RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 RPL28P46779 137 aaKnown RBP6.58□□□□□ -1.36
SS18-210ENST00000578700 RPL18AQ02543 176 aaKnown RBP6.58□□□□□ -1.36
SS18-210ENST00000578700 GAGE2EQ4V326 116 aa6.58□□□□□ -1.36
SS18-210ENST00000578700 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
SS18-210ENST00000578700 XAGE1AQ9HD64 81 aa6.58□□□□□ -1.36
SS18-210ENST00000578700 GAGE2DQ9UEU5 116 aa6.58□□□□□ -1.36
SS18-210ENST00000578700 PKHD1L1Q86WI1 4243 aa6.58□□□□□ -1.36
SS18-210ENST00000578700 LOC107984640A0A0U1RRK4 108 aa6.57□□□□□ -1.36
SS18-210ENST00000578700 NCR3O14931 201 aa6.57□□□□□ -1.36
SS18-210ENST00000578700 TLX1NBP0CAT3 122 aa6.57□□□□□ -1.36
SS18-210ENST00000578700 LRCOL1A6NCL2 159 aa6.56□□□□□ -1.36
SS18-210ENST00000578700 Q8N814 137 aa6.56□□□□□ -1.36
SS18-210ENST00000578700 NKAPP1Q8N9T2 125 aa6.56□□□□□ -1.36
SS18-210ENST00000578700 M0R378 163 aa6.55□□□□□ -1.36
SS18-210ENST00000578700 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
SS18-210ENST00000578700 PRR3P79522 188 aaKnown RBP6.55□□□□□ -1.36
SS18-210ENST00000578700 Q6ZRP5 223 aa6.55□□□□□ -1.36
SS18-210ENST00000578700 SMIM11BQ8TCY0 68 aa6.55□□□□□ -1.36
SS18-210ENST00000578700 LST1O00453 97 aa6.54□□□□□ -1.36
SS18-210ENST00000578700 PLA2G2DQ9UNK4 145 aa6.54□□□□□ -1.36
SS18-210ENST00000578700 C9JAW5 83 aa6.53□□□□□ -1.36
SS18-210ENST00000578700 DNAL4O96015 105 aa6.53□□□□□ -1.36
SS18-210ENST00000578700 GAGE2BQ13066 116 aa6.53□□□□□ -1.36
SS18-210ENST00000578700 LINC01620Q4KN68 170 aa6.53□□□□□ -1.36
SS18-210ENST00000578700 CLEC2BQ92478 149 aa6.53□□□□□ -1.36
SS18-210ENST00000578700 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.52□□□□□ -1.37
SS18-210ENST00000578700 IGLV6-57P01721 117 aa6.52□□□□□ -1.37
SS18-210ENST00000578700 TRACP01848 142 aa6.52□□□□□ -1.37
SS18-210ENST00000578700 SLPIP03973 132 aa6.52□□□□□ -1.37
SS18-210ENST00000578700 VPREB1P12018 145 aa6.52□□□□□ -1.37
SS18-210ENST00000578700 TRAV23DV6A0A075B6W5 121 aa6.51□□□□□ -1.37
SS18-210ENST00000578700 SLC25A20O43772 301 aa6.51□□□□□ -1.37
SS18-210ENST00000578700 WFDC2Q14508 124 aa6.51□□□□□ -1.37
SS18-210ENST00000578700 TRBV10-3A0A0K0K1G6 114 aa6.5□□□□□ -1.37
SS18-210ENST00000578700 C9orf129Q5T035 196 aaKnown RBP6.5□□□□□ -1.37
SS18-210ENST00000578700 A0A1B0GX51 115 aa6.49□□□□□ -1.37
SS18-210ENST00000578700 H3BT86 120 aa6.49□□□□□ -1.37
SS18-210ENST00000578700 J3QR89 54 aa6.49□□□□□ -1.37
SS18-210ENST00000578700 K7ERU9 68 aa6.49□□□□□ -1.37
SS18-210ENST00000578700 M0QXV9 152 aa6.49□□□□□ -1.37
SS18-210ENST00000578700 C6orf99Q4VX62 202 aa6.49□□□□□ -1.37
SS18-210ENST00000578700 ANKRD29Q8N6D5 301 aa6.49□□□□□ -1.37
SS18-210ENST00000578700 Q8NDZ9 215 aa6.49□□□□□ -1.37
SS18-210ENST00000578700 DIRC1Q969H9 104 aa6.49□□□□□ -1.37
SS18-210ENST00000578700 LINC00474Q9P2X8 69 aa6.49□□□□□ -1.37
SS18-210ENST00000578700 IGLV5-37A0A075B6J1 123 aa6.48□□□□□ -1.37
SS18-210ENST00000578700 ZNF73O43830 326 aaPredicted RBP6.48□□□□□ -1.37
SS18-210ENST00000578700 OXTP01178 125 aa6.48□□□□□ -1.37
SS18-210ENST00000578700 SCXQ7RTU7 201 aa6.48□□□□□ -1.37
SS18-210ENST00000578700 MTURNQ8N3F0 131 aa6.48□□□□□ -1.37
SS18-210ENST00000578700 PRO0461Q9UI25 63 aa6.48□□□□□ -1.37
SS18-210ENST00000578700 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
SS18-210ENST00000578700 TRBV7-6A0A0J9YX20 115 aa6.47□□□□□ -1.37
SS18-210ENST00000578700 GHRHP01286 108 aa6.47□□□□□ -1.37
SS18-210ENST00000578700 COX7BP24311 80 aa6.47□□□□□ -1.37
SS18-210ENST00000578700 Q6ZSA8 131 aa6.47□□□□□ -1.37
SS18-210ENST00000578700 C9orf163Q8N9P6 203 aa6.47□□□□□ -1.37
SS18-210ENST00000578700 IGKV2-24A0A0C4DH68 120 aa6.46□□□□□ -1.38
SS18-210ENST00000578700 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
SS18-210ENST00000578700 ETDBQ3ZM63 59 aa6.46□□□□□ -1.38
SS18-210ENST00000578700 FAM19A5Q7Z5A7 132 aaPredicted RBP6.46□□□□□ -1.38
SS18-210ENST00000578700 TEN1Q86WV5 123 aa6.46□□□□□ -1.38
SS18-210ENST00000578700 C7orf33Q8WU49 177 aa6.46□□□□□ -1.38
SS18-210ENST00000578700 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
SS18-210ENST00000578700 A0A087WYN8 130 aa6.45□□□□□ -1.38
SS18-210ENST00000578700 A0A096LNI7 61 aa6.45□□□□□ -1.38
SS18-210ENST00000578700 OCIAD2Q56VL3 154 aa6.45□□□□□ -1.38
SS18-210ENST00000578700 MRPL55Q7Z7F7 128 aaKnown RBP6.45□□□□□ -1.38
SS18-210ENST00000578700 DPH3Q96FX2 82 aa6.45□□□□□ -1.38
SS18-210ENST00000578700 hADV29S1A0JD25 119 aa6.44□□□□□ -1.38
SS18-210ENST00000578700 H3BQ85 93 aa6.44□□□□□ -1.38
SS18-210ENST00000578700 PRYO14603 147 aa6.44□□□□□ -1.38
SS18-210ENST00000578700 BAALC-AS2P0C853 105 aa6.44□□□□□ -1.38
SS18-210ENST00000578700 PPDPFLQ8WWR9 84 aa6.44□□□□□ -1.38
SS18-210ENST00000578700 FAM218AQ96MZ4 157 aa6.44□□□□□ -1.38
SS18-210ENST00000578700 ORMDL1Q9P0S3 153 aa6.44□□□□□ -1.38
SS18-210ENST00000578700 C22orf24Q9Y442 160 aa6.44□□□□□ -1.38
SS18-210ENST00000578700 TNXBP22105 4242 aa6.43□□□□□ -1.38
SS18-210ENST00000578700 FAM168BA1KXE4 195 aa6.43□□□□□ -1.38
SS18-210ENST00000578700 LINC00575Q6W349 94 aa6.43□□□□□ -1.38
SS18-210ENST00000578700 CIRBP-AS1Q8TBR5 109 aa6.43□□□□□ -1.38
SS18-210ENST00000578700 LINC01600Q96MT4 127 aa6.43□□□□□ -1.38
SS18-210ENST00000578700 KCNQ1DNQ9H478 68 aa6.43□□□□□ -1.38
SS18-210ENST00000578700 LRP2P98164 4655 aa6.43□□□□□ -1.38
SS18-210ENST00000578700 ETDCA0A1B0GVM5 59 aa6.42□□□□□ -1.38
SS18-210ENST00000578700 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
SS18-210ENST00000578700 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
SS18-210ENST00000578700 LINC00167Q96N53 147 aa6.42□□□□□ -1.38
SS18-210ENST00000578700 IGLV1-50A0A075B6I6 118 aa6.41□□□□□ -1.38
SS18-210ENST00000578700 RPL37AP8A6NKH3 93 aa6.41□□□□□ -1.38
SS18-210ENST00000578700 RPL37AP61513 92 aaKnown RBP6.41□□□□□ -1.38
SS18-210ENST00000578700 SDIM1Q6ZPB5 146 aa6.41□□□□□ -1.38
SS18-210ENST00000578700 TMEM256-PLSCR3K7ERE1 68 aa6.4□□□□□ -1.38
SS18-210ENST00000578700 UBE2BP63146 152 aa6.4□□□□□ -1.38
SS18-210ENST00000578700 REG3GQ6UW15 175 aa6.39□□□□□ -1.39
SS18-210ENST00000578700 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.39□□□□□ -1.39
SS18-210ENST00000578700 DHRS4-AS1Q9P1J3 65 aa6.39□□□□□ -1.39
SS18-210ENST00000578700 TEX49A0A1B0GTD5 131 aa6.37□□□□□ -1.39
SS18-210ENST00000578700 A0A1W2PNN7 141 aa6.37□□□□□ -1.39
SS18-210ENST00000578700 CHTF8P0CG12 524 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms