RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	HIST1H4G	Q99525	98 aa		11.75	□□□□□ -0.53
SRM-206	ENST00000490101	MYCBP2	O75592	4640 aa		11.74	□□□□□ -0.53
SRM-206	ENST00000490101	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.74	□□□□□ -0.53
SRM-206	ENST00000490101		A0A0U1RRA0	63 aa		11.74	□□□□□ -0.53
SRM-206	ENST00000490101	SMR3B	P02814	79 aa	Predicted RBP	11.74	□□□□□ -0.53
SRM-206	ENST00000490101	HAMP	P81172	84 aa		11.74	□□□□□ -0.53
SRM-206	ENST00000490101	PTTG1IP	P53801	180 aa		11.73	□□□□□ -0.53
SRM-206	ENST00000490101	MIR7-3HG	Q8N6C7	128 aa		11.73	□□□□□ -0.53
SRM-206	ENST00000490101	IGLV5-52	A0A0A0MRZ9	124 aa		11.72	□□□□□ -0.53
SRM-206	ENST00000490101	IFITM1	P13164	125 aa		11.72	□□□□□ -0.53
SRM-206	ENST00000490101	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.71	□□□□□ -0.53
SRM-206	ENST00000490101	TLX1NB	P0CAT3	122 aa		11.71	□□□□□ -0.53
SRM-206	ENST00000490101	DAND5	Q8N907	189 aa		11.71	□□□□□ -0.53
SRM-206	ENST00000490101	PPDPF	Q9H3Y8	114 aa		11.71	□□□□□ -0.53
SRM-206	ENST00000490101	NDUFC2-KCTD14	E9PQ53	114 aa		11.7	□□□□□ -0.54
SRM-206	ENST00000490101	LINC00308	Q8TCZ7	52 aa		11.7	□□□□□ -0.54
SRM-206	ENST00000490101	MUSTN1	Q8IVN3	82 aa		11.69	□□□□□ -0.54
SRM-206	ENST00000490101	CEND1	Q8N111	149 aa		11.69	□□□□□ -0.54
SRM-206	ENST00000490101	COPS9	Q8WXC6	57 aa		11.69	□□□□□ -0.54
SRM-206	ENST00000490101	DNAH8	Q96JB1	4490 aa		11.69	□□□□□ -0.54
SRM-206	ENST00000490101	FLG2	Q5D862	2391 aa	Predicted RBP	11.69	□□□□□ -0.54
SRM-206	ENST00000490101	LOC107984156	A0A0G2JMH3	177 aa		11.68	□□□□□ -0.54
SRM-206	ENST00000490101	ARL17A	Q8IVW1	177 aa		11.68	□□□□□ -0.54
SRM-206	ENST00000490101	C9orf163	Q8N9P6	203 aa		11.68	□□□□□ -0.54
SRM-206	ENST00000490101		M0R143	59 aa		11.67	□□□□□ -0.54
SRM-206	ENST00000490101	SOSTDC1	Q6X4U4	206 aa		11.67	□□□□□ -0.54
SRM-206	ENST00000490101	SND1-IT1	Q9HBX3	110 aa		11.67	□□□□□ -0.54
SRM-206	ENST00000490101	LOC107984640	A0A0U1RRK4	108 aa		11.66	□□□□□ -0.54
SRM-206	ENST00000490101	EIF4EBP3	O60516	100 aa	Predicted RBP	11.66	□□□□□ -0.54
SRM-206	ENST00000490101	HINT1	P49773	126 aa	Predicted RBP	11.66	□□□□□ -0.54
SRM-206	ENST00000490101	BVES-AS1	Q5T3Y7	98 aa		11.66	□□□□□ -0.54
SRM-206	ENST00000490101		Q6ZRP5	223 aa		11.66	□□□□□ -0.54
SRM-206	ENST00000490101	FAM229A	H3BQW9	127 aa		11.65	□□□□□ -0.54
SRM-206	ENST00000490101	NPC2	P61916	151 aa		11.65	□□□□□ -0.54
SRM-206	ENST00000490101	FXYD2	P54710	66 aa		11.64	□□□□□ -0.55
SRM-206	ENST00000490101	RPL24	P83731	157 aa	Known RBP	11.64	□□□□□ -0.55
SRM-206	ENST00000490101	PKIG	Q9Y2B9	76 aa		11.64	□□□□□ -0.55
SRM-206	ENST00000490101	RPL18A	Q02543	176 aa	Known RBP	11.62	□□□□□ -0.55
SRM-206	ENST00000490101	TMEM238L	A0A1B0GVL6	79 aa		11.61	□□□□□ -0.55
SRM-206	ENST00000490101		A4D1N5	150 aa		11.61	□□□□□ -0.55
SRM-206	ENST00000490101		A6NJY4	79 aa		11.61	□□□□□ -0.55
SRM-206	ENST00000490101	GAGE2E	Q4V326	116 aa		11.61	□□□□□ -0.55
SRM-206	ENST00000490101	SDIM1	Q6ZPB5	146 aa		11.61	□□□□□ -0.55
SRM-206	ENST00000490101	XAGE1A	Q9HD64	81 aa		11.61	□□□□□ -0.55
SRM-206	ENST00000490101	FAM30A	Q9NZY2	134 aa		11.61	□□□□□ -0.55
SRM-206	ENST00000490101	GAGE2D	Q9UEU5	116 aa		11.61	□□□□□ -0.55
SRM-206	ENST00000490101	SNHG12	Q9BXW3	62 aa		11.6	□□□□□ -0.55
SRM-206	ENST00000490101	NDUFC2	O95298	119 aa		11.58	□□□□□ -0.56
SRM-206	ENST00000490101	GAGE2B	Q13066	116 aa		11.58	□□□□□ -0.56
SRM-206	ENST00000490101	C9orf129	Q5T035	196 aa	Known RBP	11.58	□□□□□ -0.56
SRM-206	ENST00000490101		A0A1B0GWB2	263 aa		11.57	□□□□□ -0.56
SRM-206	ENST00000490101	BATF	Q16520	125 aa		11.57	□□□□□ -0.56
SRM-206	ENST00000490101	LINC01620	Q4KN68	170 aa		11.57	□□□□□ -0.56
SRM-206	ENST00000490101		A0A096LNI7	61 aa		11.56	□□□□□ -0.56
SRM-206	ENST00000490101	PLA2G2D	Q9UNK4	145 aa		11.56	□□□□□ -0.56
SRM-206	ENST00000490101		A6NDN8	102 aa		11.55	□□□□□ -0.56
SRM-206	ENST00000490101	CFC1B	P0CG36	223 aa		11.55	□□□□□ -0.56
SRM-206	ENST00000490101	CFC1	P0CG37	223 aa		11.55	□□□□□ -0.56
SRM-206	ENST00000490101		Q8NDZ9	215 aa		11.55	□□□□□ -0.56
SRM-206	ENST00000490101	NHP2	Q9NX24	153 aa	Known RBP	11.55	□□□□□ -0.56
SRM-206	ENST00000490101		A0A0B4J2C4	111 aa		11.54	□□□□□ -0.56
SRM-206	ENST00000490101	VPREB1	P12018	145 aa		11.53	□□□□□ -0.56
SRM-206	ENST00000490101	LINC00474	Q9P2X8	69 aa		11.53	□□□□□ -0.56
SRM-206	ENST00000490101	IGKV2-28	A0A075B6P5	120 aa		11.52	□□□□□ -0.57
SRM-206	ENST00000490101	IGKV2D-28	P01615	120 aa		11.52	□□□□□ -0.57
SRM-206	ENST00000490101	IGLV5-37	A0A075B6J1	123 aa		11.51	□□□□□ -0.57
SRM-206	ENST00000490101	IGKV2-24	A0A0C4DH68	120 aa		11.51	□□□□□ -0.57
SRM-206	ENST00000490101		J3QL48	77 aa		11.51	□□□□□ -0.57
SRM-206	ENST00000490101	LINC00528	Q8N1L1	170 aa		11.51	□□□□□ -0.57
SRM-206	ENST00000490101	TRBV10-2	A0A0K0K1G8	114 aa		11.5	□□□□□ -0.57
SRM-206	ENST00000490101	CHTF8	P0CG12	524 aa		11.5	□□□□□ -0.57
SRM-206	ENST00000490101	PRR3	P79522	188 aa	Known RBP	11.5	□□□□□ -0.57
SRM-206	ENST00000490101		Q6ZSA8	131 aa		11.5	□□□□□ -0.57
SRM-206	ENST00000490101	RAB37	Q96AX2	223 aa		11.5	□□□□□ -0.57
SRM-206	ENST00000490101	PRO1854	Q9UHT4	67 aa		11.5	□□□□□ -0.57
SRM-206	ENST00000490101	TRAV13-2	A0A0B4J235	113 aa		11.49	□□□□□ -0.57
SRM-206	ENST00000490101		K7ERJ3	54 aa		11.49	□□□□□ -0.57
SRM-206	ENST00000490101	PLA2G1B	P04054	148 aa	Known RBP	11.49	□□□□□ -0.57
SRM-206	ENST00000490101	COL5A1-AS1	Q5SY13	56 aa		11.49	□□□□□ -0.57
SRM-206	ENST00000490101	SERTAD4-AS1	Q5TG53	156 aa		11.49	□□□□□ -0.57
SRM-206	ENST00000490101	LINC00337	Q8N6G1	96 aa		11.49	□□□□□ -0.57
SRM-206	ENST00000490101	KRTAP7-1	Q8IUC3	87 aa		11.48	□□□□□ -0.57
SRM-206	ENST00000490101	FAM168B	A1KXE4	195 aa		11.47	□□□□□ -0.57
SRM-206	ENST00000490101	PANO1	I0J062	215 aa		11.47	□□□□□ -0.57
SRM-206	ENST00000490101		M0R378	163 aa		11.47	□□□□□ -0.57
SRM-206	ENST00000490101	SPACA4	Q8TDM5	124 aa		11.47	□□□□□ -0.57
SRM-206	ENST00000490101		A0A1W2PNN7	141 aa		11.46	□□□□□ -0.57
SRM-206	ENST00000490101	NCR3	O14931	201 aa		11.46	□□□□□ -0.57
SRM-206	ENST00000490101	SCX	Q7RTU7	201 aa		11.46	□□□□□ -0.57
SRM-206	ENST00000490101	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.46	□□□□□ -0.57
SRM-206	ENST00000490101	LBH	Q53QV2	105 aa	Predicted RBP	11.45	□□□□□ -0.58
SRM-206	ENST00000490101	NKAPP1	Q8N9T2	125 aa		11.45	□□□□□ -0.58
SRM-206	ENST00000490101	RPL13A	P40429	203 aa	Known RBP	11.44	□□□□□ -0.58
SRM-206	ENST00000490101	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.44	□□□□□ -0.58
SRM-206	ENST00000490101	TAX1BP3	O14907	124 aa		11.43	□□□□□ -0.58
SRM-206	ENST00000490101	IGLV6-57	P01721	117 aa		11.43	□□□□□ -0.58
SRM-206	ENST00000490101	OR13C6P	Q8NH95	151 aa		11.43	□□□□□ -0.58
SRM-206	ENST00000490101	TMEM126A	Q9H061	195 aa		11.43	□□□□□ -0.58
SRM-206	ENST00000490101	C22orf24	Q9Y442	160 aa		11.43	□□□□□ -0.58
SRM-206	ENST00000490101	DPH3	Q96FX2	82 aa		11.42	□□□□□ -0.58

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