RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 CDC34P49427 236 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-223ENST00000553686 NDUFA6P56556 154 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 HIST1H2BDP58876 126 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 HIST1H2BCP62807 126 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 JOSD1Q15040 202 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-223ENST00000553686 HIST2H2BEQ16778 126 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 COX19Q49B96 90 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-223ENST00000553686 C5orf38Q86SI9 138 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 Q86TA4 180 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 HIST3H2BBQ8N257 126 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 LINC00469Q8N7U9 141 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 PACRGQ96M98 296 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-223ENST00000553686 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 MAP1LC3BQ9GZQ8 125 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 CDC42SE2Q9NRR3 84 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 GNG13Q9P2W3 67 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 A0A1W2PRE2 83 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 NDUFC2-KCTD14E9PQ53 114 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 TRGC2P03986 189 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 TRGC1P0CF51 173 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 GCHFRP30047 84 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 AKR1C3P42330 323 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 UBE2G1P62253 170 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 PYY3Q5JQD4 70 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 UNQ6190/PRO20217Q6UXQ8 127 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 SMIM7Q9BQ49 75 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 TP73-AS1Q9UF72 201 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 MUC12Q9UKN1 5478 aa3.1□□□□□ -1.91
ATXN3-223ENST00000553686 FLGP20930 4061 aaPredicted RBP3.09□□□□□ -1.91
ATXN3-223ENST00000553686 TGIF2-C20orf24A0A0A6YYL0 155 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 A0A1B0GV50 99 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 PEX7O00628 323 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 SLC25A20O43772 301 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 SERF1AO75920 110 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 STAG3L2P0CL84 134 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 STAG3L3P0CL85 134 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 RPL23P62829 140 aaKnown RBP3.09□□□□□ -1.91
ATXN3-223ENST00000553686 ZNF726P1Q15940 193 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 LYZL1Q6UWQ5 148 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 MRPL55Q7Z7F7 128 aaKnown RBP3.09□□□□□ -1.91
ATXN3-223ENST00000553686 C3orf22Q8N5N4 141 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 ORAOV1Q8WV07 137 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 FMC1Q96HJ9 113 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 HIST1H2BLQ99880 126 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 C2orf88Q9BSF0 95 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 C6orf48Q9UBA6 75 aa3.09□□□□□ -1.91
ATXN3-223ENST00000553686 TRBV30A0A0K0K1B3 111 aa3.08□□□□□ -1.92
ATXN3-223ENST00000553686 CXorf1O96002 111 aa3.08□□□□□ -1.92
ATXN3-223ENST00000553686 PMCHP20382 165 aa3.08□□□□□ -1.92
ATXN3-223ENST00000553686 DDTP30046 118 aa3.08□□□□□ -1.92
ATXN3-223ENST00000553686 CEBPGP53567 150 aa3.08□□□□□ -1.92
ATXN3-223ENST00000553686 SMAGPQ0VAQ4 97 aa3.08□□□□□ -1.92
ATXN3-223ENST00000553686 ADIRFQ15847 76 aa3.08□□□□□ -1.92
ATXN3-223ENST00000553686 MRAP2Q96G30 205 aa3.08□□□□□ -1.92
ATXN3-223ENST00000553686 TRAV13-1A0A0B4J241 112 aa3.07□□□□□ -1.92
ATXN3-223ENST00000553686 XKRY2A2RUG3 117 aa3.07□□□□□ -1.92
ATXN3-223ENST00000553686 FABP4P15090 132 aa3.07□□□□□ -1.92
ATXN3-223ENST00000553686 RPS29P62273 56 aaKnown RBP3.07□□□□□ -1.92
ATXN3-223ENST00000553686 LINC01551Q86U37 167 aa3.07□□□□□ -1.92
ATXN3-223ENST00000553686 KRTAP13-1Q8IUC0 172 aa3.07□□□□□ -1.92
ATXN3-223ENST00000553686 C14orf144Q96I85 54 aa3.07□□□□□ -1.92
ATXN3-223ENST00000553686 KMT2DO14686 5537 aa3.07□□□□□ -1.92
ATXN3-223ENST00000553686 I3L3M4 83 aa3.06□□□□□ -1.92
ATXN3-223ENST00000553686 LTAP01374 205 aa3.06□□□□□ -1.92
ATXN3-223ENST00000553686 RAB4AP20338 218 aa3.06□□□□□ -1.92
ATXN3-223ENST00000553686 UBE2G2P60604 165 aa3.06□□□□□ -1.92
ATXN3-223ENST00000553686 RPS20P60866 119 aaKnown RBP3.06□□□□□ -1.92
ATXN3-223ENST00000553686 Q6Q795 121 aa3.06□□□□□ -1.92
ATXN3-223ENST00000553686 PLEKHB2Q96CS7 222 aa3.06□□□□□ -1.92
ATXN3-223ENST00000553686 SMIM12Q96EX1 92 aa3.06□□□□□ -1.92
ATXN3-223ENST00000553686 TPPP3Q9BW30 176 aa3.06□□□□□ -1.92
ATXN3-223ENST00000553686 GNB1LQ9BYB4 327 aa3.06□□□□□ -1.92
ATXN3-223ENST00000553686 TRAPPC1Q9Y5R8 145 aa3.06□□□□□ -1.92
ATXN3-223ENST00000553686 SDHAF1A6NFY7 115 aa3.05□□□□□ -1.92
ATXN3-223ENST00000553686 F2Z2F3 143 aa3.05□□□□□ -1.92
ATXN3-223ENST00000553686 M0R143 59 aa3.05□□□□□ -1.92
ATXN3-223ENST00000553686 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
ATXN3-223ENST00000553686 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
ATXN3-223ENST00000553686 OSTCQ9NRP0 149 aa3.05□□□□□ -1.92
ATXN3-223ENST00000553686 CSDC2Q9Y534 153 aaKnown RBP3.05□□□□□ -1.92
ATXN3-223ENST00000553686 C20orf202A1L168 122 aa3.04□□□□□ -1.92
ATXN3-223ENST00000553686 FAM231DQ6ZW35 169 aa3.04□□□□□ -1.92
ATXN3-223ENST00000553686 GATD1Q8NB37 220 aa3.04□□□□□ -1.92
ATXN3-223ENST00000553686 GNG4P50150 75 aa3.03□□□□□ -1.92
ATXN3-223ENST00000553686 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
ATXN3-223ENST00000553686 TEX43Q6ZNM6 134 aa3.03□□□□□ -1.92
ATXN3-223ENST00000553686 GEMIN7Q9H840 131 aaKnown RBP3.03□□□□□ -1.92
ATXN3-223ENST00000553686 XAGE1AQ9HD64 81 aa3.03□□□□□ -1.92
ATXN3-223ENST00000553686 IGHV3OR16-9A0A0B4J2B5 98 aa3.02□□□□□ -1.93
ATXN3-223ENST00000553686 SMIM27A0A1W2PRY6 76 aa3.02□□□□□ -1.93
ATXN3-223ENST00000553686 TCAPO15273 167 aa3.02□□□□□ -1.93
ATXN3-223ENST00000553686 LINC00614P0C842 121 aa3.02□□□□□ -1.93
ATXN3-223ENST00000553686 FOXA3P55318 350 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-223ENST00000553686 RPL32P62910 135 aaKnown RBP3.02□□□□□ -1.93
ATXN3-223ENST00000553686 PMCHL1Q16048 86 aa3.02□□□□□ -1.93
ATXN3-223ENST00000553686 PDZD11Q5EBL8 140 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms