RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Hspa4Q61316 841 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Csrnp2Q8BGQ2 534 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Anks1bQ8BIZ1 1259 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Terb1Q8C0V1 768 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Vps53Q8CCB4 832 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Ufl1Q8CCJ3 793 aaKnown RBP14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Nat10Q8K224 1024 aaKnown RBP14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Iqca1Q9CUL5 857 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Fam114a1Q9D281 569 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Snapc4Q8BP86 1333 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Calcoco2A2A6M5 331 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Mcm6P97311 821 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Usp49Q6P9L4 685 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Rnf41Q8BH75 317 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Gtpbp4Q99ME9 634 aaKnown RBP14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Pold4Q9CWP8 107 aa14.74□□□□□ -0.05
Nup88-203ENSMUST00000108531 Kcnh4A2A5F7 1018 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Zscan20B2KFW1 1030 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 PparaP23204 468 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Irx2P81066 474 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Q3TYL0 343 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Ncoa7Q6DFV7 943 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Ube3cQ80U95 1083 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Olfm5Q8BU90 496 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Vps16Q920Q4 839 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Cep89Q9CZX2 791 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 AW822073A0A0N4SUK1 652 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Ankrd40Q5SUE8 363 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Ift88Q61371 824 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Rassf4Q8CB96 322 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Desi2Q9D291 194 aa14.73□□□□□ -0.05
Nup88-203ENSMUST00000108531 Dennd3A2RT67 1274 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Pde11aP0C1Q2 933 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Kiaa1468Q148V7 1216 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Fam89aQ14BJ1 175 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Jmjd4Q8BFT6 427 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Wdr3Q8BHB4 942 aaKnown RBP14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Klhl40Q9D783 621 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Rapgef4Q9EQZ6 1011 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Tfcp2Q9ERA0 502 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 AfdnQ9QZQ1 1820 aaKnown RBP14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Myh3P13541 1940 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Tnni2P13412 182 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Anp32eP97822 260 aaKnown RBP14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Clic6Q8BHB9 596 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Iqcb1Q8BP00 598 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Lrrd1Q8C0R9 853 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Phf20l1Q8CCJ9 1013 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Rbm33Q9CXK9 1231 aaKnown RBP14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Pik3ap1Q9EQ32 811 aa14.72□□□□□ -0.05
Nup88-203ENSMUST00000108531 Eif5P59325 429 aaKnown RBP14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Gtf2f1Q3THK3 508 aaKnown RBP14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Lamb3Q61087 1168 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Nab2Q61127 525 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Ovgp1Q62010 721 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Cyp4x1Q6A152 507 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Cep128Q8BI22 1102 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Ttc12Q8BW49 704 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 AatfQ9JKX4 526 aaKnown RBP14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Prr5lA2AVJ5 370 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Zbtb7aO88939 569 aaKnown RBP14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Pola2P33611 600 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 BaatQ91X34 420 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Pcdhgc5Q91XW9 944 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 BccipQ9CWI3 316 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Lmbr1Q9JIT0 490 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 GdaQ9R111 454 aa14.71□□□□□ -0.05
Nup88-203ENSMUST00000108531 Rsrc2A2RTL5 376 aaKnown RBP14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 Phldb3E9QAF4 648 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 Sec23aQ01405 765 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 Brinp3Q499E0 766 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 Sval3Q76I99 144 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 LarsQ8BMJ2 1178 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 Efcc1Q9JJF6 558 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 Vstm4T1NXB5 319 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 Akap11E9Q777 1895 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 Scn4aQ9ER60 1841 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 Pcdh10E9PXQ7 1057 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 Cyp3a25O09158 503 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 PcQ05920 1178 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 Map9Q3TRR0 646 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 MicalclQ9D5U9 680 aa14.7□□□□□ -0.06
Nup88-203ENSMUST00000108531 CluhQ5SW19 1315 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Cul4bA2A432 970 aaKnown RBP14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Sox5P35710 763 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Ppp2r5bQ6PD28 497 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Tmco3Q8BH01 678 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Susd4Q8BH32 490 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Stac3Q8BZ71 360 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Ccdc12Q8R344 166 aaKnown RBP14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Kndc1Q0KK55 1742 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Il7P10168 154 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 GabrdP22933 449 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 C87499Q3UX49 493 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 VeztQ3ZK22 780 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Cyp24a1Q64441 514 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Tas2r124Q7M718 309 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Necab1Q8BG18 352 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Brms1Q99N20 246 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Trim34aQ99PP6 485 aa14.69□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms