RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 BRF1Q92994 677 aa26.76■■□□□ 1.88
UFD1-201ENST00000263202 DYNLL2Q96FJ2 89 aa26.76■■□□□ 1.88
UFD1-201ENST00000263202 MYOZ2Q9NPC6 264 aa26.76■■□□□ 1.88
UFD1-201ENST00000263202 SRCAPQ6ZRS2 3230 aa26.76■■□□□ 1.87
UFD1-201ENST00000263202 LARGE1O95461 756 aa26.76■■□□□ 1.87
UFD1-201ENST00000263202 PDE4BQ07343 736 aa26.76■■□□□ 1.87
UFD1-201ENST00000263202 ESR2Q92731 530 aa26.76■■□□□ 1.87
UFD1-201ENST00000263202 ZSCAN31Q96LW9 406 aaPredicted RBP26.76■■□□□ 1.87
UFD1-201ENST00000263202 PRDM1O75626 825 aa26.75■■□□□ 1.87
UFD1-201ENST00000263202 CUL4AQ13619 759 aa26.75■■□□□ 1.87
UFD1-201ENST00000263202 SIPA1L1O43166 1804 aa26.75■■□□□ 1.87
UFD1-201ENST00000263202 ZFPM1Q8IX07 1006 aa26.74■■□□□ 1.87
UFD1-201ENST00000263202 MICALL2Q8IY33 904 aa26.74■■□□□ 1.87
UFD1-201ENST00000263202 GPC2Q8N158 579 aa26.74■■□□□ 1.87
UFD1-201ENST00000263202 GPHNQ9NQX3 736 aaPredicted RBP26.74■■□□□ 1.87
UFD1-201ENST00000263202 CNOT7Q9UIV1 285 aaKnown RBP26.74■■□□□ 1.87
UFD1-201ENST00000263202 MYH8P13535 1937 aa26.74■■□□□ 1.87
UFD1-201ENST00000263202 HSP90AA1P07900 732 aaKnown RBP26.74■■□□□ 1.87
UFD1-201ENST00000263202 ME3Q16798 604 aa26.74■■□□□ 1.87
UFD1-201ENST00000263202 TTC6Q86TZ1 520 aa26.74■■□□□ 1.87
UFD1-201ENST00000263202 TMEM87BQ96K49 555 aa26.74■■□□□ 1.87
UFD1-201ENST00000263202 SH2B1Q9NRF2 756 aaPredicted RBP26.74■■□□□ 1.87
UFD1-201ENST00000263202 ZNF70Q9UC06 446 aaPredicted RBP26.74■■□□□ 1.87
UFD1-201ENST00000263202 TCP10Q12799 353 aa26.73■■□□□ 1.87
UFD1-201ENST00000263202 SPDYE2Q495Y8 402 aa26.73■■□□□ 1.87
UFD1-201ENST00000263202 C9orf131Q5VYM1 1079 aa26.73■■□□□ 1.87
UFD1-201ENST00000263202 C16orf86Q6ZW13 317 aa26.73■■□□□ 1.87
UFD1-201ENST00000263202 UTRNP46939 3433 aa26.73■■□□□ 1.87
UFD1-201ENST00000263202 CLRN2A0PK11 232 aa26.72■■□□□ 1.87
UFD1-201ENST00000263202 WNT10BO00744 389 aa26.72■■□□□ 1.87
UFD1-201ENST00000263202 ENTPD3O75355 529 aa26.72■■□□□ 1.87
UFD1-201ENST00000263202 APOBRQ0VD83 1088 aa26.72■■□□□ 1.87
UFD1-201ENST00000263202 IGDCC4Q8TDY8 1250 aa26.72■■□□□ 1.87
UFD1-201ENST00000263202 FOXD4L1Q9NU39 408 aa26.72■■□□□ 1.87
UFD1-201ENST00000263202 TMOD2Q9NZR1 351 aa26.72■■□□□ 1.87
UFD1-201ENST00000263202 SH2B2O14492 632 aaPredicted RBP26.72■■□□□ 1.87
UFD1-201ENST00000263202 RANBP6O60518 1105 aaKnown RBP26.72■■□□□ 1.87
UFD1-201ENST00000263202 MTA3Q9BTC8 594 aa26.72■■□□□ 1.87
UFD1-201ENST00000263202 NBPF9Q3BBW0 867 aa26.71■■□□□ 1.87
UFD1-201ENST00000263202 SLC44A5Q8NCS7 719 aa26.71■■□□□ 1.87
UFD1-201ENST00000263202 DHX36Q9H2U1 1008 aaKnown RBP26.71■■□□□ 1.87
UFD1-201ENST00000263202 ANGEL1Q9UNK9 670 aaKnown RBP26.71■■□□□ 1.87
UFD1-201ENST00000263202 COL2A1P02458 1487 aaPredicted RBP26.7■■□□□ 1.87
UFD1-201ENST00000263202 GRIN3BO60391 1043 aa26.7■■□□□ 1.87
UFD1-201ENST00000263202 EGFRP00533 1210 aa26.7■■□□□ 1.87
UFD1-201ENST00000263202 CDK8P49336 464 aa26.7■■□□□ 1.87
UFD1-201ENST00000263202 EVCP57679 992 aa26.7■■□□□ 1.87
UFD1-201ENST00000263202 GABPAQ06546 454 aa26.7■■□□□ 1.87
UFD1-201ENST00000263202 MKNK2Q9HBH9 465 aa26.7■■□□□ 1.87
UFD1-201ENST00000263202 IFIT3O14879 490 aaKnown RBP26.69■■□□□ 1.86
UFD1-201ENST00000263202 MYO1BO43795 1136 aa26.69■■□□□ 1.86
UFD1-201ENST00000263202 NT5C2P49902 561 aa26.69■■□□□ 1.86
UFD1-201ENST00000263202 SH3BP5LQ7L8J4 393 aa26.69■■□□□ 1.86
UFD1-201ENST00000263202 ZKSCAN3Q9BRR0 538 aa26.69■■□□□ 1.86
UFD1-201ENST00000263202 SLKQ9H2G2 1235 aaPredicted RBP26.69■■□□□ 1.86
UFD1-201ENST00000263202 ZNF287Q9HBT7 754 aa26.69■■□□□ 1.86
UFD1-201ENST00000263202 DDTLA6NHG4 134 aaPredicted RBP26.69■■□□□ 1.86
UFD1-201ENST00000263202 HLA-DOAP06340 250 aa26.69■■□□□ 1.86
UFD1-201ENST00000263202 TMEM67Q5HYA8 995 aa26.69■■□□□ 1.86
UFD1-201ENST00000263202 RBM26Q5T8P6 1007 aaKnown RBP26.69■■□□□ 1.86
UFD1-201ENST00000263202 SAMD7Q7Z3H4 446 aa26.69■■□□□ 1.86
UFD1-201ENST00000263202 INTS4Q96HW7 963 aaKnown RBP26.69■■□□□ 1.86
UFD1-201ENST00000263202 LY9Q9HBG7 655 aa26.69■■□□□ 1.86
UFD1-201ENST00000263202 GPRC5DQ9NZD1 345 aa26.69■■□□□ 1.86
UFD1-201ENST00000263202 ATRNL1Q5VV63 1379 aa26.68■■□□□ 1.86
UFD1-201ENST00000263202 TCP10L2B9ZVM9 353 aa26.68■■□□□ 1.86
UFD1-201ENST00000263202 ST3GAL1Q11201 340 aa26.68■■□□□ 1.86
UFD1-201ENST00000263202 FAM47AQ5JRC9 791 aa26.68■■□□□ 1.86
UFD1-201ENST00000263202 FKBP1CQ5VVH2 108 aa26.68■■□□□ 1.86
UFD1-201ENST00000263202 SERPINB13Q9UIV8 391 aa26.68■■□□□ 1.86
UFD1-201ENST00000263202 RASA1P20936 1047 aa26.67■■□□□ 1.86
UFD1-201ENST00000263202 LIFRP42702 1097 aa26.67■■□□□ 1.86
UFD1-201ENST00000263202 SART3Q15020 963 aaKnown RBP26.67■■□□□ 1.86
UFD1-201ENST00000263202 NECAB1Q8N987 351 aa26.67■■□□□ 1.86
UFD1-201ENST00000263202 ZNF274Q96GC6 653 aaPredicted RBP26.67■■□□□ 1.86
UFD1-201ENST00000263202 UBAC1Q9BSL1 405 aa26.67■■□□□ 1.86
UFD1-201ENST00000263202 EHD4Q9H223 541 aa26.67■■□□□ 1.86
UFD1-201ENST00000263202 SENP2Q9HC62 589 aa26.67■■□□□ 1.86
UFD1-201ENST00000263202 BRPF3Q9ULD4 1205 aa26.67■■□□□ 1.86
UFD1-201ENST00000263202 CNTNAP1P78357 1384 aa26.67■■□□□ 1.86
UFD1-201ENST00000263202 H7C1D1 291 aa26.67■■□□□ 1.86
UFD1-201ENST00000263202 DDNO94850 711 aaPredicted RBP26.67■■□□□ 1.86
UFD1-201ENST00000263202 STK3Q13188 491 aa26.67■■□□□ 1.86
UFD1-201ENST00000263202 TBC1D10BQ4KMP7 808 aaPredicted RBP26.67■■□□□ 1.86
UFD1-201ENST00000263202 CCDC83Q8IWF9 413 aa26.67■■□□□ 1.86
UFD1-201ENST00000263202 ZNF444Q8N0Y2 327 aaPredicted RBP26.67■■□□□ 1.86
UFD1-201ENST00000263202 VEZTQ9HBM0 779 aa26.67■■□□□ 1.86
UFD1-201ENST00000263202 TSPY2A6NKD2 308 aa26.66■■□□□ 1.86
UFD1-201ENST00000263202 SEC23AQ15436 765 aa26.66■■□□□ 1.86
UFD1-201ENST00000263202 KIF4BQ2VIQ3 1234 aa26.66■■□□□ 1.86
UFD1-201ENST00000263202 SGMS1Q86VZ5 419 aa26.66■■□□□ 1.86
UFD1-201ENST00000263202 IQCA1Q86XH1 822 aa26.66■■□□□ 1.86
UFD1-201ENST00000263202 ZSCAN29Q8IWY8 852 aaPredicted RBP26.66■■□□□ 1.86
UFD1-201ENST00000263202 FAM151AQ8WW52 585 aa26.66■■□□□ 1.86
UFD1-201ENST00000263202 ZSCAN10Q96SZ4 725 aaPredicted RBP26.66■■□□□ 1.86
UFD1-201ENST00000263202 TNKSO95271 1327 aa26.66■■□□□ 1.86
UFD1-201ENST00000263202 KLF18A0A0U1RQI7 1052 aa26.65■■□□□ 1.86
UFD1-201ENST00000263202 ERICH2A1L162 156 aa26.65■■□□□ 1.86
UFD1-201ENST00000263202 PDIA3P30101 505 aaKnown RBP26.65■■□□□ 1.86
UFD1-201ENST00000263202 DDIT3P35638 169 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms