RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 KRTAP11-1Q8IUC1 163 aa1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 LINC00269Q8N2A0 174 aa1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 GATD1Q8NB37 220 aa1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 RETNLBQ9BQ08 111 aa1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 ANAPC13Q9BS18 74 aa1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 HIGD1BQ9P298 99 aa1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 TRAV8-4A0A0B4J246 113 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 A0A1W2PNN7 141 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 A8MWV9 139 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 C9JAW5 83 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 F8W1H4 67 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 CRPP02741 224 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 KRTAP1-4P0C5Y4 121 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 SPINK8P0C7L1 97 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 RPL39P62891 51 aaKnown RBP1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 TAL2Q16559 108 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 HIGD2BQ4VC39 106 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 RNASE13Q5GAN3 156 aaKnown RBP1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 C1orf137Q5JT78 98 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 C2orf66Q6UXQ4 117 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 ANKRD29Q8N6D5 301 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 PTH2Q96A98 100 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 LINC00526Q96FQ7 95 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 KIR2DL4Q99706 377 aa1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 GEMIN7Q9H840 131 aaKnown RBP1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 SPANXB1Q9NS25 103 aaPredicted RBP1.74□□□□□ -2.13
CHMP4A-208ENST00000534106 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 FLGP20930 4061 aaPredicted RBP1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 TRBV7-3A0A075B6L6 115 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 TRBV7-9A0A0J9YWB2 115 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 C11orf86A6NJI1 115 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 E9PLD3 99 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 SNCGO76070 127 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 MT-ATP8P03928 68 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 SCGB1A1P11684 91 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 RNASE3P12724 160 aaKnown RBP1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 RPL13AP40429 203 aaKnown RBP1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 PMVKQ15126 192 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 LINC00242Q5T6M2 205 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 NTM-AS1Q6ZSK4 140 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 PHF5AQ7RTV0 110 aaKnown RBP1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 C15orf56Q8N910 161 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 PPDPFLQ8WWR9 84 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 TOMM6Q96B49 74 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 C9orf85Q96MD7 179 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 C20orf78Q9BR46 151 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 PRR34Q9NV39 138 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 SS18L2Q9UHA2 77 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 ERG28Q9UKR5 140 aa1.73□□□□□ -2.13
CHMP4A-208ENST00000534106 IGLV4-60A0A075B6I1 120 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 TRBV6-8A0A0A6YYG3 113 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 TRAV12-1A0A0B4J245 112 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 IGKV3OR2-268A0A0C4DH90 116 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 IGKV2-29A2NJV5 120 aaPredicted RBP1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 RBAKDNA6NC62 111 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 J3QQQ9 107 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 LEPROTO15243 131 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 SLC25A20O43772 301 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 TCL1BO95988 128 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 PPP1R17O96001 155 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 TSPEAR-AS2P59090 65 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 UBE2D3P61077 147 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 UBE2D2P62837 147 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 MT1HP80294 61 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 ATXN8Q156A1 80 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 MIAQ16674 131 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 C2orf82Q6UX34 121 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 ZFP2Q6ZN57 461 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 TMEM141Q96I45 108 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 TIMM21Q9BVV7 248 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 VCX2Q9H322 139 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 ANAPC11Q9NYG5 84 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 PRO1854Q9UHT4 67 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 PRO0461Q9UI25 63 aa1.72□□□□□ -2.13
CHMP4A-208ENST00000534106 IGLV1-50A0A075B6I6 118 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 SDHAF1A6NFY7 115 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 RPL37AP8A6NKH3 93 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 H0Y9J4 135 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 UBE2L6O14933 153 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 IGLV7-43P04211 117 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 CRYGAP11844 174 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 REG3AQ06141 175 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 KRTAP19-2Q3LHN2 52 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 MEIG1Q5JSS6 88 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 Q6ZUT4 128 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 MUSTN1Q8IVN3 82 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 C20orf203Q8NBC4 194 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 CLEC2BQ92478 149 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 DIRC1Q969H9 104 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 ZNF625Q96I27 306 aaPredicted RBP1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 CHCHD7Q9BUK0 85 aa1.71□□□□□ -2.14
CHMP4A-208ENST00000534106 IGLV4-69A0A075B6H9 119 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 TRBV20-1A0A075B6N2 111 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 A0A0J9YXY3 114 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 FAM168BA1KXE4 195 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 LINC01546A6NGU7 62 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 A8MU10 97 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 I3L3M4 83 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms