RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 MACF1Q9UPN3 7388 aaKnown RBP1.65□□□□□ -2.14
CKS1BP3-201ENST00000600888 A8MWP4 228 aa1.65□□□□□ -2.15
CKS1BP3-201ENST00000600888 TSTD3H0UI37 97 aa1.65□□□□□ -2.15
CKS1BP3-201ENST00000600888 SPANXA2-OT1Q8N9U9 137 aa1.65□□□□□ -2.15
CKS1BP3-201ENST00000600888 ZCCHC13Q8WW36 166 aaKnown RBP1.65□□□□□ -2.15
CKS1BP3-201ENST00000600888 RBM12B-AS1Q9P1G2 102 aa1.65□□□□□ -2.15
CKS1BP3-201ENST00000600888 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
CKS1BP3-201ENST00000600888 IGKV3D-7A0A0C4DH55 119 aa1.64□□□□□ -2.15
CKS1BP3-201ENST00000600888 H3BT86 120 aa1.64□□□□□ -2.15
CKS1BP3-201ENST00000600888 PRO0628Q9UI54 55 aa1.64□□□□□ -2.15
CKS1BP3-201ENST00000600888 USH2AO75445 5202 aa1.64□□□□□ -2.15
CKS1BP3-201ENST00000600888 FAM236DA0A1B0GTK5 79 aa1.63□□□□□ -2.15
CKS1BP3-201ENST00000600888 NDUFS5O43920 106 aa1.63□□□□□ -2.15
CKS1BP3-201ENST00000600888 FAM236CP0DP71 79 aa1.63□□□□□ -2.15
CKS1BP3-201ENST00000600888 SPINK7P58062 85 aa1.63□□□□□ -2.15
CKS1BP3-201ENST00000600888 NREPQ16612 68 aa1.63□□□□□ -2.15
CKS1BP3-201ENST00000600888 C4orf26Q17RF5 130 aa1.63□□□□□ -2.15
CKS1BP3-201ENST00000600888 SPINT4Q6UDR6 99 aa1.63□□□□□ -2.15
CKS1BP3-201ENST00000600888 PRR15Q8IV56 129 aa1.63□□□□□ -2.15
CKS1BP3-201ENST00000600888 NAA38Q9BRA0 125 aaKnown RBP1.63□□□□□ -2.15
CKS1BP3-201ENST00000600888 C14orf132Q9NPU4 83 aa1.63□□□□□ -2.15
CKS1BP3-201ENST00000600888 MMP24-AS1A0A0U1RRL7 71 aa1.62□□□□□ -2.15
CKS1BP3-201ENST00000600888 LOC105371267A0A1B0GV96 52 aa1.62□□□□□ -2.15
CKS1BP3-201ENST00000600888 A0A1W2PPM0 123 aa1.62□□□□□ -2.15
CKS1BP3-201ENST00000600888 TAX1BP3O14907 124 aa1.62□□□□□ -2.15
CKS1BP3-201ENST00000600888 MT2AP02795 61 aa1.62□□□□□ -2.15
CKS1BP3-201ENST00000600888 TMEM254Q8TBM7 123 aa1.62□□□□□ -2.15
CKS1BP3-201ENST00000600888 MRPL34Q9BQ48 92 aaKnown RBP1.62□□□□□ -2.15
CKS1BP3-201ENST00000600888 SMIM26A0A096LP01 95 aa1.61□□□□□ -2.15
CKS1BP3-201ENST00000600888 hDV103S1A0JD37 113 aa1.61□□□□□ -2.15
CKS1BP3-201ENST00000600888 MT1FP04733 61 aa1.61□□□□□ -2.15
CKS1BP3-201ENST00000600888 P0C880 135 aa1.61□□□□□ -2.15
CKS1BP3-201ENST00000600888 WFDC13Q8IUB5 93 aa1.61□□□□□ -2.15
CKS1BP3-201ENST00000600888 K7EQZ3 153 aa1.6□□□□□ -2.15
CKS1BP3-201ENST00000600888 BATFQ16520 125 aa1.6□□□□□ -2.15
CKS1BP3-201ENST00000600888 C1orf64Q8NEQ6 169 aa1.6□□□□□ -2.15
CKS1BP3-201ENST00000600888 FCGBPQ9Y6R7 5405 aaPredicted RBP1.6□□□□□ -2.15
CKS1BP3-201ENST00000600888 H1FX-AS1Q4G0G2 97 aa1.59□□□□□ -2.15
CKS1BP3-201ENST00000600888 SPCS1Q9Y6A9 102 aa1.59□□□□□ -2.15
CKS1BP3-201ENST00000600888 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
CKS1BP3-201ENST00000600888 COL5A1-AS1Q5SY13 56 aa1.58□□□□□ -2.16
CKS1BP3-201ENST00000600888 C7orf65Q6ZTY9 151 aa1.58□□□□□ -2.16
CKS1BP3-201ENST00000600888 KRTAP12-4P60329 112 aa1.57□□□□□ -2.16
CKS1BP3-201ENST00000600888 CASC2Q6XLA1 102 aa1.57□□□□□ -2.16
CKS1BP3-201ENST00000600888 UBL5Q9BZL1 73 aa1.57□□□□□ -2.16
CKS1BP3-201ENST00000600888 LINC00846Q9NV44 126 aa1.57□□□□□ -2.16
CKS1BP3-201ENST00000600888 HCG22E2RYF7 251 aa1.56□□□□□ -2.16
CKS1BP3-201ENST00000600888 K7EP34 96 aa1.56□□□□□ -2.16
CKS1BP3-201ENST00000600888 KRTAP20-1Q3LI63 56 aa1.56□□□□□ -2.16
CKS1BP3-201ENST00000600888 KRTAP19-6Q3LI70 58 aa1.56□□□□□ -2.16
CKS1BP3-201ENST00000600888 F8W1H4 67 aa1.55□□□□□ -2.16
CKS1BP3-201ENST00000600888 KRTAP5-8O75690 187 aa1.55□□□□□ -2.16
CKS1BP3-201ENST00000600888 KRTAP6-3Q3LI67 103 aa1.55□□□□□ -2.16
CKS1BP3-201ENST00000600888 GTF2H5Q6ZYL4 71 aa1.55□□□□□ -2.16
CKS1BP3-201ENST00000600888 TP53AIP1Q9HCN2 124 aa1.55□□□□□ -2.16
CKS1BP3-201ENST00000600888 KMT2DO14686 5537 aa1.54□□□□□ -2.16
CKS1BP3-201ENST00000600888 LUZP6Q538Z0 58 aa1.54□□□□□ -2.16
CKS1BP3-201ENST00000600888 ACYP1P07311 99 aa1.53□□□□□ -2.16
CKS1BP3-201ENST00000600888 ETDBQ3ZM63 59 aa1.53□□□□□ -2.16
CKS1BP3-201ENST00000600888 ADM2Q7Z4H4 148 aa1.53□□□□□ -2.16
CKS1BP3-201ENST00000600888 MUC12Q9UKN1 5478 aa1.53□□□□□ -2.16
CKS1BP3-201ENST00000600888 MP68P56378 58 aa1.52□□□□□ -2.17
CKS1BP3-201ENST00000600888 CSAG1Q6PB30 78 aa1.51□□□□□ -2.17
CKS1BP3-201ENST00000600888 SPRR2GQ9BYE4 73 aa1.51□□□□□ -2.17
CKS1BP3-201ENST00000600888 CYP4F30PQ9H0H9 118 aa1.51□□□□□ -2.17
CKS1BP3-201ENST00000600888 S4R3F8 94 aa1.51□□□□□ -2.17
CKS1BP3-201ENST00000600888 TRAV22A0A0B4J277 110 aa1.5□□□□□ -2.17
CKS1BP3-201ENST00000600888 LOC101927531A0A1B0GV80 90 aa1.5□□□□□ -2.17
CKS1BP3-201ENST00000600888 KRTAP19-8Q3LI54 63 aa1.5□□□□□ -2.17
CKS1BP3-201ENST00000600888 ATP5EP2Q5VTU8 51 aa1.5□□□□□ -2.17
CKS1BP3-201ENST00000600888 LCA10Q71F78 164 aa1.5□□□□□ -2.17
CKS1BP3-201ENST00000600888 UQCRQO14949 82 aa1.49□□□□□ -2.17
CKS1BP3-201ENST00000600888 MT1BP07438 61 aa1.49□□□□□ -2.17
CKS1BP3-201ENST00000600888 KLKP1Q107X0 134 aa1.49□□□□□ -2.17
CKS1BP3-201ENST00000600888 FAM236AA0A1B0GUQ0 79 aa1.48□□□□□ -2.17
CKS1BP3-201ENST00000600888 FAM236BA0A1B0GV22 79 aa1.48□□□□□ -2.17
CKS1BP3-201ENST00000600888 H0YAA0 97 aa1.48□□□□□ -2.17
CKS1BP3-201ENST00000600888 ATOX1O00244 68 aa1.48□□□□□ -2.17
CKS1BP3-201ENST00000600888 PMAIP1Q13794 54 aa1.48□□□□□ -2.17
CKS1BP3-201ENST00000600888 LINC00643Q86TS7 51 aa1.48□□□□□ -2.17
CKS1BP3-201ENST00000600888 CRIPTQ9P021 101 aa1.48□□□□□ -2.17
CKS1BP3-201ENST00000600888 MDN1Q9NU22 5596 aa1.48□□□□□ -2.17
CKS1BP3-201ENST00000600888 A8MUN3 132 aa1.47□□□□□ -2.17
CKS1BP3-201ENST00000600888 Q5VV11 94 aa1.47□□□□□ -2.17
CKS1BP3-201ENST00000600888 ANAPC13Q9BS18 74 aa1.47□□□□□ -2.17
CKS1BP3-201ENST00000600888 IMUPQ9GZP8 106 aa1.47□□□□□ -2.17
CKS1BP3-201ENST00000600888 A0A087WVE0 104 aa1.46□□□□□ -2.18
CKS1BP3-201ENST00000600888 A6NN06 94 aa1.46□□□□□ -2.18
CKS1BP3-201ENST00000600888 H0Y9P7 68 aa1.46□□□□□ -2.18
CKS1BP3-201ENST00000600888 HIST1H4AP62805 103 aaKnown RBP1.46□□□□□ -2.18
CKS1BP3-201ENST00000600888 NDUFC1O43677 76 aa1.45□□□□□ -2.18
CKS1BP3-201ENST00000600888 R4GN34 69 aa1.45□□□□□ -2.18
CKS1BP3-201ENST00000600888 H3BPC8 53 aa1.44□□□□□ -2.18
CKS1BP3-201ENST00000600888 LINC00208Q96KT6 92 aa1.44□□□□□ -2.18
CKS1BP3-201ENST00000600888 A0A1B0GV90 55 aa1.43□□□□□ -2.18
CKS1BP3-201ENST00000600888 J3QR89 54 aa1.43□□□□□ -2.18
CKS1BP3-201ENST00000600888 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
CKS1BP3-201ENST00000600888 AHNAK2Q8IVF2 5795 aa1.42□□□□□ -2.18
CKS1BP3-201ENST00000600888 K7ERS5 55 aa1.42□□□□□ -2.18
CKS1BP3-201ENST00000600888 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms