RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 PRLHP81277 87 aa6.81□□□□□ -1.32
CSMD1-217ENST00000602723 IGKV2D-30A0A075B6S6 120 aa6.81□□□□□ -1.32
CSMD1-217ENST00000602723 IGKV2-30P06310 120 aa6.81□□□□□ -1.32
CSMD1-217ENST00000602723 OXLD1Q5BKU9 147 aa6.81□□□□□ -1.32
CSMD1-217ENST00000602723 Q9UF83 564 aa6.81□□□□□ -1.32
CSMD1-217ENST00000602723 HELZ2Q9BYK8 2649 aaKnown RBP6.8□□□□□ -1.32
CSMD1-217ENST00000602723 IGLV1-51P01701 117 aa6.8□□□□□ -1.32
CSMD1-217ENST00000602723 LINC01561Q8N1V8 128 aa6.8□□□□□ -1.32
CSMD1-217ENST00000602723 SPAG11AQ6PDA7 123 aa6.79□□□□□ -1.32
CSMD1-217ENST00000602723 Q6ZTC4 211 aa6.79□□□□□ -1.32
CSMD1-217ENST00000602723 C7orf65Q6ZTY9 151 aa6.79□□□□□ -1.32
CSMD1-217ENST00000602723 SMIM29Q86T20 159 aa6.78□□□□□ -1.32
CSMD1-217ENST00000602723 BRI3O95415 125 aa6.78□□□□□ -1.32
CSMD1-217ENST00000602723 Q8N2B8 174 aa6.77□□□□□ -1.33
CSMD1-217ENST00000602723 LINC01546A6NGU7 62 aa6.77□□□□□ -1.33
CSMD1-217ENST00000602723 AVPP01185 164 aa6.77□□□□□ -1.33
CSMD1-217ENST00000602723 TP53AIP1Q9HCN2 124 aa6.77□□□□□ -1.33
CSMD1-217ENST00000602723 A0A1B0GU69 56 aa6.77□□□□□ -1.33
CSMD1-217ENST00000602723 GCN1Q92616 2671 aaKnown RBP6.77□□□□□ -1.33
CSMD1-217ENST00000602723 MAP1AP78559 2803 aaPredicted RBP6.77□□□□□ -1.33
CSMD1-217ENST00000602723 IGLV5-39A0A0G2JS06 123 aa6.76□□□□□ -1.33
CSMD1-217ENST00000602723 C4orf26Q17RF5 130 aa6.76□□□□□ -1.33
CSMD1-217ENST00000602723 TEX15Q9BXT5 2789 aa6.76□□□□□ -1.33
CSMD1-217ENST00000602723 BAHCC1Q9P281 2608 aa6.75□□□□□ -1.33
CSMD1-217ENST00000602723 CDSNQ15517 529 aa6.75□□□□□ -1.33
CSMD1-217ENST00000602723 COL6A5A8TX70 2615 aa6.75□□□□□ -1.33
CSMD1-217ENST00000602723 SPATA3Q8NHX4 192 aa6.75□□□□□ -1.33
CSMD1-217ENST00000602723 LYPD5Q6UWN5 251 aa6.75□□□□□ -1.33
CSMD1-217ENST00000602723 ACYP2P14621 99 aa6.74□□□□□ -1.33
CSMD1-217ENST00000602723 KIAA0087Q14695 138 aa6.74□□□□□ -1.33
CSMD1-217ENST00000602723 C6orf48Q9UBA6 75 aa6.74□□□□□ -1.33
CSMD1-217ENST00000602723 Q6ZRU5 148 aa6.73□□□□□ -1.33
CSMD1-217ENST00000602723 DMBT1Q9UGM3 2413 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-217ENST00000602723 RPS28P62857 69 aaKnown RBP6.73□□□□□ -1.33
CSMD1-217ENST00000602723 UNC79Q9P2D8 2635 aa6.73□□□□□ -1.33
CSMD1-217ENST00000602723 SMR3AQ99954 134 aa6.72□□□□□ -1.33
CSMD1-217ENST00000602723 C1orf134Q5TEV5 83 aa6.71□□□□□ -1.34
CSMD1-217ENST00000602723 MOBPQ13875 183 aa6.7□□□□□ -1.34
CSMD1-217ENST00000602723 C22orf24Q9Y442 160 aa6.7□□□□□ -1.34
CSMD1-217ENST00000602723 ATP11AUNQ6ZP68 121 aa6.7□□□□□ -1.34
CSMD1-217ENST00000602723 FSHBP01225 129 aa6.7□□□□□ -1.34
CSMD1-217ENST00000602723 PLA2G2AP14555 144 aa6.7□□□□□ -1.34
CSMD1-217ENST00000602723 SMCR5Q8TEV8 140 aa6.7□□□□□ -1.34
CSMD1-217ENST00000602723 C11orf72Q8NBR9 251 aa6.69□□□□□ -1.34
CSMD1-217ENST00000602723 C8orf87E5RJ46 101 aa6.69□□□□□ -1.34
CSMD1-217ENST00000602723 VPREB1P12018 145 aa6.69□□□□□ -1.34
CSMD1-217ENST00000602723 IGHV3OR16-9A0A0B4J2B5 98 aa6.69□□□□□ -1.34
CSMD1-217ENST00000602723 FAM218AQ96MZ4 157 aa6.69□□□□□ -1.34
CSMD1-217ENST00000602723 BCE1O60756 84 aa6.69□□□□□ -1.34
CSMD1-217ENST00000602723 TEP1Q99973 2627 aaKnown RBP6.69□□□□□ -1.34
CSMD1-217ENST00000602723 A0A1B0GW54 56 aa6.69□□□□□ -1.34
CSMD1-217ENST00000602723 LOC110117498A0A087WWA1 95 aa6.68□□□□□ -1.34
CSMD1-217ENST00000602723 PRO0461Q9UI25 63 aa6.68□□□□□ -1.34
CSMD1-217ENST00000602723 C16orf95Q9H693 158 aa6.68□□□□□ -1.34
CSMD1-217ENST00000602723 KIF25-AS1Q9Y6Z4 181 aa6.68□□□□□ -1.34
CSMD1-217ENST00000602723 SMCPP49901 116 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-217ENST00000602723 Q6ZQT0 140 aa6.67□□□□□ -1.34
CSMD1-217ENST00000602723 TRAV22A0A0B4J277 110 aa6.67□□□□□ -1.34
CSMD1-217ENST00000602723 SPACA4Q8TDM5 124 aa6.67□□□□□ -1.34
CSMD1-217ENST00000602723 IGLV8-61A0A075B6I0 122 aa6.66□□□□□ -1.34
CSMD1-217ENST00000602723 EP400Q96L91 3159 aa6.66□□□□□ -1.34
CSMD1-217ENST00000602723 IGLV5-45A0A087WSX0 123 aa6.66□□□□□ -1.34
CSMD1-217ENST00000602723 COL4A2P08572 1712 aa6.66□□□□□ -1.34
CSMD1-217ENST00000602723 H3BPC8 53 aa6.66□□□□□ -1.34
CSMD1-217ENST00000602723 STAB2Q8WWQ8 2551 aa6.66□□□□□ -1.34
CSMD1-217ENST00000602723 TM2D3Q9BRN9 247 aa6.65□□□□□ -1.35
CSMD1-217ENST00000602723 PLA2G1BP04054 148 aaKnown RBP6.65□□□□□ -1.35
CSMD1-217ENST00000602723 KRTAP10-9P60411 292 aa6.65□□□□□ -1.35
CSMD1-217ENST00000602723 Q6ZRX8 168 aa6.64□□□□□ -1.35
CSMD1-217ENST00000602723 LINC00167Q96N53 147 aa6.64□□□□□ -1.35
CSMD1-217ENST00000602723 ELOF1P60002 83 aaKnown RBP6.64□□□□□ -1.35
CSMD1-217ENST00000602723 Q8NBF4 154 aa6.64□□□□□ -1.35
CSMD1-217ENST00000602723 FHL3Q13643 280 aa6.64□□□□□ -1.35
CSMD1-217ENST00000602723 SPINT4Q6UDR6 99 aa6.64□□□□□ -1.35
CSMD1-217ENST00000602723 SETXQ7Z333 2677 aaKnown RBP6.62□□□□□ -1.35
CSMD1-217ENST00000602723 LINC00476Q8WZB0 136 aa6.61□□□□□ -1.35
CSMD1-217ENST00000602723 A0A1W2PPR1 153 aa6.61□□□□□ -1.35
CSMD1-217ENST00000602723 FAM19A4Q96LR4 140 aa6.61□□□□□ -1.35
CSMD1-217ENST00000602723 SRCAPQ6ZRS2 3230 aa6.6□□□□□ -1.35
CSMD1-217ENST00000602723 LINC00315P59091 139 aa6.6□□□□□ -1.35
CSMD1-217ENST00000602723 LINC00313P59037 77 aa6.59□□□□□ -1.35
CSMD1-217ENST00000602723 CEP350Q5VT06 3117 aa6.59□□□□□ -1.35
CSMD1-217ENST00000602723 EPM2AB3EWF7 344 aa6.59□□□□□ -1.35
CSMD1-217ENST00000602723 ERC2-IT1O76042 136 aa6.58□□□□□ -1.36
CSMD1-217ENST00000602723 NHLRC4P0CG21 123 aaPredicted RBP6.57□□□□□ -1.36
CSMD1-217ENST00000602723 SSBP3-AS1Q7Z2R9 100 aa6.57□□□□□ -1.36
CSMD1-217ENST00000602723 CHTF8P0CG12 524 aa6.57□□□□□ -1.36
CSMD1-217ENST00000602723 MDFIQ99750 246 aa6.57□□□□□ -1.36
CSMD1-217ENST00000602723 RPL37AP61513 92 aaKnown RBP6.56□□□□□ -1.36
CSMD1-217ENST00000602723 PRO3102Q9H379 93 aa6.56□□□□□ -1.36
CSMD1-217ENST00000602723 LOC101927531A0A1B0GV80 90 aa6.55□□□□□ -1.36
CSMD1-217ENST00000602723 ZNF292O60281 2723 aa6.55□□□□□ -1.36
CSMD1-217ENST00000602723 TRBV7-4A0A0J9YYF1 115 aa6.55□□□□□ -1.36
CSMD1-217ENST00000602723 LINC01600Q96MT4 127 aa6.55□□□□□ -1.36
CSMD1-217ENST00000602723 C16orf90A8MZG2 172 aa6.55□□□□□ -1.36
CSMD1-217ENST00000602723 A8MWP4 228 aa6.54□□□□□ -1.36
CSMD1-217ENST00000602723 COA5Q86WW8 74 aa6.54□□□□□ -1.36
CSMD1-217ENST00000602723 ST20-AS1Q8NBB2 130 aa6.54□□□□□ -1.36
CSMD1-217ENST00000602723 GVQW2A0A096LPI5 108 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-217ENST00000602723 IGLV6-57P01721 117 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms