 EVX2Q03828 476 aa20.76■□□□□ 0.91
RAB39A-201ENST00000320578 CAVIN1Q6NZI2 390 aaKnown RBP20.76■□□□□ 0.91
RAB39A-201ENST00000320578 ZNF444Q8N0Y2 327 aaPredicted RBP20.76■□□□□ 0.91
RAB39A-201ENST00000320578 CRACR2BQ8N4Y2 399 aaPredicted RBP20.76■□□□□ 0.91
RAB39A-201ENST00000320578 NPM3O75607 178 aaKnown RBP20.75■□□□□ 0.91
RAB39A-201ENST00000320578 POLD1P28340 1107 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms