RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 SRP19P09132 144 aaKnown RBP1.34□□□□□ -2.19
UBR4-215ENST00000492606 ATP6V0CP27449 155 aa1.34□□□□□ -2.19
UBR4-215ENST00000492606 TAS2R45P59539 299 aa1.34□□□□□ -2.19
UBR4-215ENST00000492606 FABP9Q0Z7S8 132 aa1.34□□□□□ -2.19
UBR4-215ENST00000492606 FAM74A1Q5RGS3 127 aa1.34□□□□□ -2.19
UBR4-215ENST00000492606 TMEM14EPQ6UXP3 125 aa1.34□□□□□ -2.19
UBR4-215ENST00000492606 FAM213BQ8TBF2 198 aa1.34□□□□□ -2.19
UBR4-215ENST00000492606 MAP1LC3BQ9GZQ8 125 aa1.34□□□□□ -2.19
UBR4-215ENST00000492606 WDR61Q9GZS3 305 aaKnown RBP1.34□□□□□ -2.19
UBR4-215ENST00000492606 NIT2Q9NQR4 276 aa1.34□□□□□ -2.19
UBR4-215ENST00000492606 TMEM167BQ9NRX6 74 aa1.34□□□□□ -2.19
UBR4-215ENST00000492606 PSENENQ9NZ42 101 aa1.34□□□□□ -2.19
UBR4-215ENST00000492606 TRBV30A0A0K0K1B3 111 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 FAM236AA0A1B0GUQ0 79 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 FAM236BA0A1B0GV22 79 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 A0A1W2PRE2 83 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 H7C2G1 150 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 SSSCA1O60232 199 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 DDTP30046 118 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 RPL35P42766 123 aaKnown RBP1.33□□□□□ -2.2
UBR4-215ENST00000492606 PMCHL1Q16048 86 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 C9orf153Q5TBE3 101 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 MIC13Q5XKP0 118 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 SMCR5Q8TEV8 140 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 FAM167A-AS1Q96KT0 104 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 SMIM7Q9BQ49 75 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 TMEM14CQ9P0S9 112 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 GNG13Q9P2W3 67 aa1.33□□□□□ -2.2
UBR4-215ENST00000492606 GRIFINA4D1Z8 144 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 LINC01549A6NIU2 74 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 M0R143 59 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 LST1O00453 97 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 HIST1H2BKO60814 126 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 HIST1H2BJP06899 126 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 ADCYAP1P18509 176 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 HIST1H2BOP23527 126 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 HIST1H2BBP33778 126 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 NDUFA6P56556 154 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 HIST1H2BDP58876 126 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 KRTAP12-3P60328 96 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 HIST1H2BCP62807 126 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 GNG5P63218 68 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 HIST2H2BEQ16778 126 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 SPANXN5Q5MJ07 72 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.32□□□□□ -2.2
UBR4-215ENST00000492606 GOLT1AQ6ZVE7 132 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 HIST3H2BBQ8N257 126 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 HIST1H2BHQ93079 126 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 HIST1H2BNQ99877 126 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 HIST1H2BMQ99879 126 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 C2orf88Q9BSF0 95 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 NPCDR1Q9BY65 106 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 TTTY13Q9BZ97 58 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 SMIM3Q9BZL3 60 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 OSTCQ9NRP0 149 aa1.32□□□□□ -2.2
UBR4-215ENST00000492606 TGIF2-C20orf24A0A0A6YYL0 155 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 C11orf86A6NJI1 115 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 A8MUN3 132 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 H3BPC8 53 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 M0QY20 66 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 TRGC2P03986 189 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 TRGC1P0CF51 173 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 G0S2P27469 103 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 GNG4P50150 75 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 CEBPGP53567 150 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 CCL20P78556 96 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 ADIRFQ15847 76 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 MIR17HGQ75NE6 70 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 BORCS7Q96B45 105 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 HIST1H2BLQ99880 126 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 PMCHL2Q9BQD1 86 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 ZFP30Q9Y2G7 519 aa1.31□□□□□ -2.2
UBR4-215ENST00000492606 UBE2L5PA0A1B0GUS4 154 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 SMIM27A0A1W2PRY6 76 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 K7EMI3 77 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 CXCL1P09341 107 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 NBEAP1P0C6P0 100 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 FABP4P15090 132 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 GCHFRP30047 84 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 PYY3Q5JQD4 70 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 COL5A1-AS1Q5SY13 56 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 BAGE3Q86Y29 109 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 BAGE2Q86Y30 109 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 OR10AG1Q8NH19 301 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 CHCHD1Q96BP2 118 aaKnown RBP1.3□□□□□ -2.2
UBR4-215ENST00000492606 Q96NJ1 140 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 Q9BRP9 147 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 MIEN1Q9BRT3 115 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 VAMP8Q9BV40 100 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 CDC42SE2Q9NRR3 84 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 UQCR10Q9UDW1 63 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 NAT8BQ9UHF3 227 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 HSPB8Q9UJY1 196 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 LAMTOR2Q9Y2Q5 125 aa1.3□□□□□ -2.2
UBR4-215ENST00000492606 LINC00587B1AMM8 73 aa1.29□□□□□ -2.2
UBR4-215ENST00000492606 F2Z2F3 143 aa1.29□□□□□ -2.2
UBR4-215ENST00000492606 PPP1R17O96001 155 aa1.29□□□□□ -2.2
UBR4-215ENST00000492606 PPBPP02775 128 aa1.29□□□□□ -2.2
UBR4-215ENST00000492606 UBE2G1P62253 170 aa1.29□□□□□ -2.2
UBR4-215ENST00000492606 MRPL54Q6P161 138 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms