RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PAPPA-AS1Q5QFB9 102 aa3.45□□□□□ -1.86
PDLIM1-203ENST00000490391 TMEM136Q6ZRR5 245 aa3.45□□□□□ -1.86
PDLIM1-203ENST00000490391 ST20-AS1Q8NBB2 130 aa3.45□□□□□ -1.86
PDLIM1-203ENST00000490391 ZNF625Q96I27 306 aaPredicted RBP3.45□□□□□ -1.86
PDLIM1-203ENST00000490391 KRTAP2-1Q9BYU5 128 aa3.45□□□□□ -1.86
PDLIM1-203ENST00000490391 TRBV20-1A0A075B6N2 111 aa3.44□□□□□ -1.86
PDLIM1-203ENST00000490391 KANTRA0A1W2PQU2 76 aa3.44□□□□□ -1.86
PDLIM1-203ENST00000490391 HMSDA8MTL9 139 aa3.44□□□□□ -1.86
PDLIM1-203ENST00000490391 H7C2G1 150 aa3.44□□□□□ -1.86
PDLIM1-203ENST00000490391 NCR3O14931 201 aa3.44□□□□□ -1.86
PDLIM1-203ENST00000490391 ORMDL2Q53FV1 153 aa3.44□□□□□ -1.86
PDLIM1-203ENST00000490391 ALKAL2Q6UX46 152 aa3.44□□□□□ -1.86
PDLIM1-203ENST00000490391 Q8N8P6 123 aa3.44□□□□□ -1.86
PDLIM1-203ENST00000490391 F8W036 122 aa3.43□□□□□ -1.86
PDLIM1-203ENST00000490391 SPRR1BP22528 89 aa3.43□□□□□ -1.86
PDLIM1-203ENST00000490391 Q1RN00 199 aa3.43□□□□□ -1.86
PDLIM1-203ENST00000490391 C6orf99Q4VX62 202 aa3.43□□□□□ -1.86
PDLIM1-203ENST00000490391 MRPL54Q6P161 138 aaKnown RBP3.43□□□□□ -1.86
PDLIM1-203ENST00000490391 MPLKIPQ8TAP9 179 aa3.43□□□□□ -1.86
PDLIM1-203ENST00000490391 SMIM7Q9BQ49 75 aa3.43□□□□□ -1.86
PDLIM1-203ENST00000490391 ADCYAP1P18509 176 aa3.42□□□□□ -1.86
PDLIM1-203ENST00000490391 C10orf91Q5T1B1 145 aa3.42□□□□□ -1.86
PDLIM1-203ENST00000490391 BOD1L2Q8IYS8 172 aa3.42□□□□□ -1.86
PDLIM1-203ENST00000490391 TOMM6Q96B49 74 aa3.42□□□□□ -1.86
PDLIM1-203ENST00000490391 MAP1LC3AQ9H492 121 aa3.42□□□□□ -1.86
PDLIM1-203ENST00000490391 K7EMI3 77 aa3.41□□□□□ -1.86
PDLIM1-203ENST00000490391 CEBPGP53567 150 aa3.41□□□□□ -1.86
PDLIM1-203ENST00000490391 RPL23P62829 140 aaKnown RBP3.41□□□□□ -1.86
PDLIM1-203ENST00000490391 CST9LQ9H4G1 147 aa3.41□□□□□ -1.86
PDLIM1-203ENST00000490391 BATF3Q9NR55 127 aa3.41□□□□□ -1.86
PDLIM1-203ENST00000490391 LAMTOR2Q9Y2Q5 125 aa3.41□□□□□ -1.86
PDLIM1-203ENST00000490391 A0A0G2JQZ4 141 aa3.4□□□□□ -1.87
PDLIM1-203ENST00000490391 A0A0U1RRA0 63 aa3.4□□□□□ -1.87
PDLIM1-203ENST00000490391 FAM236DA0A1B0GTK5 79 aa3.4□□□□□ -1.87
PDLIM1-203ENST00000490391 C5orf52A6NGY3 159 aa3.4□□□□□ -1.87
PDLIM1-203ENST00000490391 H3BRM9 83 aa3.4□□□□□ -1.87
PDLIM1-203ENST00000490391 S100A8P05109 93 aa3.4□□□□□ -1.87
PDLIM1-203ENST00000490391 FAM236CP0DP71 79 aa3.4□□□□□ -1.87
PDLIM1-203ENST00000490391 LINC00158P58513 81 aa3.4□□□□□ -1.87
PDLIM1-203ENST00000490391 ERASQ7Z444 233 aa3.4□□□□□ -1.87
PDLIM1-203ENST00000490391 OBSCN-AS1Q96MR7 158 aa3.4□□□□□ -1.87
PDLIM1-203ENST00000490391 A6NN06 94 aa3.39□□□□□ -1.87
PDLIM1-203ENST00000490391 NDUFA13Q9P0J0 144 aa3.39□□□□□ -1.87
PDLIM1-203ENST00000490391 PAM16Q9Y3D7 125 aa3.39□□□□□ -1.87
PDLIM1-203ENST00000490391 ZNF22P17026 224 aaPredicted RBP3.38□□□□□ -1.87
PDLIM1-203ENST00000490391 PMVKQ15126 192 aa3.38□□□□□ -1.87
PDLIM1-203ENST00000490391 SFTA2Q6UW10 78 aa3.38□□□□□ -1.87
PDLIM1-203ENST00000490391 URB1-AS1Q96HZ7 61 aa3.38□□□□□ -1.87
PDLIM1-203ENST00000490391 SCGB3A1Q96QR1 104 aa3.38□□□□□ -1.87
PDLIM1-203ENST00000490391 KRTAP16-1A8MUX0 517 aa3.37□□□□□ -1.87
PDLIM1-203ENST00000490391 IGLC3P0DOY3 106 aa3.37□□□□□ -1.87
PDLIM1-203ENST00000490391 HRES1P13985 223 aa3.37□□□□□ -1.87
PDLIM1-203ENST00000490391 DDTP30046 118 aa3.37□□□□□ -1.87
PDLIM1-203ENST00000490391 S100A12P80511 92 aa3.37□□□□□ -1.87
PDLIM1-203ENST00000490391 JOSD1Q15040 202 aaPredicted RBP3.37□□□□□ -1.87
PDLIM1-203ENST00000490391 SLC25A34Q6PIV7 304 aa3.37□□□□□ -1.87
PDLIM1-203ENST00000490391 PRO1933Q9H354 126 aa3.37□□□□□ -1.87
PDLIM1-203ENST00000490391 LOC107984156A0A0G2JMH3 177 aa3.36□□□□□ -1.87
PDLIM1-203ENST00000490391 SMIM13P0DJ93 91 aa3.36□□□□□ -1.87
PDLIM1-203ENST00000490391 ARL17AQ8IVW1 177 aa3.36□□□□□ -1.87
PDLIM1-203ENST00000490391 MIR7-3HGQ8N6C7 128 aa3.36□□□□□ -1.87
PDLIM1-203ENST00000490391 NXT2Q9NPJ8 142 aaKnown RBP3.36□□□□□ -1.87
PDLIM1-203ENST00000490391 LAMTOR3Q9UHA4 124 aa3.36□□□□□ -1.87
PDLIM1-203ENST00000490391 TRBV10-2A0A0K0K1G8 114 aa3.35□□□□□ -1.87
PDLIM1-203ENST00000490391 A8MUU9 505 aa3.35□□□□□ -1.87
PDLIM1-203ENST00000490391 SPRR2EP22531 72 aa3.35□□□□□ -1.87
PDLIM1-203ENST00000490391 G0S2P27469 103 aa3.35□□□□□ -1.87
PDLIM1-203ENST00000490391 SPRR2BP35325 72 aa3.35□□□□□ -1.87
PDLIM1-203ENST00000490391 SPRR2AP35326 72 aa3.35□□□□□ -1.87
PDLIM1-203ENST00000490391 ATP5L2Q7Z4Y8 100 aa3.35□□□□□ -1.87
PDLIM1-203ENST00000490391 SRP19P09132 144 aaKnown RBP3.34□□□□□ -1.87
PDLIM1-203ENST00000490391 AKR1D1P51857 326 aa3.34□□□□□ -1.87
PDLIM1-203ENST00000490391 ADIRFQ15847 76 aa3.34□□□□□ -1.87
PDLIM1-203ENST00000490391 PCP2Q8IVA1 136 aa3.34□□□□□ -1.87
PDLIM1-203ENST00000490391 TRAV23DV6A0A075B6W5 121 aa3.33□□□□□ -1.88
PDLIM1-203ENST00000490391 A8MWP4 228 aa3.33□□□□□ -1.88
PDLIM1-203ENST00000490391 ZNF73O43830 326 aaPredicted RBP3.33□□□□□ -1.88
PDLIM1-203ENST00000490391 Q6ZVH6 145 aa3.33□□□□□ -1.88
PDLIM1-203ENST00000490391 FA2HQ7L5A8 372 aa3.33□□□□□ -1.88
PDLIM1-203ENST00000490391 TCL1BO95988 128 aa3.32□□□□□ -1.88
PDLIM1-203ENST00000490391 IGFL1Q6UW32 110 aa3.32□□□□□ -1.88
PDLIM1-203ENST00000490391 Q96NJ1 140 aa3.32□□□□□ -1.88
PDLIM1-203ENST00000490391 RBM12B-AS1Q9P1G2 102 aa3.32□□□□□ -1.88
PDLIM1-203ENST00000490391 LINC01546A6NGU7 62 aa3.31□□□□□ -1.88
PDLIM1-203ENST00000490391 C11orf86A6NJI1 115 aa3.31□□□□□ -1.88
PDLIM1-203ENST00000490391 ATP6V1G1O75348 118 aa3.31□□□□□ -1.88
PDLIM1-203ENST00000490391 MT1BP07438 61 aa3.31□□□□□ -1.88
PDLIM1-203ENST00000490391 SPANXB1Q9NS25 103 aaPredicted RBP3.31□□□□□ -1.88
PDLIM1-203ENST00000490391 LINC01549A6NIU2 74 aa3.3□□□□□ -1.88
PDLIM1-203ENST00000490391 MEIG1Q5JSS6 88 aa3.3□□□□□ -1.88
PDLIM1-203ENST00000490391 NOTCH2NLQ7Z3S9 236 aa3.3□□□□□ -1.88
PDLIM1-203ENST00000490391 SPRR2FQ96RM1 72 aa3.3□□□□□ -1.88
PDLIM1-203ENST00000490391 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
PDLIM1-203ENST00000490391 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
PDLIM1-203ENST00000490391 SLC51BQ86UW2 128 aa3.29□□□□□ -1.88
PDLIM1-203ENST00000490391 DHRS4-AS1Q9P1J3 65 aa3.29□□□□□ -1.88
PDLIM1-203ENST00000490391 NAT8Q9UHE5 227 aa3.29□□□□□ -1.88
PDLIM1-203ENST00000490391 UBE2V1Q13404 147 aa3.28□□□□□ -1.88
PDLIM1-203ENST00000490391 S100A7L2Q5SY68 101 aa3.28□□□□□ -1.88
PDLIM1-203ENST00000490391 TMEM170BQ5T4T1 132 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms