RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SMCPP49901 116 aaPredicted RBP8.9□□□□□ -0.98
CDC42-202ENST00000344548 C2orf48Q96LS8 159 aa8.88□□□□□ -0.99
CDC42-202ENST00000344548 SMIM11BQ8TCY0 68 aa8.88□□□□□ -0.99
CDC42-202ENST00000344548 TRAV13-2A0A0B4J235 113 aa8.87□□□□□ -0.99
CDC42-202ENST00000344548 SYCNQ0VAF6 134 aa8.87□□□□□ -0.99
CDC42-202ENST00000344548 Q6ZRP5 223 aa8.87□□□□□ -0.99
CDC42-202ENST00000344548 NCR3O14931 201 aa8.87□□□□□ -0.99
CDC42-202ENST00000344548 KMT2AQ03164 3969 aa8.86□□□□□ -0.99
CDC42-202ENST00000344548 TRBV20-1A0A075B6N2 111 aa8.86□□□□□ -0.99
CDC42-202ENST00000344548 OR13C6PQ8NH95 151 aa8.86□□□□□ -0.99
CDC42-202ENST00000344548 FAM218AQ96MZ4 157 aa8.85□□□□□ -0.99
CDC42-202ENST00000344548 GAGE2EQ4V326 116 aa8.85□□□□□ -0.99
CDC42-202ENST00000344548 GAGE2DQ9UEU5 116 aa8.85□□□□□ -0.99
CDC42-202ENST00000344548 NDUFC2O95298 119 aa8.84□□□□□ -0.99
CDC42-202ENST00000344548 LYRM7Q5U5X0 104 aa8.84□□□□□ -0.99
CDC42-202ENST00000344548 NDUFC2-KCTD14E9PQ53 114 aa8.84□□□□□ -0.99
CDC42-202ENST00000344548 F8W1H4 67 aa8.84□□□□□ -0.99
CDC42-202ENST00000344548 RPL28P46779 137 aaKnown RBP8.84□□□□□ -0.99
CDC42-202ENST00000344548 RMI2Q96E14 147 aa8.84□□□□□ -0.99
CDC42-202ENST00000344548 NBDYA0A0U1RRE5 68 aa8.83□□□□□ -1
CDC42-202ENST00000344548 M0R2N4 97 aa8.83□□□□□ -1
CDC42-202ENST00000344548 C9JAW5 83 aa8.83□□□□□ -1
CDC42-202ENST00000344548 ETDBQ3ZM63 59 aa8.83□□□□□ -1
CDC42-202ENST00000344548 LST1O00453 97 aa8.82□□□□□ -1
CDC42-202ENST00000344548 COX6CP09669 75 aa8.82□□□□□ -1
CDC42-202ENST00000344548 RPL18AQ02543 176 aaKnown RBP8.82□□□□□ -1
CDC42-202ENST00000344548 LINC01620Q4KN68 170 aa8.82□□□□□ -1
CDC42-202ENST00000344548 C9orf129Q5T035 196 aaKnown RBP8.82□□□□□ -1
CDC42-202ENST00000344548 CARD19Q96LW7 228 aa8.82□□□□□ -1
CDC42-202ENST00000344548 ATXN8Q156A1 80 aa8.82□□□□□ -1
CDC42-202ENST00000344548 MUC7Q8TAX7 377 aa8.8□□□□□ -1
CDC42-202ENST00000344548 VPREB1P12018 145 aa8.8□□□□□ -1
CDC42-202ENST00000344548 DNAH2Q9P225 4427 aa8.79□□□□□ -1
CDC42-202ENST00000344548 Q6ZRN7 208 aaPredicted RBP8.79□□□□□ -1
CDC42-202ENST00000344548 PSCAO43653 123 aa8.79□□□□□ -1
CDC42-202ENST00000344548 SLC25A20O43772 301 aa8.79□□□□□ -1
CDC42-202ENST00000344548 OCIAD2Q56VL3 154 aa8.79□□□□□ -1
CDC42-202ENST00000344548 A0A087WYN8 130 aa8.78□□□□□ -1
CDC42-202ENST00000344548 F8WDY8 70 aa8.78□□□□□ -1
CDC42-202ENST00000344548 SERTAD4-AS1Q5TG53 156 aa8.78□□□□□ -1
CDC42-202ENST00000344548 TMEM126AQ9H061 195 aa8.78□□□□□ -1
CDC42-202ENST00000344548 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.77□□□□□ -1.01
CDC42-202ENST00000344548 TRBV10-3A0A0K0K1G6 114 aa8.77□□□□□ -1.01
CDC42-202ENST00000344548 FAM168BA1KXE4 195 aa8.77□□□□□ -1.01
CDC42-202ENST00000344548 LRCOL1A6NCL2 159 aa8.77□□□□□ -1.01
CDC42-202ENST00000344548 IGLV6-57P01721 117 aa8.77□□□□□ -1.01
CDC42-202ENST00000344548 KRTAP7-1Q8IUC3 87 aa8.77□□□□□ -1.01
CDC42-202ENST00000344548 S100A7L2Q5SY68 101 aa8.76□□□□□ -1.01
CDC42-202ENST00000344548 TLX1NBP0CAT3 122 aa8.75□□□□□ -1.01
CDC42-202ENST00000344548 TRBV10-2A0A0K0K1G8 114 aa8.75□□□□□ -1.01
CDC42-202ENST00000344548 RNF151Q2KHN1 245 aa8.75□□□□□ -1.01
CDC42-202ENST00000344548 C6orf99Q4VX62 202 aa8.75□□□□□ -1.01
CDC42-202ENST00000344548 GAGE2BQ13066 116 aa8.74□□□□□ -1.01
CDC42-202ENST00000344548 TTC32Q5I0X7 151 aa8.74□□□□□ -1.01
CDC42-202ENST00000344548 ANKRD29Q8N6D5 301 aa8.74□□□□□ -1.01
CDC42-202ENST00000344548 C22orf24Q9Y442 160 aa8.73□□□□□ -1.01
CDC42-202ENST00000344548 Q6ZR54 194 aa8.72□□□□□ -1.01
CDC42-202ENST00000344548 FUSP35637 526 aaKnown RBP eCLIP8.71□□□□□ -1.01
CDC42-202ENST00000344548 TRACP01848 142 aa8.71□□□□□ -1.02
CDC42-202ENST00000344548 CNBPP62633 177 aaKnown RBP8.71□□□□□ -1.02
CDC42-202ENST00000344548 TEN1Q86WV5 123 aa8.71□□□□□ -1.02
CDC42-202ENST00000344548 WWC2-AS2Q96NR7 200 aa8.71□□□□□ -1.02
CDC42-202ENST00000344548 H0YGX0 51 aa8.7□□□□□ -1.02
CDC42-202ENST00000344548 A0A096LNI7 61 aa8.7□□□□□ -1.02
CDC42-202ENST00000344548 M0R378 163 aa8.7□□□□□ -1.02
CDC42-202ENST00000344548 LY6G6CO95867 125 aa8.7□□□□□ -1.02
CDC42-202ENST00000344548 LINC01600Q96MT4 127 aa8.7□□□□□ -1.02
CDC42-202ENST00000344548 TEX49A0A1B0GTD5 131 aa8.69□□□□□ -1.02
CDC42-202ENST00000344548 C7orf33Q8WU49 177 aa8.69□□□□□ -1.02
CDC42-202ENST00000344548 TRAV23DV6A0A075B6W5 121 aa8.69□□□□□ -1.02
CDC42-202ENST00000344548 IGKV2-24A0A0C4DH68 120 aa8.68□□□□□ -1.02
CDC42-202ENST00000344548 LOC107984640A0A0U1RRK4 108 aa8.68□□□□□ -1.02
CDC42-202ENST00000344548 M0QXV9 152 aa8.68□□□□□ -1.02
CDC42-202ENST00000344548 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
CDC42-202ENST00000344548 H3BT86 120 aa8.67□□□□□ -1.02
CDC42-202ENST00000344548 BAALC-AS2P0C853 105 aa8.67□□□□□ -1.02
CDC42-202ENST00000344548 FAM19A5Q7Z5A7 132 aaPredicted RBP8.67□□□□□ -1.02
CDC42-202ENST00000344548 HYDINQ4G0P3 5121 aa8.67□□□□□ -1.02
CDC42-202ENST00000344548 RPL37AP8A6NKH3 93 aa8.66□□□□□ -1.02
CDC42-202ENST00000344548 K7ERU9 68 aa8.66□□□□□ -1.02
CDC42-202ENST00000344548 ZNF73O43830 326 aaPredicted RBP8.66□□□□□ -1.02
CDC42-202ENST00000344548 A0A1W2PNN7 141 aa8.66□□□□□ -1.02
CDC42-202ENST00000344548 Q8N814 137 aa8.66□□□□□ -1.02
CDC42-202ENST00000344548 PLA2G2DQ9UNK4 145 aa8.66□□□□□ -1.02
CDC42-202ENST00000344548 NKAPP1Q8N9T2 125 aa8.65□□□□□ -1.02
CDC42-202ENST00000344548 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.02
CDC42-202ENST00000344548 A0A087WTM6 91 aa8.65□□□□□ -1.03
CDC42-202ENST00000344548 LINC00575Q6W349 94 aa8.65□□□□□ -1.03
CDC42-202ENST00000344548 PANO1I0J062 215 aa8.64□□□□□ -1.03
CDC42-202ENST00000344548 C9orf163Q8N9P6 203 aa8.64□□□□□ -1.03
CDC42-202ENST00000344548 C16orf90A8MZG2 172 aa8.64□□□□□ -1.03
CDC42-202ENST00000344548 C14orf177Q52M58 125 aa8.64□□□□□ -1.03
CDC42-202ENST00000344548 PPDPFLQ8WWR9 84 aa8.64□□□□□ -1.03
CDC42-202ENST00000344548 LINC00167Q96N53 147 aa8.64□□□□□ -1.03
CDC42-202ENST00000344548 DNAH17Q9UFH2 4485 aa8.64□□□□□ -1.03
CDC42-202ENST00000344548 DNAL4O96015 105 aa8.63□□□□□ -1.03
CDC42-202ENST00000344548 DIRC1Q969H9 104 aa8.63□□□□□ -1.03
CDC42-202ENST00000344548 IGLV5-37A0A075B6J1 123 aa8.63□□□□□ -1.03
CDC42-202ENST00000344548 SDIM1Q6ZPB5 146 aa8.63□□□□□ -1.03
CDC42-202ENST00000344548 IGLV1-50A0A075B6I6 118 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms