RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 Q6ZVH6 145 aa11.9□□□□□ -0.5
ERCC2-205ENST00000485403 TLX1NBP0CAT3 122 aa11.89□□□□□ -0.51
ERCC2-205ENST00000485403 NPC2P61916 151 aa11.89□□□□□ -0.51
ERCC2-205ENST00000485403 C9orf163Q8N9P6 203 aa11.89□□□□□ -0.51
ERCC2-205ENST00000485403 LOC107984640A0A0U1RRK4 108 aa11.88□□□□□ -0.51
ERCC2-205ENST00000485403 RPL18AQ02543 176 aaKnown RBP11.88□□□□□ -0.51
ERCC2-205ENST00000485403 LINC01620Q4KN68 170 aa11.88□□□□□ -0.51
ERCC2-205ENST00000485403 GAGE2EQ4V326 116 aa11.88□□□□□ -0.51
ERCC2-205ENST00000485403 CEND1Q8N111 149 aa11.88□□□□□ -0.51
ERCC2-205ENST00000485403 GAGE2DQ9UEU5 116 aa11.88□□□□□ -0.51
ERCC2-205ENST00000485403 CDK2AP2O75956 126 aa11.87□□□□□ -0.51
ERCC2-205ENST00000485403 IFITM1P13164 125 aa11.87□□□□□ -0.51
ERCC2-205ENST00000485403 MUSTN1Q8IVN3 82 aa11.87□□□□□ -0.51
ERCC2-205ENST00000485403 LINC00308Q8TCZ7 52 aa11.87□□□□□ -0.51
ERCC2-205ENST00000485403 SND1-IT1Q9HBX3 110 aa11.87□□□□□ -0.51
ERCC2-205ENST00000485403 HERC2O95714 4834 aa11.87□□□□□ -0.51
ERCC2-205ENST00000485403 TAX1BP3O14907 124 aa11.86□□□□□ -0.51
ERCC2-205ENST00000485403 Q6ZRP5 223 aa11.86□□□□□ -0.51
ERCC2-205ENST00000485403 GAGE2BQ13066 116 aa11.86□□□□□ -0.51
ERCC2-205ENST00000485403 COPS9Q8WXC6 57 aa11.86□□□□□ -0.51
ERCC2-205ENST00000485403 PKIGQ9Y2B9 76 aa11.86□□□□□ -0.51
ERCC2-205ENST00000485403 PTTG1IPP53801 180 aa11.85□□□□□ -0.51
ERCC2-205ENST00000485403 SOSTDC1Q6X4U4 206 aa11.85□□□□□ -0.51
ERCC2-205ENST00000485403 Q6ZSA8 131 aa11.85□□□□□ -0.51
ERCC2-205ENST00000485403 XAGE1AQ9HD64 81 aa11.84□□□□□ -0.51
ERCC2-205ENST00000485403 EIF4EBP3O60516 100 aaPredicted RBP11.83□□□□□ -0.52
ERCC2-205ENST00000485403 FXYD2P54710 66 aa11.82□□□□□ -0.52
ERCC2-205ENST00000485403 RPL24P83731 157 aaKnown RBP11.82□□□□□ -0.52
ERCC2-205ENST00000485403 SDIM1Q6ZPB5 146 aa11.82□□□□□ -0.52
ERCC2-205ENST00000485403 FAM30AQ9NZY2 134 aa11.82□□□□□ -0.52
ERCC2-205ENST00000485403 LOC107984156A0A0G2JMH3 177 aa11.81□□□□□ -0.52
ERCC2-205ENST00000485403 XGP55808 180 aa11.81□□□□□ -0.52
ERCC2-205ENST00000485403 ARL17AQ8IVW1 177 aa11.81□□□□□ -0.52
ERCC2-205ENST00000485403 PPDPFQ9H3Y8 114 aa11.81□□□□□ -0.52
ERCC2-205ENST00000485403 A0A096LNI7 61 aa11.8□□□□□ -0.52
ERCC2-205ENST00000485403 C9orf129Q5T035 196 aaKnown RBP11.8□□□□□ -0.52
ERCC2-205ENST00000485403 IGKV2-24A0A0C4DH68 120 aa11.79□□□□□ -0.52
ERCC2-205ENST00000485403 TMEM238LA0A1B0GVL6 79 aa11.78□□□□□ -0.52
ERCC2-205ENST00000485403 A4D1N5 150 aa11.78□□□□□ -0.52
ERCC2-205ENST00000485403 A6NJY4 79 aa11.78□□□□□ -0.52
ERCC2-205ENST00000485403 FAT1Q14517 4588 aa11.77□□□□□ -0.52
ERCC2-205ENST00000485403 C9orf118A6NHY6 69 aa11.77□□□□□ -0.52
ERCC2-205ENST00000485403 NHP2Q9NX24 153 aaKnown RBP11.76□□□□□ -0.53
ERCC2-205ENST00000485403 A0A1B0GWB2 263 aa11.76□□□□□ -0.53
ERCC2-205ENST00000485403 CHTF8P0CG12 524 aa11.76□□□□□ -0.53
ERCC2-205ENST00000485403 VAMP3Q15836 100 aa11.75□□□□□ -0.53
ERCC2-205ENST00000485403 LINC00474Q9P2X8 69 aa11.75□□□□□ -0.53
ERCC2-205ENST00000485403 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.75□□□□□ -0.53
ERCC2-205ENST00000485403 PANO1I0J062 215 aa11.74□□□□□ -0.53
ERCC2-205ENST00000485403 Q8NDZ9 215 aa11.74□□□□□ -0.53
ERCC2-205ENST00000485403 NDUFC2O95298 119 aa11.73□□□□□ -0.53
ERCC2-205ENST00000485403 RAB37Q96AX2 223 aa11.73□□□□□ -0.53
ERCC2-205ENST00000485403 K7ERJ3 54 aa11.72□□□□□ -0.53
ERCC2-205ENST00000485403 HAMPP81172 84 aa11.72□□□□□ -0.53
ERCC2-205ENST00000485403 UBE2V1Q13404 147 aa11.72□□□□□ -0.53
ERCC2-205ENST00000485403 SCXQ7RTU7 201 aa11.72□□□□□ -0.53
ERCC2-205ENST00000485403 PLA2G2DQ9UNK4 145 aa11.72□□□□□ -0.53
ERCC2-205ENST00000485403 FAM168BA1KXE4 195 aa11.71□□□□□ -0.53
ERCC2-205ENST00000485403 VPREB1P12018 145 aa11.71□□□□□ -0.53
ERCC2-205ENST00000485403 PRR3P79522 188 aaKnown RBP11.71□□□□□ -0.53
ERCC2-205ENST00000485403 DPH3Q96FX2 82 aa11.71□□□□□ -0.53
ERCC2-205ENST00000485403 H3BUT2 72 aa11.7□□□□□ -0.54
ERCC2-205ENST00000485403 NCR3O14931 201 aa11.7□□□□□ -0.54
ERCC2-205ENST00000485403 CFC1BP0CG36 223 aa11.7□□□□□ -0.54
ERCC2-205ENST00000485403 CFC1P0CG37 223 aa11.7□□□□□ -0.54
ERCC2-205ENST00000485403 SERTAD4-AS1Q5TG53 156 aa11.7□□□□□ -0.54
ERCC2-205ENST00000485403 SPACA4Q8TDM5 124 aa11.7□□□□□ -0.54
ERCC2-205ENST00000485403 FAM19A5Q7Z5A7 132 aaPredicted RBP11.7□□□□□ -0.54
ERCC2-205ENST00000485403 CIRBP-AS1Q8TBR5 109 aa11.7□□□□□ -0.54
ERCC2-205ENST00000485403 IGKV2-28A0A075B6P5 120 aa11.69□□□□□ -0.54
ERCC2-205ENST00000485403 IGKV2D-28P01615 120 aa11.69□□□□□ -0.54
ERCC2-205ENST00000485403 NKAPP1Q8N9T2 125 aa11.69□□□□□ -0.54
ERCC2-205ENST00000485403 KRTAP17-1Q9BYP8 105 aa11.69□□□□□ -0.54
ERCC2-205ENST00000485403 A0A0B4J2C4 111 aa11.68□□□□□ -0.54
ERCC2-205ENST00000485403 A0A1W2PNN7 141 aa11.68□□□□□ -0.54
ERCC2-205ENST00000485403 A0A1W2PPM0 123 aa11.68□□□□□ -0.54
ERCC2-205ENST00000485403 IGLV5-37A0A075B6J1 123 aa11.67□□□□□ -0.54
ERCC2-205ENST00000485403 KRTAP7-1Q8IUC3 87 aa11.67□□□□□ -0.54
ERCC2-205ENST00000485403 TRAV13-2A0A0B4J235 113 aa11.66□□□□□ -0.54
ERCC2-205ENST00000485403 TRBV10-2A0A0K0K1G8 114 aa11.66□□□□□ -0.54
ERCC2-205ENST00000485403 FABP2P12104 132 aa11.66□□□□□ -0.54
ERCC2-205ENST00000485403 M0R378 163 aa11.65□□□□□ -0.54
ERCC2-205ENST00000485403 GTF2H5Q6ZYL4 71 aa11.65□□□□□ -0.54
ERCC2-205ENST00000485403 Q8N1X5 172 aa11.65□□□□□ -0.54
ERCC2-205ENST00000485403 LINC00337Q8N6G1 96 aa11.65□□□□□ -0.54
ERCC2-205ENST00000485403 OR13C6PQ8NH95 151 aa11.65□□□□□ -0.54
ERCC2-205ENST00000485403 C22orf24Q9Y442 160 aa11.65□□□□□ -0.54
ERCC2-205ENST00000485403 VPS13BQ7Z7G8 4022 aa11.65□□□□□ -0.55
ERCC2-205ENST00000485403 A0A087WYN8 130 aa11.64□□□□□ -0.55
ERCC2-205ENST00000485403 GAGE10A6NGK3 116 aa11.64□□□□□ -0.55
ERCC2-205ENST00000485403 NAA38Q9BRA0 125 aaKnown RBP11.64□□□□□ -0.55
ERCC2-205ENST00000485403 PRO1854Q9UHT4 67 aa11.64□□□□□ -0.55
ERCC2-205ENST00000485403 M0QXV9 152 aa11.63□□□□□ -0.55
ERCC2-205ENST00000485403 RPL13AP40429 203 aaKnown RBP11.63□□□□□ -0.55
ERCC2-205ENST00000485403 S100A7L2Q5SY68 101 aa11.63□□□□□ -0.55
ERCC2-205ENST00000485403 PLAC8Q9NZF1 115 aa11.63□□□□□ -0.55
ERCC2-205ENST00000485403 SMR3BP02814 79 aaPredicted RBP11.62□□□□□ -0.55
ERCC2-205ENST00000485403 C7orf33Q8WU49 177 aa11.62□□□□□ -0.55
ERCC2-205ENST00000485403 K7EP34 96 aa11.61□□□□□ -0.55
ERCC2-205ENST00000485403 MRPL55Q7Z7F7 128 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms