RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 LINC01549A6NIU2 74 aa2.71□□□□□ -1.98
CDKL5-204ENST00000623364 HIGD1CA8MV81 97 aa2.71□□□□□ -1.98
CDKL5-204ENST00000623364 K7EN84 100 aa2.71□□□□□ -1.98
CDKL5-204ENST00000623364 PPBPP02775 128 aa2.71□□□□□ -1.98
CDKL5-204ENST00000623364 RAB4AP20338 218 aa2.71□□□□□ -1.98
CDKL5-204ENST00000623364 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
CDKL5-204ENST00000623364 YPEL4Q96NS1 127 aa2.71□□□□□ -1.98
CDKL5-204ENST00000623364 TIMM21Q9BVV7 248 aa2.71□□□□□ -1.98
CDKL5-204ENST00000623364 SPRR2GQ9BYE4 73 aa2.71□□□□□ -1.98
CDKL5-204ENST00000623364 PRO2289Q9P1D8 64 aa2.71□□□□□ -1.98
CDKL5-204ENST00000623364 LAMTOR2Q9Y2Q5 125 aa2.71□□□□□ -1.98
CDKL5-204ENST00000623364 IFITM10A6NMD0 228 aa2.7□□□□□ -1.98
CDKL5-204ENST00000623364 TCAPO15273 167 aa2.7□□□□□ -1.98
CDKL5-204ENST00000623364 VPREB1P12018 145 aa2.7□□□□□ -1.98
CDKL5-204ENST00000623364 KRTAP12-2P59991 146 aa2.7□□□□□ -1.98
CDKL5-204ENST00000623364 HBBP68871 147 aa2.7□□□□□ -1.98
CDKL5-204ENST00000623364 RPL24P83731 157 aaKnown RBP2.7□□□□□ -1.98
CDKL5-204ENST00000623364 FABP9Q0Z7S8 132 aa2.7□□□□□ -1.98
CDKL5-204ENST00000623364 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
CDKL5-204ENST00000623364 Q8IZM0 81 aa2.7□□□□□ -1.98
CDKL5-204ENST00000623364 LINC01561Q8N1V8 128 aa2.7□□□□□ -1.98
CDKL5-204ENST00000623364 Q96NJ1 140 aa2.7□□□□□ -1.98
CDKL5-204ENST00000623364 ETDCA0A1B0GVM5 59 aa2.69□□□□□ -1.98
CDKL5-204ENST00000623364 K7EMI3 77 aa2.69□□□□□ -1.98
CDKL5-204ENST00000623364 TRGC2P03986 189 aa2.69□□□□□ -1.98
CDKL5-204ENST00000623364 S100A2P29034 98 aa2.69□□□□□ -1.98
CDKL5-204ENST00000623364 COA6Q5JTJ3 125 aaKnown RBP2.69□□□□□ -1.98
CDKL5-204ENST00000623364 CNFNQ9BYD5 112 aa2.69□□□□□ -1.98
CDKL5-204ENST00000623364 C5orf52A6NGY3 159 aa2.68□□□□□ -1.98
CDKL5-204ENST00000623364 ERC2-IT1O76042 136 aa2.68□□□□□ -1.98
CDKL5-204ENST00000623364 FCER1GP30273 86 aa2.68□□□□□ -1.98
CDKL5-204ENST00000623364 Q6ZN92 141 aa2.68□□□□□ -1.98
CDKL5-204ENST00000623364 TMEM136Q6ZRR5 245 aa2.68□□□□□ -1.98
CDKL5-204ENST00000623364 NOTCH2NLQ7Z3S9 236 aa2.68□□□□□ -1.98
CDKL5-204ENST00000623364 BAGE3Q86Y29 109 aa2.68□□□□□ -1.98
CDKL5-204ENST00000623364 TMEM18Q96B42 140 aa2.68□□□□□ -1.98
CDKL5-204ENST00000623364 CHCHD1Q96BP2 118 aaKnown RBP2.68□□□□□ -1.98
CDKL5-204ENST00000623364 TMEM191AQ9H0A3 160 aa2.68□□□□□ -1.98
CDKL5-204ENST00000623364 ST20Q9HBF5 79 aa2.68□□□□□ -1.98
CDKL5-204ENST00000623364 TRBV6-5A0A0K0K1A5 114 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 A0A1B0GXF2 115 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 HIST1H2BKO60814 126 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 HIST1H2BJP06899 126 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 IGLC6P0CF74 106 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 HIST1H2BOP23527 126 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 HIST1H2BBP33778 126 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 NDUFA6P56556 154 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 HIST1H2BDP58876 126 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 HIST1H2BCP62807 126 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 HIST2H2BEQ16778 126 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.67□□□□□ -1.98
CDKL5-204ENST00000623364 FAM104BQ5XKR9 115 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 MRPL54Q6P161 138 aaKnown RBP2.67□□□□□ -1.98
CDKL5-204ENST00000623364 IGFL1Q6UW32 110 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 ORMDL3Q8N138 153 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 HIST1H2BHQ93079 126 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 FAM218AQ96MZ4 157 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 HIST1H2BNQ99877 126 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 HIST1H2BMQ99879 126 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 C20orf78Q9BR46 151 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 NXT2Q9NPJ8 142 aaKnown RBP2.67□□□□□ -1.98
CDKL5-204ENST00000623364 PYGO1Q9Y3Y4 419 aa2.67□□□□□ -1.98
CDKL5-204ENST00000623364 FAM236AA0A1B0GUQ0 79 aa2.66□□□□□ -1.98
CDKL5-204ENST00000623364 FAM236BA0A1B0GV22 79 aa2.66□□□□□ -1.98
CDKL5-204ENST00000623364 A8MUU9 505 aa2.66□□□□□ -1.98
CDKL5-204ENST00000623364 LINC00614P0C842 121 aa2.66□□□□□ -1.98
CDKL5-204ENST00000623364 CKS2P33552 79 aa2.66□□□□□ -1.98
CDKL5-204ENST00000623364 CXCL5P42830 114 aa2.66□□□□□ -1.98
CDKL5-204ENST00000623364 SNRPEP62304 92 aaKnown RBP2.66□□□□□ -1.98
CDKL5-204ENST00000623364 URB1-AS1Q96HZ7 61 aa2.66□□□□□ -1.98
CDKL5-204ENST00000623364 HSPB8Q9UJY1 196 aa2.66□□□□□ -1.98
CDKL5-204ENST00000623364 IGKV2D-30A0A075B6S6 120 aa2.65□□□□□ -1.99
CDKL5-204ENST00000623364 TRBV27A0A0K0K1C4 114 aa2.65□□□□□ -1.99
CDKL5-204ENST00000623364 A0A1W2PNM2 257 aa2.65□□□□□ -1.99
CDKL5-204ENST00000623364 VCYO14598 125 aa2.65□□□□□ -1.99
CDKL5-204ENST00000623364 HSBP1O75506 76 aa2.65□□□□□ -1.99
CDKL5-204ENST00000623364 FA2HQ7L5A8 372 aa2.65□□□□□ -1.99
CDKL5-204ENST00000623364 AMN1Q8IY45 258 aa2.65□□□□□ -1.99
CDKL5-204ENST00000623364 ZNF625Q96I27 306 aaPredicted RBP2.65□□□□□ -1.99
CDKL5-204ENST00000623364 PRELID3AQ96N28 172 aa2.65□□□□□ -1.99
CDKL5-204ENST00000623364 MAP1LC3AQ9H492 121 aa2.65□□□□□ -1.99
CDKL5-204ENST00000623364 LOC105371267A0A1B0GV96 52 aa2.64□□□□□ -1.99
CDKL5-204ENST00000623364 KRTAP16-1A8MUX0 517 aa2.64□□□□□ -1.99
CDKL5-204ENST00000623364 SCGB1D1O95968 90 aa2.64□□□□□ -1.99
CDKL5-204ENST00000623364 TCL1BO95988 128 aa2.64□□□□□ -1.99
CDKL5-204ENST00000623364 SMIM6P0DI80 62 aa2.64□□□□□ -1.99
CDKL5-204ENST00000623364 S100A12P80511 92 aa2.64□□□□□ -1.99
CDKL5-204ENST00000623364 PMCHL1Q16048 86 aa2.64□□□□□ -1.99
CDKL5-204ENST00000623364 ORMDL2Q53FV1 153 aa2.64□□□□□ -1.99
CDKL5-204ENST00000623364 PAPPA-AS1Q5QFB9 102 aa2.64□□□□□ -1.99
CDKL5-204ENST00000623364 LINC01546A6NGU7 62 aa2.63□□□□□ -1.99
CDKL5-204ENST00000623364 D6R8Y8 96 aa2.63□□□□□ -1.99
CDKL5-204ENST00000623364 ATP5LO75964 103 aa2.63□□□□□ -1.99
CDKL5-204ENST00000623364 FABP4P15090 132 aa2.63□□□□□ -1.99
CDKL5-204ENST00000623364 SPRR1AP35321 89 aa2.63□□□□□ -1.99
CDKL5-204ENST00000623364 POLR2KP53803 58 aaKnown RBP2.63□□□□□ -1.99
CDKL5-204ENST00000623364 MRPS36P82909 103 aaKnown RBP2.63□□□□□ -1.99
CDKL5-204ENST00000623364 MRPL51Q4U2R6 128 aaKnown RBP2.63□□□□□ -1.99
CDKL5-204ENST00000623364 SLC25A34Q6PIV7 304 aa2.63□□□□□ -1.99
CDKL5-204ENST00000623364 HIST3H2BBQ8N257 126 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms