RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 TTC32Q5I0X7 151 aa8.31□□□□□ -1.08
USP3-213ENST00000559711 Q8NDZ9 215 aa8.31□□□□□ -1.08
USP3-213ENST00000559711 NBDYA0A0U1RRE5 68 aa8.3□□□□□ -1.08
USP3-213ENST00000559711 PRR3P79522 188 aaKnown RBP8.3□□□□□ -1.08
USP3-213ENST00000559711 ATXN8Q156A1 80 aa8.3□□□□□ -1.08
USP3-213ENST00000559711 STARD9Q9P2P6 4700 aa8.3□□□□□ -1.08
USP3-213ENST00000559711 VPS13DQ5THJ4 4388 aa8.3□□□□□ -1.08
USP3-213ENST00000559711 SMIM11BQ8TCY0 68 aa8.3□□□□□ -1.08
USP3-213ENST00000559711 CARD19Q96LW7 228 aa8.3□□□□□ -1.08
USP3-213ENST00000559711 TLX1NBP0CAT3 122 aa8.29□□□□□ -1.08
USP3-213ENST00000559711 WFDC2Q14508 124 aa8.29□□□□□ -1.08
USP3-213ENST00000559711 OR13C6PQ8NH95 151 aa8.29□□□□□ -1.08
USP3-213ENST00000559711 XAGE1AQ9HD64 81 aa8.29□□□□□ -1.08
USP3-213ENST00000559711 LST1O00453 97 aa8.28□□□□□ -1.08
USP3-213ENST00000559711 TMEM126AQ9H061 195 aa8.28□□□□□ -1.08
USP3-213ENST00000559711 TRBV10-2A0A0K0K1G8 114 aa8.27□□□□□ -1.08
USP3-213ENST00000559711 LECT2O14960 151 aa8.27□□□□□ -1.08
USP3-213ENST00000559711 Q6ZRP5 223 aa8.27□□□□□ -1.08
USP3-213ENST00000559711 CLEC2BQ92478 149 aa8.27□□□□□ -1.08
USP3-213ENST00000559711 SMCPP49901 116 aaPredicted RBP8.27□□□□□ -1.09
USP3-213ENST00000559711 LINC01620Q4KN68 170 aa8.27□□□□□ -1.09
USP3-213ENST00000559711 NCR3O14931 201 aa8.26□□□□□ -1.09
USP3-213ENST00000559711 PSCAO43653 123 aa8.26□□□□□ -1.09
USP3-213ENST00000559711 MTURNQ8N3F0 131 aa8.26□□□□□ -1.09
USP3-213ENST00000559711 VPREB1P12018 145 aa8.25□□□□□ -1.09
USP3-213ENST00000559711 GAGE2EQ4V326 116 aa8.25□□□□□ -1.09
USP3-213ENST00000559711 GAGE2DQ9UEU5 116 aa8.25□□□□□ -1.09
USP3-213ENST00000559711 C9JAW5 83 aa8.24□□□□□ -1.09
USP3-213ENST00000559711 H0YGX0 51 aa8.24□□□□□ -1.09
USP3-213ENST00000559711 M0QXV9 152 aa8.24□□□□□ -1.09
USP3-213ENST00000559711 IGLV6-57P01721 117 aa8.24□□□□□ -1.09
USP3-213ENST00000559711 LINC01600Q96MT4 127 aa8.24□□□□□ -1.09
USP3-213ENST00000559711 CNBPP62633 177 aaKnown RBP8.24□□□□□ -1.09
USP3-213ENST00000559711 S100A7L2Q5SY68 101 aa8.24□□□□□ -1.09
USP3-213ENST00000559711 C9orf129Q5T035 196 aaKnown RBP8.24□□□□□ -1.09
USP3-213ENST00000559711 Q6ZRN7 208 aaPredicted RBP8.24□□□□□ -1.09
USP3-213ENST00000559711 DNAH10Q8IVF4 4471 aa8.23□□□□□ -1.09
USP3-213ENST00000559711 SLC25A20O43772 301 aa8.23□□□□□ -1.09
USP3-213ENST00000559711 TRACP01848 142 aa8.23□□□□□ -1.09
USP3-213ENST00000559711 RPL18AQ02543 176 aaKnown RBP8.23□□□□□ -1.09
USP3-213ENST00000559711 C14orf177Q52M58 125 aa8.23□□□□□ -1.09
USP3-213ENST00000559711 WWC2-AS2Q96NR7 200 aa8.23□□□□□ -1.09
USP3-213ENST00000559711 TGP01266 2768 aa8.22□□□□□ -1.09
USP3-213ENST00000559711 FAM218AQ96MZ4 157 aa8.22□□□□□ -1.09
USP3-213ENST00000559711 LRCOL1A6NCL2 159 aa8.21□□□□□ -1.09
USP3-213ENST00000559711 M0R378 163 aa8.21□□□□□ -1.09
USP3-213ENST00000559711 ETDBQ3ZM63 59 aa8.21□□□□□ -1.09
USP3-213ENST00000559711 OCIAD2Q56VL3 154 aa8.21□□□□□ -1.09
USP3-213ENST00000559711 PLA2G2DQ9UNK4 145 aa8.21□□□□□ -1.09
USP3-213ENST00000559711 Q6ZR54 194 aa8.21□□□□□ -1.1
USP3-213ENST00000559711 ANKRD29Q8N6D5 301 aa8.21□□□□□ -1.1
USP3-213ENST00000559711 LOC107984640A0A0U1RRK4 108 aa8.2□□□□□ -1.1
USP3-213ENST00000559711 TRBV10-3A0A0K0K1G6 114 aa8.19□□□□□ -1.1
USP3-213ENST00000559711 H3BT86 120 aa8.19□□□□□ -1.1
USP3-213ENST00000559711 M0R2N4 97 aa8.19□□□□□ -1.1
USP3-213ENST00000559711 A0A087WYN8 130 aa8.18□□□□□ -1.1
USP3-213ENST00000559711 C6orf99Q4VX62 202 aa8.18□□□□□ -1.1
USP3-213ENST00000559711 TEN1Q86WV5 123 aa8.18□□□□□ -1.1
USP3-213ENST00000559711 IGLV5-37A0A075B6J1 123 aa8.17□□□□□ -1.1
USP3-213ENST00000559711 A0A1B0GX51 115 aa8.17□□□□□ -1.1
USP3-213ENST00000559711 K7ERU9 68 aa8.17□□□□□ -1.1
USP3-213ENST00000559711 GAGE2BQ13066 116 aa8.17□□□□□ -1.1
USP3-213ENST00000559711 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
USP3-213ENST00000559711 TRAV23DV6A0A075B6W5 121 aa8.16□□□□□ -1.1
USP3-213ENST00000559711 CBY1Q9Y3M2 126 aa8.16□□□□□ -1.1
USP3-213ENST00000559711 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.1
USP3-213ENST00000559711 C16orf90A8MZG2 172 aa8.14□□□□□ -1.11
USP3-213ENST00000559711 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.14□□□□□ -1.11
USP3-213ENST00000559711 TRBV7-6A0A0J9YX20 115 aa8.14□□□□□ -1.11
USP3-213ENST00000559711 C3orf84H3BNL1 204 aa8.14□□□□□ -1.11
USP3-213ENST00000559711 ZNF73O43830 326 aaPredicted RBP8.14□□□□□ -1.11
USP3-213ENST00000559711 KRTAP7-1Q8IUC3 87 aa8.14□□□□□ -1.11
USP3-213ENST00000559711 C9orf163Q8N9P6 203 aa8.14□□□□□ -1.11
USP3-213ENST00000559711 FAM168BA1KXE4 195 aa8.13□□□□□ -1.11
USP3-213ENST00000559711 DNAL4O96015 105 aa8.13□□□□□ -1.11
USP3-213ENST00000559711 BAALC-AS2P0C853 105 aa8.13□□□□□ -1.11
USP3-213ENST00000559711 LINC00575Q6W349 94 aa8.13□□□□□ -1.11
USP3-213ENST00000559711 C7orf33Q8WU49 177 aa8.13□□□□□ -1.11
USP3-213ENST00000559711 PPDPFLQ8WWR9 84 aa8.13□□□□□ -1.11
USP3-213ENST00000559711 LINC00476Q8WZB0 136 aa8.13□□□□□ -1.11
USP3-213ENST00000559711 DIRC1Q969H9 104 aa8.13□□□□□ -1.11
USP3-213ENST00000559711 LINC00167Q96N53 147 aa8.13□□□□□ -1.11
USP3-213ENST00000559711 LY6G6CO95867 125 aa8.12□□□□□ -1.11
USP3-213ENST00000559711 Q8N814 137 aa8.12□□□□□ -1.11
USP3-213ENST00000559711 KCNQ1DNQ9H478 68 aa8.12□□□□□ -1.11
USP3-213ENST00000559711 A0A087WTM6 91 aa8.11□□□□□ -1.11
USP3-213ENST00000559711 A0A096LNI7 61 aa8.11□□□□□ -1.11
USP3-213ENST00000559711 C22orf24Q9Y442 160 aa8.11□□□□□ -1.11
USP3-213ENST00000559711 J3QR89 54 aa8.11□□□□□ -1.11
USP3-213ENST00000559711 SNCGO76070 127 aa8.11□□□□□ -1.11
USP3-213ENST00000559711 PKIGQ9Y2B9 76 aa8.11□□□□□ -1.11
USP3-213ENST00000559711 DNAH2Q9P225 4427 aa8.11□□□□□ -1.11
USP3-213ENST00000559711 KMT2AQ03164 3969 aa8.11□□□□□ -1.11
USP3-213ENST00000559711 ELOF1P60002 83 aaKnown RBP8.1□□□□□ -1.11
USP3-213ENST00000559711 C1orf134Q5TEV5 83 aa8.1□□□□□ -1.11
USP3-213ENST00000559711 COX7BP24311 80 aa8.09□□□□□ -1.11
USP3-213ENST00000559711 SDIM1Q6ZPB5 146 aa8.09□□□□□ -1.11
USP3-213ENST00000559711 IGLV1-50A0A075B6I6 118 aa8.08□□□□□ -1.12
USP3-213ENST00000559711 TEX49A0A1B0GTD5 131 aa8.08□□□□□ -1.12
USP3-213ENST00000559711 hADV29S1A0JD25 119 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms