RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 QRFPP83859 136 aa0.47□□□□□ -2.33
VPS41-207ENST00000439468 FXYD3Q14802 87 aa0.47□□□□□ -2.33
VPS41-207ENST00000439468 OR51A4Q8NGJ6 313 aa0.47□□□□□ -2.33
VPS41-207ENST00000439468 ATP6V0E2Q8NHE4 81 aa0.47□□□□□ -2.33
VPS41-207ENST00000439468 BRK1Q8WUW1 75 aa0.47□□□□□ -2.33
VPS41-207ENST00000439468 RHPN1-AS1Q9BWJ2 59 aa0.47□□□□□ -2.33
VPS41-207ENST00000439468 METTL1Q9UBP6 276 aaKnown RBP0.47□□□□□ -2.33
VPS41-207ENST00000439468 HLA-DRB4X5D2U9 266 aa0.47□□□□□ -2.33
VPS41-207ENST00000439468 LOC107986453A0A1B0GWG9 222 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 TMEM14DPA8MWL7 114 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 H3BMG7 143 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 HMGN4O00479 90 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 CDC42EP2O14613 210 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 PFDN1O60925 122 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 GYPBP06028 91 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 SLC25A4P12235 298 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 COPZ1P61923 177 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 KLK9Q2XQG4 91 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 SAMD13Q5VXD3 122 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 TSKUQ8WUA8 353 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 PLAC4Q8WY50 150 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 CIB3Q96Q77 187 aaPredicted RBP0.46□□□□□ -2.34
VPS41-207ENST00000439468 NOP10Q9NPE3 64 aaKnown RBP0.46□□□□□ -2.34
VPS41-207ENST00000439468 MPC1Q9Y5U8 109 aa0.46□□□□□ -2.34
VPS41-207ENST00000439468 A0A096LNI7 61 aa0.45□□□□□ -2.34
VPS41-207ENST00000439468 TRBV7-6A0A0J9YX20 115 aa0.45□□□□□ -2.34
VPS41-207ENST00000439468 A8MTW9 85 aa0.45□□□□□ -2.34
VPS41-207ENST00000439468 NDUFA4O00483 81 aa0.45□□□□□ -2.34
VPS41-207ENST00000439468 EDF1O60869 148 aaKnown RBP0.45□□□□□ -2.34
VPS41-207ENST00000439468 DBIP07108 87 aaKnown RBP0.45□□□□□ -2.34
VPS41-207ENST00000439468 SAA1P0DJI8 122 aaPredicted RBP0.45□□□□□ -2.34
VPS41-207ENST00000439468 RPS27P42677 84 aaKnown RBP0.45□□□□□ -2.34
VPS41-207ENST00000439468 SNRPD3P62318 126 aaKnown RBP0.45□□□□□ -2.34
VPS41-207ENST00000439468 PLGLAQ15195 96 aa0.45□□□□□ -2.34
VPS41-207ENST00000439468 KRTAP19-8Q3LI54 63 aa0.45□□□□□ -2.34
VPS41-207ENST00000439468 TMEM128Q5BJH2 165 aa0.45□□□□□ -2.34
VPS41-207ENST00000439468 PSMG4Q5JS54 123 aa0.45□□□□□ -2.34
VPS41-207ENST00000439468 TTC9CQ8N5M4 171 aa0.45□□□□□ -2.34
VPS41-207ENST00000439468 VSTM2AQ8TAG5 236 aa0.45□□□□□ -2.34
VPS41-207ENST00000439468 AP1S3Q96PC3 154 aa0.45□□□□□ -2.34
VPS41-207ENST00000439468 DPY30Q9C005 99 aa0.45□□□□□ -2.34
VPS41-207ENST00000439468 TIMM8BQ9Y5J9 83 aaPredicted RBP0.45□□□□□ -2.34
VPS41-207ENST00000439468 BBIP1A8MTZ0 92 aa0.44□□□□□ -2.34
VPS41-207ENST00000439468 SULT1C4O75897 302 aa0.44□□□□□ -2.34
VPS41-207ENST00000439468 OR2H2O95918 312 aa0.44□□□□□ -2.34
VPS41-207ENST00000439468 FAM107AO95990 144 aa0.44□□□□□ -2.34
VPS41-207ENST00000439468 SAA2P0DJI9 122 aaPredicted RBP0.44□□□□□ -2.34
VPS41-207ENST00000439468 S100GP29377 79 aa0.44□□□□□ -2.34
VPS41-207ENST00000439468 COX6A2Q02221 97 aa0.44□□□□□ -2.34
VPS41-207ENST00000439468 IZUMO2Q6UXV1 221 aa0.44□□□□□ -2.34
VPS41-207ENST00000439468 OR5A2Q8NGI9 324 aa0.44□□□□□ -2.34
VPS41-207ENST00000439468 DPH3Q96FX2 82 aa0.44□□□□□ -2.34
VPS41-207ENST00000439468 COMMD3Q9UBI1 195 aa0.44□□□□□ -2.34
VPS41-207ENST00000439468 RABAC1Q9UI14 185 aa0.44□□□□□ -2.34
VPS41-207ENST00000439468 TRBV7-1A0A0A6YYK4 115 aa0.43□□□□□ -2.34
VPS41-207ENST00000439468 M0R2Z0 102 aa0.43□□□□□ -2.34
VPS41-207ENST00000439468 TPST1O60507 370 aa0.43□□□□□ -2.34
VPS41-207ENST00000439468 IGKCP01834 107 aa0.43□□□□□ -2.34
VPS41-207ENST00000439468 GUCA1AP43080 201 aaPredicted RBP0.43□□□□□ -2.34
VPS41-207ENST00000439468 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
VPS41-207ENST00000439468 RPL39P5Q59GN2 51 aa0.43□□□□□ -2.34
VPS41-207ENST00000439468 Q5VV11 94 aa0.43□□□□□ -2.34
VPS41-207ENST00000439468 SMIM15Q7Z3B0 74 aa0.43□□□□□ -2.34
VPS41-207ENST00000439468 TMEM229BQ8NBD8 167 aa0.43□□□□□ -2.34
VPS41-207ENST00000439468 TMEM263Q8WUH6 116 aaKnown RBP0.43□□□□□ -2.34
VPS41-207ENST00000439468 LINC00208Q96KT6 92 aa0.43□□□□□ -2.34
VPS41-207ENST00000439468 PRO0255Q9UI72 69 aa0.43□□□□□ -2.34
VPS41-207ENST00000439468 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.42□□□□□ -2.34
VPS41-207ENST00000439468 LOC101927531A0A1B0GV80 90 aa0.42□□□□□ -2.34
VPS41-207ENST00000439468 C20orf202A1L168 122 aa0.42□□□□□ -2.34
VPS41-207ENST00000439468 IL7P13232 177 aa0.42□□□□□ -2.34
VPS41-207ENST00000439468 SPINK13Q1W4C9 94 aa0.42□□□□□ -2.34
VPS41-207ENST00000439468 IDO2Q6ZQW0 420 aa0.42□□□□□ -2.34
VPS41-207ENST00000439468 ATOH7Q8N100 152 aa0.42□□□□□ -2.34
VPS41-207ENST00000439468 C1orf54Q8WWF1 131 aa0.42□□□□□ -2.34
VPS41-207ENST00000439468 SPTSSAQ969W0 71 aa0.42□□□□□ -2.34
VPS41-207ENST00000439468 RERGLQ9H628 205 aa0.42□□□□□ -2.34
VPS41-207ENST00000439468 TRAV12-2A0A075B6T6 113 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 PRORSD1PA6NEY8 169 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 H0YJX3 145 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 HBDP02042 147 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 ETV6P41212 452 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 GTF2A1P52655 376 aaPredicted RBP0.41□□□□□ -2.34
VPS41-207ENST00000439468 FXYD6P3P58550 94 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 RPL37P61927 97 aaKnown RBP0.41□□□□□ -2.34
VPS41-207ENST00000439468 MT1XP80297 61 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 IQCJQ1A5X6 159 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 MORN2Q502X0 79 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 XAF1Q6GPH4 301 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 ENHOQ6UWT2 76 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 TOMM20LQ6UXN7 152 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 SLC25A26Q70HW3 274 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 OTOSQ8NHW6 89 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 TMEM167AQ8TBQ9 72 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 ARL11Q969Q4 196 aa0.41□□□□□ -2.34
VPS41-207ENST00000439468 C9orf92A6NGG3 77 aa0.4□□□□□ -2.35
VPS41-207ENST00000439468 A6NIN4 97 aa0.4□□□□□ -2.35
VPS41-207ENST00000439468 CPSF4LA6NMK7 179 aaKnown RBP0.4□□□□□ -2.35
VPS41-207ENST00000439468 MIF4GDA9UHW6 222 aaKnown RBP0.4□□□□□ -2.35
VPS41-207ENST00000439468 I3L2K1 104 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms