RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 GPKOWQ92917 476 aaPredicted RBP eCLIP7.09□□□□□ -1.27
AFP-201ENST00000226359 CLP1Q92989 425 aaKnown RBP7.09□□□□□ -1.27
AFP-201ENST00000226359 ARHGAP9Q9BRR9 750 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 SEC31BQ9NQW1 1179 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 ADARB2Q9NS39 739 aaKnown RBP7.09□□□□□ -1.27
AFP-201ENST00000226359 BSDC1Q9NW68 430 aaPredicted RBP7.09□□□□□ -1.27
AFP-201ENST00000226359 ZBED9Q6R2W3 1325 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 KIF16BQ96L93 1317 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 F6X3S4 739 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 GRM8O00222 908 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 ECE2O60344 883 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 RAD17O75943 681 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 ITGA6P23229 1130 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 RPS12P25398 132 aaKnown RBP7.08□□□□□ -1.28
AFP-201ENST00000226359 AGERQ15109 404 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 BEND3Q5T5X7 828 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 SH3RF1Q7Z6J0 888 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 TTLL11Q8NHH1 800 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 TBC1D16Q8TBP0 767 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 API5Q9BZZ5 524 aaKnown RBP7.08□□□□□ -1.28
AFP-201ENST00000226359 GREM2Q9H772 168 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 LEMD3Q9Y2U8 911 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 SBF1O95248 1867 aa7.08□□□□□ -1.28
AFP-201ENST00000226359 GMPSP49915 693 aaPredicted RBP7.07□□□□□ -1.28
AFP-201ENST00000226359 NFX1Q12986 1120 aaKnown RBP7.07□□□□□ -1.28
AFP-201ENST00000226359 NCOA4Q13772 614 aa7.07□□□□□ -1.28
AFP-201ENST00000226359 GPSM3Q9Y4H4 160 aa7.07□□□□□ -1.28
AFP-201ENST00000226359 PCDHB9Q9Y5E1 797 aa7.07□□□□□ -1.28
AFP-201ENST00000226359 DDX60Q8IY21 1712 aaKnown RBP7.07□□□□□ -1.28
AFP-201ENST00000226359 DICER1Q9UPY3 1922 aaKnown RBP7.07□□□□□ -1.28
AFP-201ENST00000226359 IPO8O15397 1037 aaKnown RBP7.07□□□□□ -1.28
AFP-201ENST00000226359 CCT4P50991 539 aaKnown RBP7.07□□□□□ -1.28
AFP-201ENST00000226359 SH3BP2P78314 561 aa7.07□□□□□ -1.28
AFP-201ENST00000226359 CXCL9Q07325 125 aa7.07□□□□□ -1.28
AFP-201ENST00000226359 TRIM32Q13049 653 aa7.07□□□□□ -1.28
AFP-201ENST00000226359 ANKLE1Q8NAG6 615 aa7.07□□□□□ -1.28
AFP-201ENST00000226359 DBNDD1Q9H9R9 158 aa7.07□□□□□ -1.28
AFP-201ENST00000226359 ANO2Q9NQ90 1003 aa7.07□□□□□ -1.28
AFP-201ENST00000226359 CNNM1Q9NRU3 951 aa7.07□□□□□ -1.28
AFP-201ENST00000226359 GPRC5DQ9NZD1 345 aa7.07□□□□□ -1.28
AFP-201ENST00000226359 MED23Q9ULK4 1368 aa7.06□□□□□ -1.28
AFP-201ENST00000226359 ZBTB33Q86T24 672 aa7.06□□□□□ -1.28
AFP-201ENST00000226359 SSH1Q8WYL5 1049 aa7.06□□□□□ -1.28
AFP-201ENST00000226359 POLLQ9UGP5 575 aa7.06□□□□□ -1.28
AFP-201ENST00000226359 MYO3BQ8WXR4 1341 aa7.06□□□□□ -1.28
AFP-201ENST00000226359 LRRC37AA6NMS7 1700 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 PSMD14O00487 310 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 CSF1RP07333 972 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 SCNN1DP51172 638 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 DPYDQ12882 1025 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 LMBR1LQ6UX01 489 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 TRIM67Q6ZTA4 783 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 ZNF804AQ7Z570 1209 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 PODNQ7Z5L7 613 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 ANKMY2Q8IV38 441 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 CNTROBQ8N137 903 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 DPF2Q92785 391 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 KLRG1Q96E93 195 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 COA1Q9GZY4 146 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 CNOT7Q9UIV1 285 aaKnown RBP7.05□□□□□ -1.28
AFP-201ENST00000226359 MINPP1Q9UNW1 487 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 ZNF804BA4D1E1 1349 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 SCN4AP35499 1836 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 UBTFL1P0CB47 393 aaPredicted RBP7.05□□□□□ -1.28
AFP-201ENST00000226359 EPS15P42566 896 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 CASP7P55210 303 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 SKOR1P84550 965 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 ZNF211Q13398 564 aaPredicted RBP7.05□□□□□ -1.28
AFP-201ENST00000226359 BPHLQ86WA6 291 aaPredicted RBP7.05□□□□□ -1.28
AFP-201ENST00000226359 AGBL3Q8NEM8 1001 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 ZNF594Q96JF6 807 aaPredicted RBP7.05□□□□□ -1.28
AFP-201ENST00000226359 DRC1Q96MC2 740 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 GPR101Q96P66 508 aaPredicted RBP7.05□□□□□ -1.28
AFP-201ENST00000226359 HDAC9Q9UKV0 1011 aa7.05□□□□□ -1.28
AFP-201ENST00000226359 ABT1Q9ULW3 272 aaKnown RBP7.05□□□□□ -1.28
AFP-201ENST00000226359 FAM187AA6NFU0 413 aa7.04□□□□□ -1.28
AFP-201ENST00000226359 ZBTB24O43167 697 aaPredicted RBP7.04□□□□□ -1.28
AFP-201ENST00000226359 ABL1P00519 1130 aa7.04□□□□□ -1.28
AFP-201ENST00000226359 MMP14P50281 582 aa7.04□□□□□ -1.28
AFP-201ENST00000226359 CHRNDQ07001 517 aa7.04□□□□□ -1.28
AFP-201ENST00000226359 MAP1SQ66K74 1059 aaPredicted RBP7.04□□□□□ -1.28
AFP-201ENST00000226359 LDHAL6AQ6ZMR3 332 aa7.04□□□□□ -1.28
AFP-201ENST00000226359 SLC51AQ86UW1 340 aa7.04□□□□□ -1.28
AFP-201ENST00000226359 OGFOD1Q8N543 542 aa7.04□□□□□ -1.28
AFP-201ENST00000226359 SREK1Q8WXA9 508 aaKnown RBP7.04□□□□□ -1.28
AFP-201ENST00000226359 EMID1Q96A84 441 aaPredicted RBP7.04□□□□□ -1.28
AFP-201ENST00000226359 DCPSQ96C86 337 aaKnown RBP7.04□□□□□ -1.28
AFP-201ENST00000226359 DUOX1Q9NRD9 1551 aa7.04□□□□□ -1.28
AFP-201ENST00000226359 UTRNP46939 3433 aa7.04□□□□□ -1.28
AFP-201ENST00000226359 CCDC88AQ3V6T2 1871 aa7.04□□□□□ -1.28
AFP-201ENST00000226359 YDJCA8MPS7 323 aa7.03□□□□□ -1.28
AFP-201ENST00000226359 PLIN1O60240 522 aa7.03□□□□□ -1.28
AFP-201ENST00000226359 PRMT3O60678 531 aa7.03□□□□□ -1.28
AFP-201ENST00000226359 KIF4BQ2VIQ3 1234 aa7.03□□□□□ -1.28
AFP-201ENST00000226359 VPS37DQ86XT2 251 aa7.03□□□□□ -1.28
AFP-201ENST00000226359 AIDAQ96BJ3 306 aa7.03□□□□□ -1.28
AFP-201ENST00000226359 SUCLG2Q96I99 432 aa7.03□□□□□ -1.28
AFP-201ENST00000226359 CEP126Q9P2H0 1117 aa7.03□□□□□ -1.28
AFP-201ENST00000226359 SUPT16HQ9Y5B9 1047 aaKnown RBP7.03□□□□□ -1.28
AFP-201ENST00000226359 CACNA1FO60840 1977 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms