RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 REC8O95072 547 aa16.82■□□□□ 0.28
VPS25-201ENST00000253794 POLR3DP05423 398 aaPredicted RBP16.82■□□□□ 0.28
VPS25-201ENST00000253794 NF2P35240 595 aa16.82■□□□□ 0.28
VPS25-201ENST00000253794 PRAMEF18Q5VWM3 479 aa16.82■□□□□ 0.28
VPS25-201ENST00000253794 DNAJC18Q9H819 358 aa16.82■□□□□ 0.28
VPS25-201ENST00000253794 CTNNA3Q9UI47 895 aa16.82■□□□□ 0.28
VPS25-201ENST00000253794 ZNF112Q9UJU3 913 aa16.82■□□□□ 0.28
VPS25-201ENST00000253794 LAMA4Q16363 1823 aa16.82■□□□□ 0.28
VPS25-201ENST00000253794 FGRP09769 529 aa16.81■□□□□ 0.28
VPS25-201ENST00000253794 CYP2D6P10635 497 aa16.81■□□□□ 0.28
VPS25-201ENST00000253794 FMR1Q06787 632 aaKnown RBP eCLIP16.81■□□□□ 0.28
VPS25-201ENST00000253794 PPARAQ07869 468 aa16.81■□□□□ 0.28
VPS25-201ENST00000253794 CST9Q5W186 159 aa16.81■□□□□ 0.28
VPS25-201ENST00000253794 C16orf86Q6ZW13 317 aa16.81■□□□□ 0.28
VPS25-201ENST00000253794 ANO2Q9NQ90 1003 aa16.81■□□□□ 0.28
VPS25-201ENST00000253794 SWAP70Q9UH65 585 aa16.81■□□□□ 0.28
VPS25-201ENST00000253794 TRPM7Q96QT4 1865 aa16.81■□□□□ 0.28
VPS25-201ENST00000253794 CYP2D7A0A087X1C5 515 aa16.8■□□□□ 0.28
VPS25-201ENST00000253794 PPP1R12BO60237 982 aaPredicted RBP16.8■□□□□ 0.28
VPS25-201ENST00000253794 PCP11498 1178 aaKnown RBP16.8■□□□□ 0.28
VPS25-201ENST00000253794 NT5C2P49902 561 aa16.8■□□□□ 0.28
VPS25-201ENST00000253794 EVX2Q03828 476 aa16.8■□□□□ 0.28
VPS25-201ENST00000253794 TATDN1Q6P1N9 297 aa16.8■□□□□ 0.28
VPS25-201ENST00000253794 KLRG1Q96E93 195 aa16.8■□□□□ 0.28
VPS25-201ENST00000253794 ZNF341Q9BYN7 854 aa16.8■□□□□ 0.28
VPS25-201ENST00000253794 PHF20L1A8MW92 1017 aa16.79■□□□□ 0.28
VPS25-201ENST00000253794 USP2O75604 605 aaPredicted RBP16.79■□□□□ 0.28
VPS25-201ENST00000253794 CELF2O95319 508 aaKnown RBP16.79■□□□□ 0.28
VPS25-201ENST00000253794 NECTIN1Q15223 517 aa16.79■□□□□ 0.28
VPS25-201ENST00000253794 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.79■□□□□ 0.281e-17■□□□□ 9.7
VPS25-201ENST00000253794 NBPF3Q9H094 633 aa16.79■□□□□ 0.28
VPS25-201ENST00000253794 GBA2Q9HCG7 927 aaPredicted RBP16.79■□□□□ 0.28
VPS25-201ENST00000253794 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.79■□□□□ 0.28
VPS25-201ENST00000253794 RBM8AQ9Y5S9 174 aaKnown RBP16.79■□□□□ 0.28
VPS25-201ENST00000253794 MINDY4BA8MYZ0 360 aa16.78■□□□□ 0.28
VPS25-201ENST00000253794 SMIM22K7EJ46 135 aa16.78■□□□□ 0.28
VPS25-201ENST00000253794 SHMT1P34896 483 aa16.78■□□□□ 0.28
VPS25-201ENST00000253794 IMMTQ16891 758 aaKnown RBP16.78■□□□□ 0.28
VPS25-201ENST00000253794 LDLRAD1Q5T700 205 aa16.78■□□□□ 0.28
VPS25-201ENST00000253794 KCNB2Q92953 911 aa16.78■□□□□ 0.28
VPS25-201ENST00000253794 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.78■□□□□ 0.287e-9■■■■□ 23.2
VPS25-201ENST00000253794 GINM1Q9NU53 330 aa16.78■□□□□ 0.28
VPS25-201ENST00000253794 ZNF213O14771 459 aa16.77■□□□□ 0.28
VPS25-201ENST00000253794 ORC4O43929 436 aa16.77■□□□□ 0.28
VPS25-201ENST00000253794 SLC3A2P08195 630 aaKnown RBP16.77■□□□□ 0.28
VPS25-201ENST00000253794 CYP21A2P08686 494 aa16.77■□□□□ 0.28
VPS25-201ENST00000253794 IREB2P48200 963 aaKnown RBP16.77■□□□□ 0.28
VPS25-201ENST00000253794 CDK8P49336 464 aa16.77■□□□□ 0.28
VPS25-201ENST00000253794 SLC4A8Q2Y0W8 1093 aa16.77■□□□□ 0.28
VPS25-201ENST00000253794 NOL9Q5SY16 702 aaKnown RBP16.77■□□□□ 0.28
VPS25-201ENST00000253794 MIGA2Q7L4E1 593 aa16.77■□□□□ 0.28
VPS25-201ENST00000253794 ARMC9Q7Z3E5 817 aa16.77■□□□□ 0.28
VPS25-201ENST00000253794 CRACR2BQ8N4Y2 399 aaPredicted RBP16.77■□□□□ 0.28
VPS25-201ENST00000253794 C2orf69Q8N8R5 385 aa16.77■□□□□ 0.28
VPS25-201ENST00000253794 STAG1Q8WVM7 1258 aa16.77■□□□□ 0.28
VPS25-201ENST00000253794 DYNLL2Q96FJ2 89 aa16.77■□□□□ 0.28
VPS25-201ENST00000253794 USP26Q9BXU7 913 aa16.77■□□□□ 0.28
VPS25-201ENST00000253794 ZNF287Q9HBT7 754 aa16.77■□□□□ 0.28
VPS25-201ENST00000253794 SLURP2P0DP57 97 aa16.76■□□□□ 0.27
VPS25-201ENST00000253794 APLP1P51693 650 aa16.76■□□□□ 0.27
VPS25-201ENST00000253794 PDE4BQ07343 736 aa16.76■□□□□ 0.27
VPS25-201ENST00000253794 TSGA10IPQ3SY00 556 aa16.76■□□□□ 0.27
VPS25-201ENST00000253794 TBC1D10CQ8IV04 446 aa16.76■□□□□ 0.27
VPS25-201ENST00000253794 TRIM34Q9BYJ4 488 aa16.76■□□□□ 0.27
VPS25-201ENST00000253794 RNF41Q9H4P4 317 aaPredicted RBP16.76■□□□□ 0.27
VPS25-201ENST00000253794 OTOFQ9HC10 1997 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 TMEM88BA6NKF7 163 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 FAM196BA6NMK8 535 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 SLC27A2O14975 620 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 CTNND1O60716 968 aaKnown RBP16.75■□□□□ 0.27
VPS25-201ENST00000253794 HSPA4P34932 840 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 CAP2P40123 477 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 MAP3K9P80192 1104 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 RRP1BQ14684 758 aaKnown RBP16.75■□□□□ 0.27
VPS25-201ENST00000253794 AKNAD1Q5T1N1 836 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 CREB3L3Q68CJ9 461 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.75■□□□□ 0.27
VPS25-201ENST00000253794 ANKRD13AQ8IZ07 590 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 SLC44A5Q8NCS7 719 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 HHIPL1Q96JK4 782 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 CCDC17Q96LX7 622 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 WRNIP1Q96S55 665 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 ANGEL1Q9UNK9 670 aaKnown RBP16.75■□□□□ 0.27
VPS25-201ENST00000253794 TACC3Q9Y6A5 838 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 TLL2Q9Y6L7 1015 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 PLIN4Q96Q06 1357 aa16.75■□□□□ 0.27
VPS25-201ENST00000253794 SEC24BO95487 1268 aa16.74■□□□□ 0.27
VPS25-201ENST00000253794 RASA1P20936 1047 aa16.74■□□□□ 0.27
VPS25-201ENST00000253794 HAND2P61296 217 aa16.74■□□□□ 0.27
VPS25-201ENST00000253794 CTDSPL2Q05D32 466 aa16.74■□□□□ 0.27
VPS25-201ENST00000253794 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
VPS25-201ENST00000253794 SAPCD2Q86UD0 394 aa16.74■□□□□ 0.27
VPS25-201ENST00000253794 IL17RAQ96F46 866 aa16.74■□□□□ 0.27
VPS25-201ENST00000253794 ZNF408Q9H9D4 720 aa16.74■□□□□ 0.27
VPS25-201ENST00000253794 CREBZFQ9NS37 354 aa16.74■□□□□ 0.27
VPS25-201ENST00000253794 FZD1Q9UP38 647 aa16.74■□□□□ 0.27
VPS25-201ENST00000253794 GREB1LQ9C091 1923 aaPredicted RBP16.73■□□□□ 0.27
VPS25-201ENST00000253794 INPP5BP32019 993 aa16.73■□□□□ 0.27
VPS25-201ENST00000253794 CERKLQ49MI3 558 aaPredicted RBP16.73■□□□□ 0.27
VPS25-201ENST00000253794 MOB2Q70IA6 237 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms