RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 MT3P25713 68 aa4.05□□□□□ -1.76
XRN1-212ENST00000486211 ORMDL2Q53FV1 153 aa4.05□□□□□ -1.76
XRN1-212ENST00000486211 Q75L30 129 aa4.05□□□□□ -1.76
XRN1-212ENST00000486211 ST20-AS1Q8NBB2 130 aa4.05□□□□□ -1.76
XRN1-212ENST00000486211 NDUFA13Q9P0J0 144 aa4.05□□□□□ -1.76
XRN1-212ENST00000486211 H7C2G1 150 aa4.04□□□□□ -1.76
XRN1-212ENST00000486211 CEBPGP53567 150 aa4.04□□□□□ -1.76
XRN1-212ENST00000486211 CD164Q04900 197 aa4.04□□□□□ -1.76
XRN1-212ENST00000486211 MRPL54Q6P161 138 aaKnown RBP4.04□□□□□ -1.76
XRN1-212ENST00000486211 SMIM29Q86T20 159 aa4.04□□□□□ -1.76
XRN1-212ENST00000486211 SMIM7Q9BQ49 75 aa4.04□□□□□ -1.76
XRN1-212ENST00000486211 MAP1LC3AQ9H492 121 aa4.04□□□□□ -1.76
XRN1-212ENST00000486211 BATF3Q9NR55 127 aa4.04□□□□□ -1.76
XRN1-212ENST00000486211 ADCYAP1P18509 176 aa4.03□□□□□ -1.76
XRN1-212ENST00000486211 ALKAL2Q6UX46 152 aa4.03□□□□□ -1.76
XRN1-212ENST00000486211 TOMM6Q96B49 74 aa4.03□□□□□ -1.76
XRN1-212ENST00000486211 LAMTOR2Q9Y2Q5 125 aa4.03□□□□□ -1.76
XRN1-212ENST00000486211 TRBV20-1A0A075B6N2 111 aa4.02□□□□□ -1.77
XRN1-212ENST00000486211 K7EMI3 77 aa4.02□□□□□ -1.77
XRN1-212ENST00000486211 S100A8P05109 93 aa4.02□□□□□ -1.77
XRN1-212ENST00000486211 SPRR1BP22528 89 aa4.02□□□□□ -1.77
XRN1-212ENST00000486211 RPL23P62829 140 aaKnown RBP4.02□□□□□ -1.77
XRN1-212ENST00000486211 ERASQ7Z444 233 aa4.02□□□□□ -1.77
XRN1-212ENST00000486211 BOD1L2Q8IYS8 172 aa4.02□□□□□ -1.77
XRN1-212ENST00000486211 CST9LQ9H4G1 147 aa4.02□□□□□ -1.77
XRN1-212ENST00000486211 H3BRM9 83 aa4.01□□□□□ -1.77
XRN1-212ENST00000486211 LINC00158P58513 81 aa4.01□□□□□ -1.77
XRN1-212ENST00000486211 Q1RN00 199 aa4.01□□□□□ -1.77
XRN1-212ENST00000486211 A0A0U1RRA0 63 aa4□□□□□ -1.77
XRN1-212ENST00000486211 URB1-AS1Q96HZ7 61 aa4□□□□□ -1.77
XRN1-212ENST00000486211 SCGB3A1Q96QR1 104 aa4□□□□□ -1.77
XRN1-212ENST00000486211 PMVKQ15126 192 aa3.99□□□□□ -1.77
XRN1-212ENST00000486211 C6orf99Q4VX62 202 aa3.99□□□□□ -1.77
XRN1-212ENST00000486211 C10orf91Q5T1B1 145 aa3.99□□□□□ -1.77
XRN1-212ENST00000486211 IGLC3P0DOY3 106 aa3.98□□□□□ -1.77
XRN1-212ENST00000486211 ZNF22P17026 224 aaPredicted RBP3.98□□□□□ -1.77
XRN1-212ENST00000486211 SFTA2Q6UW10 78 aa3.98□□□□□ -1.77
XRN1-212ENST00000486211 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
XRN1-212ENST00000486211 PAM16Q9Y3D7 125 aa3.98□□□□□ -1.77
XRN1-212ENST00000486211 FAM236DA0A1B0GTK5 79 aa3.97□□□□□ -1.77
XRN1-212ENST00000486211 FAM236CP0DP71 79 aa3.97□□□□□ -1.77
XRN1-212ENST00000486211 G0S2P27469 103 aa3.97□□□□□ -1.77
XRN1-212ENST00000486211 DDTP30046 118 aa3.97□□□□□ -1.77
XRN1-212ENST00000486211 S100A12P80511 92 aa3.97□□□□□ -1.77
XRN1-212ENST00000486211 OBSCN-AS1Q96MR7 158 aa3.97□□□□□ -1.77
XRN1-212ENST00000486211 NXT2Q9NPJ8 142 aaKnown RBP3.97□□□□□ -1.77
XRN1-212ENST00000486211 A0A0G2JQZ4 141 aa3.96□□□□□ -1.78
XRN1-212ENST00000486211 SRP19P09132 144 aaKnown RBP3.96□□□□□ -1.78
XRN1-212ENST00000486211 SMIM13P0DJ93 91 aa3.96□□□□□ -1.78
XRN1-212ENST00000486211 JOSD1Q15040 202 aaPredicted RBP3.96□□□□□ -1.78
XRN1-212ENST00000486211 SLC25A34Q6PIV7 304 aa3.96□□□□□ -1.78
XRN1-212ENST00000486211 ATP5L2Q7Z4Y8 100 aa3.96□□□□□ -1.78
XRN1-212ENST00000486211 PRO1933Q9H354 126 aa3.96□□□□□ -1.78
XRN1-212ENST00000486211 LAMTOR3Q9UHA4 124 aa3.96□□□□□ -1.78
XRN1-212ENST00000486211 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
XRN1-212ENST00000486211 ADIRFQ15847 76 aa3.95□□□□□ -1.78
XRN1-212ENST00000486211 MIR7-3HGQ8N6C7 128 aa3.95□□□□□ -1.78
XRN1-212ENST00000486211 TRBV10-2A0A0K0K1G8 114 aa3.93□□□□□ -1.78
XRN1-212ENST00000486211 A6NN06 94 aa3.93□□□□□ -1.78
XRN1-212ENST00000486211 LOC107984156A0A0G2JMH3 177 aa3.92□□□□□ -1.78
XRN1-212ENST00000486211 HRES1P13985 223 aa3.92□□□□□ -1.78
XRN1-212ENST00000486211 AKR1D1P51857 326 aa3.92□□□□□ -1.78
XRN1-212ENST00000486211 FA2HQ7L5A8 372 aa3.92□□□□□ -1.78
XRN1-212ENST00000486211 PCP2Q8IVA1 136 aa3.92□□□□□ -1.78
XRN1-212ENST00000486211 ARL17AQ8IVW1 177 aa3.92□□□□□ -1.78
XRN1-212ENST00000486211 TRAV23DV6A0A075B6W5 121 aa3.91□□□□□ -1.78
XRN1-212ENST00000486211 A8MUU9 505 aa3.91□□□□□ -1.78
XRN1-212ENST00000486211 KRTAP16-1A8MUX0 517 aa3.91□□□□□ -1.78
XRN1-212ENST00000486211 ZNF73O43830 326 aaPredicted RBP3.91□□□□□ -1.78
XRN1-212ENST00000486211 ATP6V1G1O75348 118 aa3.91□□□□□ -1.78
XRN1-212ENST00000486211 SLC51BQ86UW2 128 aa3.91□□□□□ -1.78
XRN1-212ENST00000486211 NAT8Q9UHE5 227 aa3.91□□□□□ -1.78
XRN1-212ENST00000486211 LINC01546A6NGU7 62 aa3.9□□□□□ -1.79
XRN1-212ENST00000486211 LINC01549A6NIU2 74 aa3.9□□□□□ -1.79
XRN1-212ENST00000486211 C11orf86A6NJI1 115 aa3.9□□□□□ -1.79
XRN1-212ENST00000486211 TCL1BO95988 128 aa3.9□□□□□ -1.79
XRN1-212ENST00000486211 MEIG1Q5JSS6 88 aa3.89□□□□□ -1.79
XRN1-212ENST00000486211 Q6ZVH6 145 aa3.89□□□□□ -1.79
XRN1-212ENST00000486211 Q96NJ1 140 aa3.89□□□□□ -1.79
XRN1-212ENST00000486211 SPANXB1Q9NS25 103 aaPredicted RBP3.89□□□□□ -1.79
XRN1-212ENST00000486211 RBM12B-AS1Q9P1G2 102 aa3.89□□□□□ -1.79
XRN1-212ENST00000486211 A8MWP4 228 aa3.88□□□□□ -1.79
XRN1-212ENST00000486211 C9JQL5 133 aa3.88□□□□□ -1.79
XRN1-212ENST00000486211 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
XRN1-212ENST00000486211 IGFL1Q6UW32 110 aa3.88□□□□□ -1.79
XRN1-212ENST00000486211 SPRR2EP22531 72 aa3.87□□□□□ -1.79
XRN1-212ENST00000486211 SPRR2BP35325 72 aa3.87□□□□□ -1.79
XRN1-212ENST00000486211 SPRR2AP35326 72 aa3.87□□□□□ -1.79
XRN1-212ENST00000486211 S100A7L2Q5SY68 101 aa3.87□□□□□ -1.79
XRN1-212ENST00000486211 TMEM170BQ5T4T1 132 aa3.87□□□□□ -1.79
XRN1-212ENST00000486211 NDUFA6P56556 154 aa3.86□□□□□ -1.79
XRN1-212ENST00000486211 DHRS4-AS1Q9P1J3 65 aa3.86□□□□□ -1.79
XRN1-212ENST00000486211 TEX49A0A1B0GTD5 131 aa3.85□□□□□ -1.79
XRN1-212ENST00000486211 TMEM223A0PJW6 202 aa3.85□□□□□ -1.79
XRN1-212ENST00000486211 HERV-K104P63124 156 aa3.85□□□□□ -1.79
XRN1-212ENST00000486211 NOTCH2NLQ7Z3S9 236 aa3.85□□□□□ -1.79
XRN1-212ENST00000486211 DEFB105AQ8NG35 78 aa3.85□□□□□ -1.79
XRN1-212ENST00000486211 A0A096LNJ9 63 aa3.84□□□□□ -1.79
XRN1-212ENST00000486211 NDUFC2O95298 119 aa3.84□□□□□ -1.79
XRN1-212ENST00000486211 TAL2Q16559 108 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms