RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 SLX4Q8IY92 1834 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 NPR1P16066 1061 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 ATP2B1P20020 1258 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 ATP2B4P23634 1241 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 SEC23AQ15436 765 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 SP8Q8IXZ3 490 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 UBAC1Q9BSL1 405 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 ZC3H12CQ9C0D7 883 aaKnown RBP8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 DAGLAQ9Y4D2 1042 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 NR1I2O75469 434 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 GOLGA8HP0CJ92 632 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 RHBDL3P58872 404 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 TCP10Q12799 353 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 NR5A1Q13285 461 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 ZNF654Q8IZM8 581 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 C8orf76Q96K31 380 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 SPATA32Q96LK8 384 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 ALG1Q9BT22 464 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 CRNKL1Q9BZJ0 848 aaKnown RBP8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 TTF2Q9UNY4 1162 aaKnown RBP8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 BRCA2P51587 3418 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 ZMYM6O95789 1325 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 GNAT2P19087 354 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 WDR66Q8TBY9 1149 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 MASTLQ96GX5 879 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 ZSCAN10Q96SZ4 725 aaPredicted RBP8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 GOLPH3LQ9H4A5 285 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 PODXL2Q9NZ53 605 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 WNT7AO00755 349 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 SEMA3EO15041 775 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 MARCKSP29966 332 aaPredicted RBP8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 EARS2Q5JPH6 523 aaKnown RBP8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 RCSD1Q6JBY9 416 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 STAG2Q8N3U4 1231 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 STK32BQ9NY57 414 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 MROH7-TTC4A0A0A0MT08 1334 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 TFAP4Q01664 338 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 SKOR2Q2VWA4 1001 aaPredicted RBP8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 SPECC1Q5M775 1068 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 FBXO18Q8NFZ0 1043 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 PDCP20941 246 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 KRT85P78386 507 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 SLC35G1Q2M3R5 365 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 KRT40Q6A162 431 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 TEX11Q8IYF3 940 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 DACT1Q9NYF0 836 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 VPS54Q9P1Q0 977 aa8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.17□□□□□ -1.1
LYSMD3-201ENST00000315948 SHTN1A0MZ66 631 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 PSDA5PKW4 1024 aaPredicted RBP8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 TSPY2A6NKD2 308 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 BTBD18B2RXH4 712 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 H0YIN7 160 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 PDE6BP35913 854 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 SGMS1Q86VZ5 419 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 ESR2Q92731 530 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 KRT23Q9C075 422 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 ZNF277Q9NRM2 450 aaPredicted RBP8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 ZBTB12Q9Y330 459 aaPredicted RBP8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 FLT1P17948 1338 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 YDJCA8MPS7 323 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 IFIT1BQ5T764 474 aaKnown RBP8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 C12orf60Q5U649 245 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 FBXL16Q8N461 479 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 FANCBQ8NB91 859 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 LLPHQ9BRT6 129 aaKnown RBP8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 STX8Q9UNK0 236 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 SCN9AQ15858 1988 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 DPEP1P16444 411 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 UBE2HP62256 183 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 GRIN1Q05586 938 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 TROAPQ12815 778 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 RTN1Q16799 776 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 TICAM2Q86XR7 235 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 CDAN1Q8IWY9 1227 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 TMEM87BQ96K49 555 aa8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 V9GY48 417 aaPredicted RBP8.16□□□□□ -1.1
LYSMD3-201ENST00000315948 G3V3G9 751 aa8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 RAD17O75943 681 aa8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 IARSP41252 1262 aaKnown RBP8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 KIF23Q02241 960 aaPredicted RBP8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 DCAF8Q5TAQ9 597 aa8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 ANAPC4Q9UJX5 808 aa8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 LIFRP42702 1097 aa8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 RBM5P52756 815 aaKnown RBP eCLIP8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 SRBD1Q8N5C6 995 aaKnown RBP8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 TMEM87AQ8NBN3 555 aa8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 CLIC6Q96NY7 704 aa8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 CNNM2Q9H8M5 875 aa8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.15□□□□□ -1.1
LYSMD3-201ENST00000315948 A0A1B0GVL5 298 aa8.15□□□□□ -1.11
LYSMD3-201ENST00000315948 ECE2O60344 883 aa8.15□□□□□ -1.11
LYSMD3-201ENST00000315948 WDHD1O75717 1129 aaPredicted RBP8.15□□□□□ -1.11
LYSMD3-201ENST00000315948 KCNA3P22001 575 aa8.15□□□□□ -1.11
LYSMD3-201ENST00000315948 HMGN5P82970 282 aaKnown RBP8.15□□□□□ -1.11
LYSMD3-201ENST00000315948 BICD2Q8TD16 824 aa8.15□□□□□ -1.11
LYSMD3-201ENST00000315948 C7orf43Q8WVR3 580 aa8.15□□□□□ -1.11
LYSMD3-201ENST00000315948 GPKOWQ92917 476 aaPredicted RBP eCLIP8.15□□□□□ -1.11
LYSMD3-201ENST00000315948 LTBP1Q14766 1721 aa8.15□□□□□ -1.11
LYSMD3-201ENST00000315948 GPR75-ASB3A0A0A6YYF3 556 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 1033.8 ms