RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 GIPC1O14908 333 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 CFBP00751 764 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 VAV2P52735 878 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 TSPYL6Q8N831 410 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 AFG3L2Q9Y4W6 797 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 SYCP2Q9BX26 1530 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 CNGA1P29973 690 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 ATP5DP30049 168 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 KIF22Q14807 665 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 GABPB2Q8TAK5 448 aaPredicted RBP14.77□□□□□ -0.05
COL1A1-201ENST00000225964 TGFBRAP1Q8WUH2 860 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.77□□□□□ -0.05
COL1A1-201ENST00000225964 V9GY48 417 aaPredicted RBP14.77□□□□□ -0.05
COL1A1-201ENST00000225964 PPIP5K2O43314 1243 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 USP21Q9UK80 565 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 H7C1D1 291 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 PDE6BP35913 854 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 TNNI3KQ59H18 835 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 METTL13Q8N6R0 699 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 NKIRAS1Q9NYS0 192 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 FPGT-TNNI3KV9GXZ4 949 aa14.77□□□□□ -0.05
COL1A1-201ENST00000225964 RPRD2Q5VT52 1461 aaKnown RBP14.76□□□□□ -0.05
COL1A1-201ENST00000225964 SYT10Q6XYQ8 523 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 UBL4BQ8N7F7 174 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 PPP1R2P41236 205 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 GADL1Q6ZQY3 521 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 CNGA4Q8IV77 575 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 MAPKAPK5Q8IW41 473 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 SH3TC1Q8TE82 1336 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 RPS6KB1P23443 525 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 DLGAP5Q15398 846 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 CALCRLQ16602 461 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 INTS8Q75QN2 995 aaKnown RBP14.76□□□□□ -0.05
COL1A1-201ENST00000225964 UTP11Q9Y3A2 253 aaKnown RBP14.76□□□□□ -0.05
COL1A1-201ENST00000225964 IVLP07476 585 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 RAD51AP2Q09MP3 1159 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 HACE1Q8IYU2 909 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 METTL22Q9BUU2 404 aaPredicted RBP14.76□□□□□ -0.05
COL1A1-201ENST00000225964 SPC25Q9HBM1 224 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 CSADQ9Y600 493 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 RAD50Q92878 1312 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 PRDM1O75626 825 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 TBC1D8BQ0IIM8 1120 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 CEP128Q6ZU80 1094 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 RNF169Q8NCN4 708 aa14.76□□□□□ -0.05
COL1A1-201ENST00000225964 MRPL44Q9H9J2 332 aaKnown RBP14.76□□□□□ -0.05
COL1A1-201ENST00000225964 CACYBPQ9HB71 228 aaKnown RBP14.76□□□□□ -0.05
COL1A1-201ENST00000225964 DYMQ7RTS9 669 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 TMEM87BQ96K49 555 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 DNM3Q9UQ16 869 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 ABL1P00519 1130 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 ERCC6LQ2NKX8 1250 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 SNX29Q8TEQ0 813 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 BCS1LQ9Y276 419 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 CD2APQ9Y5K6 639 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 CASC4Q6P4E1 433 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 AFAP1L2Q8N4X5 818 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 CCDC110Q8TBZ0 833 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 FAM184BQ9ULE4 1060 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 EYA2O00167 538 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 ALDH1B1P30837 517 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 PRIM1P49642 420 aaKnown RBP14.75□□□□□ -0.05
COL1A1-201ENST00000225964 DCUN1D2Q6PH85 259 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 BAG1Q99933 345 aaPredicted RBP14.75□□□□□ -0.05
COL1A1-201ENST00000225964 GLT8D2Q9H1C3 349 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 FAM170AA1A519 330 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 VIMP08670 466 aaKnown RBP14.75□□□□□ -0.05
COL1A1-201ENST00000225964 ZNF365Q70YC5 407 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 MICALL1Q8N3F8 863 aa14.75□□□□□ -0.05
COL1A1-201ENST00000225964 SOS1Q07889 1333 aaPredicted RBP14.74□□□□□ -0.05
COL1A1-201ENST00000225964 SYNRGQ9UMZ2 1314 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 ARHGEF16Q5VV41 709 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 ZNF790Q6PG37 636 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 CPA1P15085 419 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 SLC5A4Q9NY91 659 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 CHMLP26374 656 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 TTC38Q5R3I4 469 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 UTP14CQ5TAP6 766 aaKnown RBP14.74□□□□□ -0.05
COL1A1-201ENST00000225964 FYB2Q5VWT5 728 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 ERCC3P19447 782 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 AS3MTQ9HBK9 375 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL1A1-201ENST00000225964 ZNF518AQ6AHZ1 1483 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 CD19P15391 556 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 CEP85LQ5SZL2 805 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 GPIHBP1Q8IV16 184 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 RIOK3O14730 519 aaKnown RBP14.74□□□□□ -0.05
COL1A1-201ENST00000225964 SLC27A2O14975 620 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 CETN3O15182 167 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 GPAA1O43292 621 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 TNNQ9UQP3 1299 aa14.74□□□□□ -0.05
COL1A1-201ENST00000225964 POLR2DO15514 142 aaKnown RBP14.73□□□□□ -0.05
COL1A1-201ENST00000225964 DDX21Q9NR30 783 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL1A1-201ENST00000225964 TACC3Q9Y6A5 838 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 ZFYVE9O95405 1425 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 CAPN2P17655 700 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 CSGALNACT2Q8N6G5 542 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 MYO1AQ9UBC5 1043 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 MYL5Q02045 173 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 CERS3Q8IU89 383 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms