RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 GOLGA8HP0CJ92 632 aa17.32■□□□□ 0.36
SAFB2-201ENST00000252542 PDIA4P13667 645 aaKnown RBP17.32■□□□□ 0.36
SAFB2-201ENST00000252542 MECOMQ03112 1051 aa17.32■□□□□ 0.36
SAFB2-201ENST00000252542 NFIXQ14938 502 aa17.32■□□□□ 0.36
SAFB2-201ENST00000252542 TRAPPC3LQ5T215 181 aa17.32■□□□□ 0.36
SAFB2-201ENST00000252542 DHX58Q96C10 678 aa17.32■□□□□ 0.36
SAFB2-201ENST00000252542 TMEM87BQ96K49 555 aa17.32■□□□□ 0.36
SAFB2-201ENST00000252542 ALDH8A1Q9H2A2 487 aaPredicted RBP17.32■□□□□ 0.36
SAFB2-201ENST00000252542 POLR2DO15514 142 aaKnown RBP17.31■□□□□ 0.36
SAFB2-201ENST00000252542 FGFR2P21802 821 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 CCDC144BQ3MJ40 725 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 ADALQ6DHV7 355 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 FANCBQ8NB91 859 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 NOL10Q9BSC4 688 aaKnown RBP17.31■□□□□ 0.36
SAFB2-201ENST00000252542 CDCA7Q9BWT1 371 aaPredicted RBP17.31■□□□□ 0.36
SAFB2-201ENST00000252542 RNF41Q9H4P4 317 aaPredicted RBP17.31■□□□□ 0.36
SAFB2-201ENST00000252542 PHRF1Q9P1Y6 1649 aaKnown RBP17.31■□□□□ 0.36
SAFB2-201ENST00000252542 JMYQ8N9B5 988 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 KCNF1Q9H3M0 494 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 SPATA31A5Q5VU36 1347 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 SPATA31A7Q8IWB4 1347 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 TCRBV5S4A2TA0A5A2 114 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 RASGRP4Q8TDF6 673 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 TGFBRAP1Q8WUH2 860 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 CNNM2Q9H8M5 875 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 PCDHB6Q9Y5E3 794 aa17.31■□□□□ 0.36
SAFB2-201ENST00000252542 NLRP5P59047 1200 aa17.3■□□□□ 0.36
SAFB2-201ENST00000252542 SNW1Q13573 536 aaKnown RBP17.3■□□□□ 0.36
SAFB2-201ENST00000252542 CTCFLQ8NI51 663 aaPredicted RBP17.3■□□□□ 0.36
SAFB2-201ENST00000252542 TPM4P67936 248 aa17.3■□□□□ 0.36
SAFB2-201ENST00000252542 CNBD1Q8NA66 436 aa17.3■□□□□ 0.36
SAFB2-201ENST00000252542 CACTINQ8WUQ7 758 aaKnown RBP17.3■□□□□ 0.36
SAFB2-201ENST00000252542 CPLX3Q8WVH0 158 aa17.3■□□□□ 0.36
SAFB2-201ENST00000252542 EEF2KMTQ96G04 330 aa17.3■□□□□ 0.36
SAFB2-201ENST00000252542 MAPK8IP1Q9UQF2 711 aa17.3■□□□□ 0.36
SAFB2-201ENST00000252542 ATP1A3P13637 1013 aa17.29■□□□□ 0.36
SAFB2-201ENST00000252542 NOM1Q5C9Z4 860 aaKnown RBP17.29■□□□□ 0.36
SAFB2-201ENST00000252542 USP49Q70CQ1 688 aa17.29■□□□□ 0.36
SAFB2-201ENST00000252542 GPKOWQ92917 476 aaPredicted RBP eCLIP17.29■□□□□ 0.361e-6■■□□□ 13.3
SAFB2-201ENST00000252542 RTEL1Q9NZ71 1219 aa17.29■□□□□ 0.36
SAFB2-201ENST00000252542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.29■□□□□ 0.36
SAFB2-201ENST00000252542 OLFM4Q6UX06 510 aa17.29■□□□□ 0.36
SAFB2-201ENST00000252542 KIAA1468Q9P260 1216 aa17.29■□□□□ 0.36
SAFB2-201ENST00000252542 SKILP12757 684 aa17.29■□□□□ 0.36
SAFB2-201ENST00000252542 ZSCAN20P17040 1043 aaPredicted RBP17.29■□□□□ 0.36
SAFB2-201ENST00000252542 BRAPQ7Z569 592 aa17.29■□□□□ 0.36
SAFB2-201ENST00000252542 UFL1O94874 794 aa17.28■□□□□ 0.36
SAFB2-201ENST00000252542 TRIM37O94972 964 aa17.28■□□□□ 0.36
SAFB2-201ENST00000252542 MCM7P33993 719 aa17.28■□□□□ 0.36
SAFB2-201ENST00000252542 NAA30Q147X3 362 aaPredicted RBP17.28■□□□□ 0.36
SAFB2-201ENST00000252542 MSL1Q68DK7 614 aa17.28■□□□□ 0.36
SAFB2-201ENST00000252542 KCNH3Q9ULD8 1083 aa17.28■□□□□ 0.36
SAFB2-201ENST00000252542 LONRF3Q496Y0 759 aa17.28■□□□□ 0.36
SAFB2-201ENST00000252542 CRNKL1Q9BZJ0 848 aaKnown RBP17.28■□□□□ 0.36
SAFB2-201ENST00000252542 VWA3AA6NCI4 1184 aa17.28■□□□□ 0.36
SAFB2-201ENST00000252542 CTAGE5O15320 804 aa17.28■□□□□ 0.36
SAFB2-201ENST00000252542 TNNT1P13805 278 aa17.28■□□□□ 0.36
SAFB2-201ENST00000252542 XBP1P17861 261 aa17.28■□□□□ 0.36
SAFB2-201ENST00000252542 KIAA1524Q8TCG1 905 aa17.28■□□□□ 0.36
SAFB2-201ENST00000252542 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.28■□□□□ 0.36
SAFB2-201ENST00000252542 COL18A1P39060 1754 aa17.27■□□□□ 0.36
SAFB2-201ENST00000252542 ZNF804BA4D1E1 1349 aa17.27■□□□□ 0.36
SAFB2-201ENST00000252542 TNS2Q63HR2 1409 aa17.27■□□□□ 0.36
SAFB2-201ENST00000252542 DMTNQ08495 405 aa17.27■□□□□ 0.36
SAFB2-201ENST00000252542 RASGRP2Q7LDG7 609 aa17.27■□□□□ 0.36
SAFB2-201ENST00000252542 AGXT2Q9BYV1 514 aa17.27■□□□□ 0.36
SAFB2-201ENST00000252542 MROH7-TTC4A0A0A0MT08 1334 aa17.27■□□□□ 0.36
SAFB2-201ENST00000252542 ABCC12Q96J65 1359 aa17.27■□□□□ 0.36
SAFB2-201ENST00000252542 USP17L3A6NCW0 530 aa17.27■□□□□ 0.35
SAFB2-201ENST00000252542 USP17L4A6NCW7 530 aa17.27■□□□□ 0.35
SAFB2-201ENST00000252542 TFAP4Q01664 338 aa17.27■□□□□ 0.35
SAFB2-201ENST00000252542 PIK3AP1Q6ZUJ8 805 aa17.27■□□□□ 0.35
SAFB2-201ENST00000252542 USP17L1Q7RTZ2 530 aa17.27■□□□□ 0.35
SAFB2-201ENST00000252542 FMR1NBQ8N0W7 255 aaPredicted RBP17.27■□□□□ 0.35
SAFB2-201ENST00000252542 XPO4Q9C0E2 1151 aaKnown RBP17.27■□□□□ 0.35
SAFB2-201ENST00000252542 ARFGEF2Q9Y6D5 1785 aa17.27■□□□□ 0.35
SAFB2-201ENST00000252542 RFX7Q2KHR2 1363 aa17.27■□□□□ 0.35
SAFB2-201ENST00000252542 CCDC196A0A1B0GTZ2 297 aa17.26■□□□□ 0.35
SAFB2-201ENST00000252542 LDHBP07195 334 aaKnown RBP17.26■□□□□ 0.35
SAFB2-201ENST00000252542 NOSTRINQ8IVI9 506 aa17.26■□□□□ 0.35
SAFB2-201ENST00000252542 SMYD4Q8IYR2 804 aaPredicted RBP17.26■□□□□ 0.35
SAFB2-201ENST00000252542 ENAHQ8N8S7 591 aaPredicted RBP17.26■□□□□ 0.35
SAFB2-201ENST00000252542 VEGFAP15692 232 aaPredicted RBP17.26■□□□□ 0.35
SAFB2-201ENST00000252542 GNAT2P19087 354 aa17.26■□□□□ 0.35
SAFB2-201ENST00000252542 BSDC1Q9NW68 430 aaPredicted RBP17.26■□□□□ 0.35
SAFB2-201ENST00000252542 SERTAD1Q9UHV2 236 aa17.26■□□□□ 0.35
SAFB2-201ENST00000252542 ZNF444Q8N0Y2 327 aaPredicted RBP17.26■□□□□ 0.35
SAFB2-201ENST00000252542 ZSCAN10Q96SZ4 725 aaPredicted RBP17.26■□□□□ 0.35
SAFB2-201ENST00000252542 FAM217BQ9NTX9 383 aaPredicted RBP17.26■□□□□ 0.35
SAFB2-201ENST00000252542 SHC4Q6S5L8 630 aa17.25■□□□□ 0.35
SAFB2-201ENST00000252542 SLC39A14Q15043 492 aa17.25■□□□□ 0.35
SAFB2-201ENST00000252542 GRIK5Q16478 980 aa17.25■□□□□ 0.35
SAFB2-201ENST00000252542 HEATR3Q7Z4Q2 680 aa17.25■□□□□ 0.35
SAFB2-201ENST00000252542 PCDHA5Q9Y5H7 936 aa17.25■□□□□ 0.35
SAFB2-201ENST00000252542 RBM5P52756 815 aaKnown RBP eCLIP17.25■□□□□ 0.35
SAFB2-201ENST00000252542 UBE4AQ14139 1066 aa17.25■□□□□ 0.35
SAFB2-201ENST00000252542 AMOTL1Q8IY63 956 aa17.25■□□□□ 0.35
SAFB2-201ENST00000252542 WASF1Q92558 559 aa17.25■□□□□ 0.35
SAFB2-201ENST00000252542 EPSTI1Q96J88 318 aa17.25■□□□□ 0.35
SAFB2-201ENST00000252542 KAT14Q9H8E8 782 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms