RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SSSCA1O60232 199 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 SPINK4O60575 86 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 TNP1P09430 55 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 HIST1H1DP16402 221 aaKnown RBP-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 SPRR1BP22528 89 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 DEFB136Q30KP8 78 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 Q6JHZ5 121 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 BAGE2Q86Y30 109 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 DEFB123Q8N688 67 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 PP6455Q8WZ26 134 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 SNRNP25Q9BV90 132 aaKnown RBP-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 SERP1Q9Y6X1 66 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 SMARCA2P51531 1590 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 ALKQ9UM73 1620 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 MYH4Q9Y623 1939 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 PRDM2Q13029 1718 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 NAIPQ13075 1403 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 ARHGAP35Q9NRY4 1499 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 WDR7Q9Y4E6 1490 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 PSME4Q14997 1843 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 SLIT1O75093 1534 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 MMP24-AS1A0A0U1RRL7 71 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 LOC285095A0A1B0GVY8 99 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 CPSF4LA6NMK7 179 aaKnown RBP-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 F8VRH5 84 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 H3BSH0 61 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 I3L2K1 104 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 APELAP0DMC3 54 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 COX6B1P14854 86 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 HTN1P15515 57 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 FGF7P21781 194 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 UBE2D3P61077 147 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 UBE2D2P62837 147 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 SELENOWP63302 87 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 C9orf62Q8N4C0 152 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 Q8N8P6 123 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 FDCSPQ8NFU4 85 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 ARL11Q969Q4 196 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 PPP3R2Q96LZ3 170 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 MGST2Q99735 147 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 MRPL34Q9BQ48 92 aaKnown RBP-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 DYNLRB1Q9NP97 96 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 UBE2D4Q9Y2X8 147 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 CDC42BPAQ5VT25 1732 aa-0.22□□□□□ -2.44
HMGB1P29-201ENST00000505659 RGPD3A6NKT7 1758 aaPredicted RBP-0.22□□□□□ -2.45
HMGB1P29-201ENST00000505659 RGPD8O14715 1765 aaPredicted RBP-0.22□□□□□ -2.45
HMGB1P29-201ENST00000505659 RGPD5Q99666 1765 aa-0.22□□□□□ -2.45
HMGB1P29-201ENST00000505659 NCOA3Q9Y6Q9 1424 aa-0.22□□□□□ -2.45
HMGB1P29-201ENST00000505659 ATP10BO94823 1461 aa-0.22□□□□□ -2.45
HMGB1P29-201ENST00000505659 SHANK2Q9UPX8 1470 aa-0.22□□□□□ -2.45
HMGB1P29-201ENST00000505659 MYH6P13533 1939 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 MYH8P13535 1937 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 TCHHQ07283 1943 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 CRYBG1Q9Y4K1 1723 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 BCORQ6W2J9 1755 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 A0A096LPF7 62 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 LOC105371267A0A1B0GV96 52 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 CCL22O00626 93 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 DEFB130BP0DP73 79 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 DEFB130AP0DP74 79 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 HTN3P15516 51 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 CD52P31358 61 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 LINC01556Q5JQF7 62 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 HEPN1Q6WQI6 88 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 COMMD6Q7Z4G1 85 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 C5orf38Q86SI9 138 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 WFDC13Q8IUB5 93 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 LEAP2Q969E1 77 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 NDUFA4L2Q9NRX3 87 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 SBF2Q86WG5 1849 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 WNK3Q9BYP7 1800 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 SPEF2Q9C093 1822 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 ANKRD50Q9ULJ7 1429 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 C1orf167Q5SNV9 1468 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 MAGI2Q86UL8 1455 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 MAGI1Q96QZ7 1491 aaPredicted RBP-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 PRDM15P57071 1507 aaPredicted RBP-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 TULP4Q9NRJ4 1543 aa-0.23□□□□□ -2.45
HMGB1P29-201ENST00000505659 CICQ96RK0 1608 aaPredicted RBP-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 ARAP2Q8WZ64 1704 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 RGPD2P0DJD1 1756 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 RGPD4Q7Z3J3 1758 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 PATJQ8NI35 1801 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 TRBV7-3A0A075B6L6 115 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 TRAV30A0A087WSZ9 112 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 DEFB131BA0A096LNP1 70 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 LINC01546A6NGU7 62 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 FAM223BA6NKX1 122 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 NDUFA3O95167 84 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 STATHP02808 62 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 MGPP08493 103 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 BTG2P78543 158 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 DEFB133Q30KQ1 61 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 CCDC58Q4VC31 144 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 Q56UQ5 140 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 MEIG1Q5JSS6 88 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 C6orf201Q7Z4U5 140 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 FAM223AQ8IWN6 122 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 C8orf59Q8N0T1 100 aaPredicted RBP-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 LSM10Q969L4 123 aaKnown RBP-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms