RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SCGB1C2P0DMR2 95 aa14.11□□□□□ -0.15
USP6NL-204ENST00000606752 WFDC2Q14508 124 aa14.1□□□□□ -0.15
USP6NL-204ENST00000606752 M0R2N4 97 aa14.08□□□□□ -0.15
USP6NL-204ENST00000606752 TRIAP1O43715 76 aa14.08□□□□□ -0.15
USP6NL-204ENST00000606752 XAGE1AQ9HD64 81 aa14.08□□□□□ -0.16
USP6NL-204ENST00000606752 PRR3P79522 188 aaKnown RBP14.07□□□□□ -0.16
USP6NL-204ENST00000606752 TLX1NBP0CAT3 122 aa14.06□□□□□ -0.16
USP6NL-204ENST00000606752 Q6ZRN7 208 aaPredicted RBP14.06□□□□□ -0.16
USP6NL-204ENST00000606752 Q6ZRP5 223 aa14.06□□□□□ -0.16
USP6NL-204ENST00000606752 Q8NDZ9 215 aa14.06□□□□□ -0.16
USP6NL-204ENST00000606752 COX6CP09669 75 aa14.06□□□□□ -0.16
USP6NL-204ENST00000606752 C14orf177Q52M58 125 aa14.06□□□□□ -0.16
USP6NL-204ENST00000606752 TRBV20-1A0A075B6N2 111 aa14.05□□□□□ -0.16
USP6NL-204ENST00000606752 C3orf84H3BNL1 204 aa14.05□□□□□ -0.16
USP6NL-204ENST00000606752 OR13C6PQ8NH95 151 aa14.05□□□□□ -0.16
USP6NL-204ENST00000606752 GAGE2EQ4V326 116 aa14.04□□□□□ -0.16
USP6NL-204ENST00000606752 Q6ZR54 194 aa14.04□□□□□ -0.16
USP6NL-204ENST00000606752 GAGE2DQ9UEU5 116 aa14.04□□□□□ -0.16
USP6NL-204ENST00000606752 H3BMG7 143 aa14.02□□□□□ -0.16
USP6NL-204ENST00000606752 LY6G6CO95867 125 aa14.02□□□□□ -0.16
USP6NL-204ENST00000606752 TCL1BO95988 128 aa14.02□□□□□ -0.16
USP6NL-204ENST00000606752 LRCOL1A6NCL2 159 aa14.01□□□□□ -0.17
USP6NL-204ENST00000606752 RPL28P46779 137 aaKnown RBP14.01□□□□□ -0.17
USP6NL-204ENST00000606752 CNBPP62633 177 aaKnown RBP14.01□□□□□ -0.17
USP6NL-204ENST00000606752 DNAH10Q8IVF4 4471 aa14.01□□□□□ -0.17
USP6NL-204ENST00000606752 NCR3O14931 201 aa14.01□□□□□ -0.17
USP6NL-204ENST00000606752 RPL18AQ02543 176 aaKnown RBP14□□□□□ -0.17
USP6NL-204ENST00000606752 SMIM11BQ8TCY0 68 aa14□□□□□ -0.17
USP6NL-204ENST00000606752 TMEM126AQ9H061 195 aa14□□□□□ -0.17
USP6NL-204ENST00000606752 TRBV10-2A0A0K0K1G8 114 aa13.99□□□□□ -0.17
USP6NL-204ENST00000606752 LINC00476Q8WZB0 136 aa13.99□□□□□ -0.17
USP6NL-204ENST00000606752 VPREB1P12018 145 aa13.97□□□□□ -0.17
USP6NL-204ENST00000606752 C9orf129Q5T035 196 aaKnown RBP13.97□□□□□ -0.17
USP6NL-204ENST00000606752 LOC107984640A0A0U1RRK4 108 aa13.97□□□□□ -0.17
USP6NL-204ENST00000606752 S100A7L2Q5SY68 101 aa13.97□□□□□ -0.17
USP6NL-204ENST00000606752 ATXN8Q156A1 80 aa13.96□□□□□ -0.17
USP6NL-204ENST00000606752 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.94□□□□□ -0.18
USP6NL-204ENST00000606752 CLEC2BQ92478 149 aa13.93□□□□□ -0.18
USP6NL-204ENST00000606752 F8W1H4 67 aa13.92□□□□□ -0.18
USP6NL-204ENST00000606752 IGLV6-57P01721 117 aa13.92□□□□□ -0.18
USP6NL-204ENST00000606752 GAGE2BQ13066 116 aa13.92□□□□□ -0.18
USP6NL-204ENST00000606752 C1orf134Q5TEV5 83 aa13.92□□□□□ -0.18
USP6NL-204ENST00000606752 M0R378 163 aa13.91□□□□□ -0.18
USP6NL-204ENST00000606752 LST1O00453 97 aa13.91□□□□□ -0.18
USP6NL-204ENST00000606752 PLA2G2DQ9UNK4 145 aa13.91□□□□□ -0.18
USP6NL-204ENST00000606752 KMT2AQ03164 3969 aa13.9□□□□□ -0.18
USP6NL-204ENST00000606752 Q8N814 137 aa13.9□□□□□ -0.18
USP6NL-204ENST00000606752 PRO0461Q9UI25 63 aa13.9□□□□□ -0.18
USP6NL-204ENST00000606752 A0A087WTM6 91 aa13.89□□□□□ -0.19
USP6NL-204ENST00000606752 H0YGX0 51 aa13.89□□□□□ -0.19
USP6NL-204ENST00000606752 TRBV10-3A0A0K0K1G6 114 aa13.87□□□□□ -0.19
USP6NL-204ENST00000606752 LINC01620Q4KN68 170 aa13.87□□□□□ -0.19
USP6NL-204ENST00000606752 SERTAD4-AS1Q5TG53 156 aa13.87□□□□□ -0.19
USP6NL-204ENST00000606752 MTURNQ8N3F0 131 aa13.87□□□□□ -0.19
USP6NL-204ENST00000606752 C9orf163Q8N9P6 203 aa13.87□□□□□ -0.19
USP6NL-204ENST00000606752 C16orf90A8MZG2 172 aa13.86□□□□□ -0.19
USP6NL-204ENST00000606752 NKAPP1Q8N9T2 125 aa13.86□□□□□ -0.19
USP6NL-204ENST00000606752 C9JAW5 83 aa13.85□□□□□ -0.19
USP6NL-204ENST00000606752 FAM218AQ96MZ4 157 aa13.85□□□□□ -0.19
USP6NL-204ENST00000606752 IGLV5-37A0A075B6J1 123 aa13.84□□□□□ -0.19
USP6NL-204ENST00000606752 A0A096LNI7 61 aa13.83□□□□□ -0.2
USP6NL-204ENST00000606752 FAM168BA1KXE4 195 aa13.83□□□□□ -0.2
USP6NL-204ENST00000606752 C6orf99Q4VX62 202 aa13.83□□□□□ -0.2
USP6NL-204ENST00000606752 PKIGQ9Y2B9 76 aa13.83□□□□□ -0.2
USP6NL-204ENST00000606752 DNAH6Q9C0G6 4158 aa13.82□□□□□ -0.2
USP6NL-204ENST00000606752 ALMS1Q8TCU4 4167 aa13.82□□□□□ -0.2
USP6NL-204ENST00000606752 TRAV23DV6A0A075B6W5 121 aa13.82□□□□□ -0.2
USP6NL-204ENST00000606752 TRACP01848 142 aa13.82□□□□□ -0.2
USP6NL-204ENST00000606752 SMCPP49901 116 aaPredicted RBP13.82□□□□□ -0.2
USP6NL-204ENST00000606752 CBY1Q9Y3M2 126 aa13.82□□□□□ -0.2
USP6NL-204ENST00000606752 SLC25A20O43772 301 aa13.8□□□□□ -0.2
USP6NL-204ENST00000606752 KRTAP7-1Q8IUC3 87 aa13.8□□□□□ -0.2
USP6NL-204ENST00000606752 IGKV2-24A0A0C4DH68 120 aa13.8□□□□□ -0.2
USP6NL-204ENST00000606752 C7orf33Q8WU49 177 aa13.8□□□□□ -0.2
USP6NL-204ENST00000606752 SDIM1Q6ZPB5 146 aa13.79□□□□□ -0.2
USP6NL-204ENST00000606752 C22orf24Q9Y442 160 aa13.78□□□□□ -0.2
USP6NL-204ENST00000606752 DNAH2Q9P225 4427 aa13.78□□□□□ -0.2
USP6NL-204ENST00000606752 A0A087WYN8 130 aa13.78□□□□□ -0.2
USP6NL-204ENST00000606752 ZNF73O43830 326 aaPredicted RBP13.77□□□□□ -0.21
USP6NL-204ENST00000606752 FAM19A5Q7Z5A7 132 aaPredicted RBP13.77□□□□□ -0.21
USP6NL-204ENST00000606752 DIRC1Q969H9 104 aa13.77□□□□□ -0.21
USP6NL-204ENST00000606752 M0QXV9 152 aa13.76□□□□□ -0.21
USP6NL-204ENST00000606752 ANKRD29Q8N6D5 301 aa13.76□□□□□ -0.21
USP6NL-204ENST00000606752 LINC01600Q96MT4 127 aa13.76□□□□□ -0.21
USP6NL-204ENST00000606752 ETDBQ3ZM63 59 aa13.75□□□□□ -0.21
USP6NL-204ENST00000606752 MRPL55Q7Z7F7 128 aaKnown RBP13.75□□□□□ -0.21
USP6NL-204ENST00000606752 KCNQ1DNQ9H478 68 aa13.75□□□□□ -0.21
USP6NL-204ENST00000606752 LINC00474Q9P2X8 69 aa13.74□□□□□ -0.21
USP6NL-204ENST00000606752 A0A1B0GX51 115 aa13.74□□□□□ -0.21
USP6NL-204ENST00000606752 H3BT86 120 aa13.74□□□□□ -0.21
USP6NL-204ENST00000606752 LINC00167Q96N53 147 aa13.74□□□□□ -0.21
USP6NL-204ENST00000606752 TRBV7-6A0A0J9YX20 115 aa13.73□□□□□ -0.21
USP6NL-204ENST00000606752 A0A1W2PNN7 141 aa13.73□□□□□ -0.21
USP6NL-204ENST00000606752 DNAL4O96015 105 aa13.73□□□□□ -0.21
USP6NL-204ENST00000606752 CHTF8P0CG12 524 aa13.73□□□□□ -0.21
USP6NL-204ENST00000606752 IGLV1-50A0A075B6I6 118 aa13.72□□□□□ -0.21
USP6NL-204ENST00000606752 RTL8CO15255 209 aa13.72□□□□□ -0.21
USP6NL-204ENST00000606752 TNP2Q05952 138 aa13.72□□□□□ -0.21
USP6NL-204ENST00000606752 LINC00575Q6W349 94 aa13.71□□□□□ -0.21
USP6NL-204ENST00000606752 RPL37AP8A6NKH3 93 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms