RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 STAB1Q9NY15 2570 aa5.94□□□□□ -1.46
HTT-208ENST00000510626 CR1P17927 2039 aa5.94□□□□□ -1.46
HTT-208ENST00000510626 KIF25-AS1Q9Y6Z4 181 aa5.94□□□□□ -1.46
HTT-208ENST00000510626 FHL2Q14192 279 aa5.94□□□□□ -1.46
HTT-208ENST00000510626 MOBPQ13875 183 aa5.94□□□□□ -1.46
HTT-208ENST00000510626 TRAV22A0A0B4J277 110 aa5.93□□□□□ -1.46
HTT-208ENST00000510626 A0A1B0GU69 56 aa5.93□□□□□ -1.46
HTT-208ENST00000510626 Q6ZTC4 211 aa5.93□□□□□ -1.46
HTT-208ENST00000510626 GVQW2A0A096LPI5 108 aaPredicted RBP5.93□□□□□ -1.46
HTT-208ENST00000510626 NBEAL1Q6ZS30 2694 aa5.92□□□□□ -1.46
HTT-208ENST00000510626 IGHV6-1A0A0B4J1U7 121 aa5.92□□□□□ -1.46
HTT-208ENST00000510626 IGHV3OR16-9A0A0B4J2B5 98 aa5.92□□□□□ -1.46
HTT-208ENST00000510626 FAM19A4Q96LR4 140 aa5.91□□□□□ -1.46
HTT-208ENST00000510626 LY6G6DO95868 133 aa5.91□□□□□ -1.46
HTT-208ENST00000510626 ASB16-AS1Q495Z4 193 aa5.91□□□□□ -1.46
HTT-208ENST00000510626 NUPR2A6NF83 97 aa5.91□□□□□ -1.46
HTT-208ENST00000510626 C6orf223Q8N319 242 aa5.91□□□□□ -1.46
HTT-208ENST00000510626 IGLV1-51P01701 117 aa5.9□□□□□ -1.46
HTT-208ENST00000510626 Q8NBF4 154 aa5.9□□□□□ -1.46
HTT-208ENST00000510626 PLA2G5P39877 138 aa5.9□□□□□ -1.47
HTT-208ENST00000510626 NANOS2P60321 138 aaKnown RBP5.89□□□□□ -1.47
HTT-208ENST00000510626 A0A0J9YWU9 116 aa5.89□□□□□ -1.47
HTT-208ENST00000510626 NOTCH1P46531 2555 aa5.89□□□□□ -1.47
HTT-208ENST00000510626 UQCR11O14957 56 aa5.89□□□□□ -1.47
HTT-208ENST00000510626 C16orf95Q9H693 158 aa5.89□□□□□ -1.47
HTT-208ENST00000510626 ODF3L2Q3SX64 289 aa5.88□□□□□ -1.47
HTT-208ENST00000510626 IGLV4-60A0A075B6I1 120 aa5.88□□□□□ -1.47
HTT-208ENST00000510626 A0A096LNI7 61 aa5.88□□□□□ -1.47
HTT-208ENST00000510626 A0A087WSZ3 146 aa5.88□□□□□ -1.47
HTT-208ENST00000510626 IGLV9-49A0A0B4J1Y8 123 aa5.88□□□□□ -1.47
HTT-208ENST00000510626 C6orf48Q9UBA6 75 aa5.88□□□□□ -1.47
HTT-208ENST00000510626 SMIM29Q86T20 159 aa5.88□□□□□ -1.47
HTT-208ENST00000510626 LRCOL1A6NCL2 159 aa5.88□□□□□ -1.47
HTT-208ENST00000510626 IGHV4-30-4P0DP06 118 aa5.87□□□□□ -1.47
HTT-208ENST00000510626 C9orf116Q5BN46 136 aaPredicted RBP5.87□□□□□ -1.47
HTT-208ENST00000510626 SPINK6Q6UWN8 80 aa5.87□□□□□ -1.47
HTT-208ENST00000510626 SRCAPQ6ZRS2 3230 aa5.87□□□□□ -1.47
HTT-208ENST00000510626 LYPD5Q6UWN5 251 aa5.87□□□□□ -1.47
HTT-208ENST00000510626 EDN2P20800 178 aa5.87□□□□□ -1.47
HTT-208ENST00000510626 PCOTHQ58A44 107 aa5.86□□□□□ -1.47
HTT-208ENST00000510626 LINC01006Q8NI28 216 aa5.86□□□□□ -1.47
HTT-208ENST00000510626 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
HTT-208ENST00000510626 H7BZZ5 65 aa5.85□□□□□ -1.47
HTT-208ENST00000510626 Q6ZRX8 168 aa5.85□□□□□ -1.47
HTT-208ENST00000510626 LINC00315P59091 139 aa5.85□□□□□ -1.47
HTT-208ENST00000510626 IGLV6-57P01721 117 aa5.85□□□□□ -1.47
HTT-208ENST00000510626 LCA10Q71F78 164 aa5.84□□□□□ -1.47
HTT-208ENST00000510626 LINC01556Q5JQF7 62 aa5.84□□□□□ -1.47
HTT-208ENST00000510626 PRR3P79522 188 aaKnown RBP5.83□□□□□ -1.48
HTT-208ENST00000510626 OBSCN-AS1Q96MR7 158 aa5.83□□□□□ -1.48
HTT-208ENST00000510626 TM2D3Q9BRN9 247 aa5.83□□□□□ -1.48
HTT-208ENST00000510626 EP400Q96L91 3159 aa5.83□□□□□ -1.48
HTT-208ENST00000510626 CHD6Q8TD26 2715 aa5.83□□□□□ -1.48
HTT-208ENST00000510626 Q6ZSN1 163 aa5.82□□□□□ -1.48
HTT-208ENST00000510626 LITAFQ99732 161 aa5.82□□□□□ -1.48
HTT-208ENST00000510626 A8MWP4 228 aa5.82□□□□□ -1.48
HTT-208ENST00000510626 Q6ZRU5 148 aa5.82□□□□□ -1.48
HTT-208ENST00000510626 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.82□□□□□ -1.48
HTT-208ENST00000510626 FAM218AQ96MZ4 157 aa5.82□□□□□ -1.48
HTT-208ENST00000510626 FAM229AH3BQW9 127 aa5.81□□□□□ -1.48
HTT-208ENST00000510626 CIRBP-AS1Q8TBR5 109 aa5.81□□□□□ -1.48
HTT-208ENST00000510626 A0A0C4DFX4 3053 aa5.81□□□□□ -1.48
HTT-208ENST00000510626 KIAA0087Q14695 138 aa5.81□□□□□ -1.48
HTT-208ENST00000510626 LINC00167Q96N53 147 aa5.81□□□□□ -1.48
HTT-208ENST00000510626 DMBT1Q9UGM3 2413 aaPredicted RBP5.8□□□□□ -1.48
HTT-208ENST00000510626 AVPP01185 164 aa5.8□□□□□ -1.48
HTT-208ENST00000510626 FLNAP21333 2647 aaKnown RBP5.79□□□□□ -1.48
HTT-208ENST00000510626 C10orf99Q6UWK7 81 aa5.79□□□□□ -1.48
HTT-208ENST00000510626 IGLV5-52A0A0A0MRZ9 124 aa5.79□□□□□ -1.48
HTT-208ENST00000510626 FHL3Q13643 280 aa5.79□□□□□ -1.48
HTT-208ENST00000510626 C22orf24Q9Y442 160 aa5.78□□□□□ -1.48
HTT-208ENST00000510626 EIF4EBP3O60516 100 aaPredicted RBP5.78□□□□□ -1.48
HTT-208ENST00000510626 LINC00336Q6ZUF6 198 aa5.78□□□□□ -1.48
HTT-208ENST00000510626 A0A087X002 238 aa5.78□□□□□ -1.48
HTT-208ENST00000510626 SMCR5Q8TEV8 140 aa5.78□□□□□ -1.48
HTT-208ENST00000510626 Q6ZRP5 223 aa5.77□□□□□ -1.49
HTT-208ENST00000510626 MDFIQ99750 246 aa5.76□□□□□ -1.49
HTT-208ENST00000510626 HELZ2Q9BYK8 2649 aaKnown RBP5.76□□□□□ -1.49
HTT-208ENST00000510626 CFAP46Q8IYW2 2715 aa5.76□□□□□ -1.49
HTT-208ENST00000510626 A8MUN3 132 aa5.76□□□□□ -1.49
HTT-208ENST00000510626 ITPR3Q14573 2671 aa5.75□□□□□ -1.49
HTT-208ENST00000510626 COA5Q86WW8 74 aa5.75□□□□□ -1.49
HTT-208ENST00000510626 COL6A5A8TX70 2615 aa5.75□□□□□ -1.49
HTT-208ENST00000510626 C19orf84I3L1E1 186 aa5.75□□□□□ -1.49
HTT-208ENST00000510626 FSHBP01225 129 aa5.75□□□□□ -1.49
HTT-208ENST00000510626 KCNQ1DNQ9H478 68 aa5.74□□□□□ -1.49
HTT-208ENST00000510626 A8MTW9 85 aa5.74□□□□□ -1.49
HTT-208ENST00000510626 C16orf90A8MZG2 172 aa5.74□□□□□ -1.49
HTT-208ENST00000510626 BAHCC1Q9P281 2608 aa5.73□□□□□ -1.49
HTT-208ENST00000510626 C18orf65Q6ZTR6 163 aa5.73□□□□□ -1.49
HTT-208ENST00000510626 Q75L30 129 aa5.73□□□□□ -1.49
HTT-208ENST00000510626 SPINK1P00995 79 aa5.73□□□□□ -1.49
HTT-208ENST00000510626 LINC00476Q8WZB0 136 aa5.73□□□□□ -1.49
HTT-208ENST00000510626 DNAH12Q6ZR08 3092 aa5.73□□□□□ -1.49
HTT-208ENST00000510626 PRLHP81277 87 aa5.72□□□□□ -1.49
HTT-208ENST00000510626 UNC79Q9P2D8 2635 aa5.72□□□□□ -1.49
HTT-208ENST00000510626 IGKV2D-30A0A075B6S6 120 aa5.72□□□□□ -1.49
HTT-208ENST00000510626 IGKV2-30P06310 120 aa5.72□□□□□ -1.49
HTT-208ENST00000510626 PLA2G2DQ9UNK4 145 aa5.72□□□□□ -1.49
HTT-208ENST00000510626 STAB2Q8WWQ8 2551 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms