RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 ERMNQ8TAM6 284 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 CWF19L2Q2TBE0 894 aaKnown RBP12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 FAM200AQ8TCP9 573 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 MPHOSPH6Q99547 160 aaKnown RBP12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 RNF40O75150 1001 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 DBNLQ9UJU6 430 aaKnown RBP12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 TROVE2P10155 538 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 TRIM6Q9C030 488 aaPredicted RBP12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 GLRX3O76003 335 aaKnown RBP12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 RPAP2Q8IXW5 612 aaPredicted RBP12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 KIF1BO60333 1816 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 S100BP04271 92 aaPredicted RBP12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 RPRD2Q5VT52 1461 aaKnown RBP12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 HNRNPCP07910 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 ST13P4Q8IZP2 240 aaPredicted RBP12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 IMPG2Q9BZV3 1241 aa12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 FAM13AO94988 1023 aa12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 MCM7P33993 719 aa12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 PMS1P54277 932 aaKnown RBP12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 SH2D4AQ9H788 454 aa12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 PSMA7O14818 248 aa12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 KIF1CO43896 1103 aaKnown RBP12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 IDEP14735 1019 aa12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 GTPBP10A4D1E9 387 aaKnown RBP12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 DDIT3P35638 169 aa12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 LIG3P49916 1009 aa12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 MTMR3Q13615 1198 aa12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 CASC4Q6P4E1 433 aa12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 ABCC5O15440 1437 aa12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 NMIQ13287 307 aaPredicted RBP12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 ANGPTL3Q9Y5C1 460 aa12.38□□□□□ -0.43
HDGFL3-201ENST00000299633 DYNC1I2Q13409 638 aaKnown RBP12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 KRT80Q6KB66 452 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 HSPA8P11142 646 aaKnown RBP12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 NBPF10Q6P3W6 841 aaKnown RBP12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 NAPGQ99747 312 aaPredicted RBP12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 MUM1L1Q5H9M0 696 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 RRAGBQ5VZM2 374 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 JADE1Q6IE81 842 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 PBRM1Q86U86 1689 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 KRT8P05787 483 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 EVI5LQ96CN4 794 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 DAB2P98082 770 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 BICDL1Q6ZP65 573 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 HMGB3O15347 200 aaKnown RBP12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 RGS16O15492 202 aaPredicted RBP12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 PPP2R5CQ13362 524 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 TXLNGQ9NUQ3 528 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 METTL24Q5JXM2 366 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 UBE3BQ7Z3V4 1068 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 NOC2LQ9Y3T9 749 aaKnown RBP12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 RALGAPBQ86X10 1494 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 PPFIA4O75335 1185 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 CCDC117Q8IWD4 279 aaPredicted RBP12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 SKIP12755 728 aa12.37□□□□□ -0.43
HDGFL3-201ENST00000299633 KRT14P02533 472 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 JPH2Q9BR39 696 aaPredicted RBP12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 SCAF11Q99590 1463 aaKnown RBP12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 GOLGA8QA0A0J9YX86 632 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 GOLGA8OA6NCC3 632 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 GOLGA8NF8WBI6 632 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 TTC22Q5TAA0 569 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 USHBP1Q8N6Y0 703 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 P3H4Q92791 437 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 ZSCAN16Q9H4T2 348 aaPredicted RBP12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 HAUS2Q9NVX0 235 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 MKNK2Q9HBH9 465 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 MPDZO75970 2070 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 PSMC1P62191 440 aaKnown RBP12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 CHD4Q14839 1912 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 KRT4P19013 534 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 SPTBP11277 2137 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 KRT7P08729 469 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 SIRT1Q96EB6 747 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 EFHD1Q9BUP0 239 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 ZSCAN22P10073 491 aaPredicted RBP12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 NXNQ6DKJ4 435 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 CA8P35219 290 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 DNM1Q05193 864 aaKnown RBP12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 TRPA1O75762 1119 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 LMOD1P29536 600 aaPredicted RBP12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 APLFQ8IW19 511 aaPredicted RBP12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 ANKRD35Q8N283 1001 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 MAD1L1Q9Y6D9 718 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 SESN1Q9Y6P5 492 aa12.36□□□□□ -0.43
HDGFL3-201ENST00000299633 hCG_2014768A0A024R1R8 64 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 MCF2P10911 925 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 GLE1Q53GS7 698 aaKnown RBP12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 NAPBQ9H115 298 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 ANGPTL2Q9UKU9 493 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 RHOBTB1O94844 696 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 TBC1D8O95759 1140 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 NECAB1Q8N987 351 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 ESYT2A0FGR8 921 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 BMP2KLQ5H9B9 411 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 EFCAB13Q8IY85 973 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms