RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 EHD4Q9H223 541 aa10.31□□□□□ -0.76
MSL3-201ENST00000312196 ZBTB40Q9NUA8 1239 aa10.31□□□□□ -0.76
MSL3-201ENST00000312196 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.31□□□□□ -0.76
MSL3-201ENST00000312196 DDX60LQ5H9U9 1706 aaKnown RBP10.31□□□□□ -0.76
MSL3-201ENST00000312196 PABPC4Q13310 644 aaKnown RBP eCLIP10.3□□□□□ -0.76
MSL3-201ENST00000312196 SLC4A8Q2Y0W8 1093 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 NAA16Q6N069 864 aaPredicted RBP10.3□□□□□ -0.76
MSL3-201ENST00000312196 GPR153Q6NV75 609 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 ZFPM1Q8IX07 1006 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 PRO3102Q9H379 93 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 DDX4Q9NQI0 724 aaKnown RBP10.3□□□□□ -0.76
MSL3-201ENST00000312196 PI4KBQ9UBF8 816 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 ABCF2Q9UG63 623 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 PDHXO00330 501 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 GRK4P32298 578 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 FXR1P51114 621 aaKnown RBP eCLIP10.3□□□□□ -0.76
MSL3-201ENST00000312196 CAP1Q01518 475 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.3□□□□□ -0.76
MSL3-201ENST00000312196 CNKSR2Q8WXI2 1034 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 CLUAP1Q96AJ1 413 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 DBNDD2Q9BQY9 259 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 AS3MTQ9HBK9 375 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 RAI14Q9P0K7 980 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 LRP2BPQ9P2M1 347 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 MGAMO43451 1857 aa10.3□□□□□ -0.76
MSL3-201ENST00000312196 DDTLA6NHG4 134 aaPredicted RBP10.29□□□□□ -0.76
MSL3-201ENST00000312196 CYP2E1P05181 493 aaPredicted RBP10.29□□□□□ -0.76
MSL3-201ENST00000312196 OSBPP22059 807 aa10.29□□□□□ -0.76
MSL3-201ENST00000312196 OS9Q13438 667 aaPredicted RBP10.29□□□□□ -0.76
MSL3-201ENST00000312196 TEX11Q8IYF3 940 aa10.29□□□□□ -0.76
MSL3-201ENST00000312196 KIF1BPQ96EK5 621 aa10.29□□□□□ -0.76
MSL3-201ENST00000312196 DBNLQ9UJU6 430 aaKnown RBP10.29□□□□□ -0.76
MSL3-201ENST00000312196 PNMA3Q9UL41 463 aa10.29□□□□□ -0.76
MSL3-201ENST00000312196 AGTPBP1Q9UPW5 1226 aa10.29□□□□□ -0.76
MSL3-201ENST00000312196 NR2E3Q9Y5X4 410 aa10.29□□□□□ -0.76
MSL3-201ENST00000312196 CAP2P40123 477 aa10.29□□□□□ -0.76
MSL3-201ENST00000312196 PSMC4P43686 418 aa10.29□□□□□ -0.76
MSL3-201ENST00000312196 GCLCP48506 637 aaPredicted RBP10.29□□□□□ -0.76
MSL3-201ENST00000312196 TCP10Q12799 353 aa10.29□□□□□ -0.76
MSL3-201ENST00000312196 TRMT44Q8IYL2 757 aaKnown RBP10.29□□□□□ -0.76
MSL3-201ENST00000312196 EAF2Q96CJ1 260 aaPredicted RBP10.29□□□□□ -0.76
MSL3-201ENST00000312196 PDE4DIPQ5VU43 2346 aa10.28□□□□□ -0.76
MSL3-201ENST00000312196 MYPNQ86TC9 1320 aa10.28□□□□□ -0.76
MSL3-201ENST00000312196 C19orf81C9J6K1 198 aa10.28□□□□□ -0.76
MSL3-201ENST00000312196 MIGA2Q7L4E1 593 aa10.28□□□□□ -0.76
MSL3-201ENST00000312196 SHISA4Q96DD7 197 aa10.28□□□□□ -0.76
MSL3-201ENST00000312196 CRISPLD2Q9H0B8 497 aa10.28□□□□□ -0.76
MSL3-201ENST00000312196 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.28□□□□□ -0.76
MSL3-201ENST00000312196 AK9Q5TCS8 1911 aa10.28□□□□□ -0.76
MSL3-201ENST00000312196 USP17L5A8MUK1 530 aa10.28□□□□□ -0.76
MSL3-201ENST00000312196 MAP3K12Q12852 859 aa10.28□□□□□ -0.76
MSL3-201ENST00000312196 RHPN1Q8TCX5 695 aa10.28□□□□□ -0.76
MSL3-201ENST00000312196 RAET1EQ8TD07 263 aa10.28□□□□□ -0.76
MSL3-201ENST00000312196 RCAN3Q9UKA8 241 aa10.28□□□□□ -0.76
MSL3-201ENST00000312196 HOXA7P31268 230 aaPredicted RBP10.27□□□□□ -0.77
MSL3-201ENST00000312196 BMP8BP34820 402 aa10.27□□□□□ -0.77
MSL3-201ENST00000312196 SH3RF3Q8TEJ3 882 aaPredicted RBP10.27□□□□□ -0.77
MSL3-201ENST00000312196 C12orf42Q96LP6 360 aa10.27□□□□□ -0.77
MSL3-201ENST00000312196 PIH1D3Q9NQM4 214 aaKnown RBP10.27□□□□□ -0.77
MSL3-201ENST00000312196 MORF4L1Q9UBU8 362 aa10.27□□□□□ -0.77
MSL3-201ENST00000312196 SGPL1O95470 568 aa10.27□□□□□ -0.77
MSL3-201ENST00000312196 ASNSP08243 561 aa10.27□□□□□ -0.77
MSL3-201ENST00000312196 CCL5P13501 91 aa10.27□□□□□ -0.77
MSL3-201ENST00000312196 ZAP70P43403 619 aa10.27□□□□□ -0.77
MSL3-201ENST00000312196 TATDN1Q6P1N9 297 aa10.27□□□□□ -0.77
MSL3-201ENST00000312196 TICAM2Q86XR7 235 aa10.27□□□□□ -0.77
MSL3-201ENST00000312196 ZNF280CQ8ND82 737 aa10.27□□□□□ -0.77
MSL3-201ENST00000312196 ZHX2Q9Y6X8 837 aa10.27□□□□□ -0.77
MSL3-201ENST00000312196 HLA-DOAP06340 250 aa10.26□□□□□ -0.77
MSL3-201ENST00000312196 ATP5JP18859 108 aa10.26□□□□□ -0.77
MSL3-201ENST00000312196 FAM110CQ1W6H9 321 aa10.26□□□□□ -0.77
MSL3-201ENST00000312196 ZSCAN29Q8IWY8 852 aaPredicted RBP10.26□□□□□ -0.77
MSL3-201ENST00000312196 CLASRPQ8N2M8 674 aaKnown RBP10.26□□□□□ -0.77
MSL3-201ENST00000312196 FLT1P17948 1338 aa10.26□□□□□ -0.77
MSL3-201ENST00000312196 MYH1P12882 1939 aa10.26□□□□□ -0.77
MSL3-201ENST00000312196 FMNL1O95466 1100 aaPredicted RBP10.25□□□□□ -0.77
MSL3-201ENST00000312196 TBC1D9Q6ZT07 1266 aa10.25□□□□□ -0.77
MSL3-201ENST00000312196 TTC6Q86TZ1 520 aa10.25□□□□□ -0.77
MSL3-201ENST00000312196 PAK6Q9NQU5 681 aaPredicted RBP10.25□□□□□ -0.77
MSL3-201ENST00000312196 CTGFP29279 349 aa10.25□□□□□ -0.77
MSL3-201ENST00000312196 AAMPQ13685 434 aa10.25□□□□□ -0.77
MSL3-201ENST00000312196 PI16Q6UXB8 463 aa10.25□□□□□ -0.77
MSL3-201ENST00000312196 PANK1Q8TE04 598 aa10.25□□□□□ -0.77
MSL3-201ENST00000312196 CPA4Q9UI42 421 aa10.25□□□□□ -0.77
MSL3-201ENST00000312196 COLQQ9Y215 455 aaPredicted RBP10.25□□□□□ -0.77
MSL3-201ENST00000312196 NAV1Q8NEY1 1877 aa10.25□□□□□ -0.77
MSL3-201ENST00000312196 H0YGN5 161 aa10.24□□□□□ -0.77
MSL3-201ENST00000312196 CYP7A1P22680 504 aa10.24□□□□□ -0.77
MSL3-201ENST00000312196 AACSQ86V21 672 aa10.24□□□□□ -0.77
MSL3-201ENST00000312196 SIRT2Q8IXJ6 389 aa10.24□□□□□ -0.77
MSL3-201ENST00000312196 COA7Q96BR5 231 aa10.24□□□□□ -0.77
MSL3-201ENST00000312196 ARHGAP39Q9C0H5 1083 aa10.24□□□□□ -0.77
MSL3-201ENST00000312196 MYO5AQ9Y4I1 1855 aaKnown RBP10.24□□□□□ -0.77
MSL3-201ENST00000312196 FARP2O94887 1054 aaPredicted RBP10.24□□□□□ -0.77
MSL3-201ENST00000312196 PICALMQ13492 652 aa10.24□□□□□ -0.77
MSL3-201ENST00000312196 USP17L2Q6R6M4 530 aa10.24□□□□□ -0.77
MSL3-201ENST00000312196 LBX2Q6XYB7 198 aa10.24□□□□□ -0.77
MSL3-201ENST00000312196 SH3TC2Q8TF17 1288 aa10.24□□□□□ -0.77
MSL3-201ENST00000312196 RIOK1Q9BRS2 568 aaKnown RBP10.24□□□□□ -0.77
MSL3-201ENST00000312196 C1orf115Q9H7X2 142 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms