RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 Q8NDZ9 215 aa6.95□□□□□ -1.3
COPB1-201ENST00000249923 A0A0U1RQV1 116 aa6.95□□□□□ -1.3
COPB1-201ENST00000249923 FAM222AQ5U5X8 452 aa6.94□□□□□ -1.3
COPB1-201ENST00000249923 C5orf47Q569G3 176 aa6.94□□□□□ -1.3
COPB1-201ENST00000249923 IBA57-AS1B1ANH7 110 aa6.93□□□□□ -1.3
COPB1-201ENST00000249923 DEFB105AQ8NG35 78 aa6.93□□□□□ -1.3
COPB1-201ENST00000249923 NANOS2P60321 138 aaKnown RBP6.93□□□□□ -1.3
COPB1-201ENST00000249923 MPLKIPQ8TAP9 179 aa6.93□□□□□ -1.3
COPB1-201ENST00000249923 MRAPQ8TCY5 172 aa6.93□□□□□ -1.3
COPB1-201ENST00000249923 A0A1B0GUV1 79 aa6.92□□□□□ -1.3
COPB1-201ENST00000249923 KIAA0087Q14695 138 aa6.92□□□□□ -1.3
COPB1-201ENST00000249923 TENM3Q9P273 2699 aa6.92□□□□□ -1.3
COPB1-201ENST00000249923 PF4P02776 101 aa6.92□□□□□ -1.3
COPB1-201ENST00000249923 CELA1Q9UNI1 258 aa6.92□□□□□ -1.3
COPB1-201ENST00000249923 BAHCC1Q9P281 2608 aa6.92□□□□□ -1.3
COPB1-201ENST00000249923 LY6G6DO95868 133 aa6.91□□□□□ -1.3
COPB1-201ENST00000249923 DEFB135Q30KP9 77 aa6.91□□□□□ -1.3
COPB1-201ENST00000249923 LINC01561Q8N1V8 128 aa6.91□□□□□ -1.3
COPB1-201ENST00000249923 PRO0255Q9UI72 69 aa6.91□□□□□ -1.3
COPB1-201ENST00000249923 LRCOL1A6NCL2 159 aa6.9□□□□□ -1.3
COPB1-201ENST00000249923 NBEAL1Q6ZS30 2694 aa6.9□□□□□ -1.31
COPB1-201ENST00000249923 DNAH3Q8TD57 4116 aa6.9□□□□□ -1.31
COPB1-201ENST00000249923 Q6ZQY7 126 aa6.89□□□□□ -1.31
COPB1-201ENST00000249923 Q8IZM0 81 aa6.89□□□□□ -1.31
COPB1-201ENST00000249923 Q8N9L7 120 aa6.89□□□□□ -1.31
COPB1-201ENST00000249923 DPH3Q96FX2 82 aa6.89□□□□□ -1.31
COPB1-201ENST00000249923 C6orf223Q8N319 242 aa6.89□□□□□ -1.31
COPB1-201ENST00000249923 OBSCN-AS1Q96MR7 158 aa6.89□□□□□ -1.31
COPB1-201ENST00000249923 RMI2Q96E14 147 aa6.88□□□□□ -1.31
COPB1-201ENST00000249923 FBN1P35555 2871 aaKnown RBP6.88□□□□□ -1.31
COPB1-201ENST00000249923 FLNBO75369 2602 aaKnown RBP6.88□□□□□ -1.31
COPB1-201ENST00000249923 KLK12Q9UKR0 248 aa6.88□□□□□ -1.31
COPB1-201ENST00000249923 BRK1Q8WUW1 75 aa6.88□□□□□ -1.31
COPB1-201ENST00000249923 HIGD2BQ4VC39 106 aa6.87□□□□□ -1.31
COPB1-201ENST00000249923 Q8NAQ8 132 aa6.87□□□□□ -1.31
COPB1-201ENST00000249923 TMEM256-PLSCR3K7ERE1 68 aa6.87□□□□□ -1.31
COPB1-201ENST00000249923 LYSTQ99698 3801 aa6.87□□□□□ -1.31
COPB1-201ENST00000249923 FAM236DA0A1B0GTK5 79 aa6.86□□□□□ -1.31
COPB1-201ENST00000249923 INAFM1C9JVW0 142 aa6.86□□□□□ -1.31
COPB1-201ENST00000249923 J3QKU1 62 aa6.86□□□□□ -1.31
COPB1-201ENST00000249923 FAM236CP0DP71 79 aa6.86□□□□□ -1.31
COPB1-201ENST00000249923 TMEM258P61165 79 aa6.86□□□□□ -1.31
COPB1-201ENST00000249923 C10orf25Q5T742 122 aa6.86□□□□□ -1.31
COPB1-201ENST00000249923 Q6JHZ5 121 aa6.86□□□□□ -1.31
COPB1-201ENST00000249923 UNQ6190/PRO20217Q6UXQ8 127 aa6.86□□□□□ -1.31
COPB1-201ENST00000249923 CHCHD10Q8WYQ3 142 aaPredicted RBP6.86□□□□□ -1.31
COPB1-201ENST00000249923 PRR4Q16378 134 aa6.86□□□□□ -1.31
COPB1-201ENST00000249923 F8WEM9 126 aa6.85□□□□□ -1.31
COPB1-201ENST00000249923 C3orf84H3BNL1 204 aa6.85□□□□□ -1.31
COPB1-201ENST00000249923 CCKP06307 115 aa6.85□□□□□ -1.31
COPB1-201ENST00000249923 CRYGAP11844 174 aa6.85□□□□□ -1.31
COPB1-201ENST00000249923 Q8N814 137 aa6.85□□□□□ -1.31
COPB1-201ENST00000249923 LYRM9A8MSI8 78 aa6.85□□□□□ -1.31
COPB1-201ENST00000249923 JMJD7-PLA2G4BH0Y9G9 81 aa6.85□□□□□ -1.31
COPB1-201ENST00000249923 REG3AQ06141 175 aa6.85□□□□□ -1.31
COPB1-201ENST00000249923 CD164L2Q6UWJ8 174 aa6.85□□□□□ -1.31
COPB1-201ENST00000249923 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
COPB1-201ENST00000249923 C2orf48Q96LS8 159 aa6.85□□□□□ -1.31
COPB1-201ENST00000249923 NOTCH1P46531 2555 aa6.84□□□□□ -1.31
COPB1-201ENST00000249923 M0R2N4 97 aa6.84□□□□□ -1.31
COPB1-201ENST00000249923 SPAG11BQ08648 103 aa6.84□□□□□ -1.31
COPB1-201ENST00000249923 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.84□□□□□ -1.32
COPB1-201ENST00000249923 TRAV10A0A0B4J240 114 aa6.83□□□□□ -1.32
COPB1-201ENST00000249923 LINC00167Q96N53 147 aa6.83□□□□□ -1.32
COPB1-201ENST00000249923 C9orf66Q5T8R8 295 aa6.82□□□□□ -1.32
COPB1-201ENST00000249923 OXTP01178 125 aa6.81□□□□□ -1.32
COPB1-201ENST00000249923 STAB1Q9NY15 2570 aa6.8□□□□□ -1.32
COPB1-201ENST00000249923 ZNF561-AS1K7EIQ3 104 aa6.8□□□□□ -1.32
COPB1-201ENST00000249923 NDUFC2O95298 119 aa6.8□□□□□ -1.32
COPB1-201ENST00000249923 PRR34Q9NV39 138 aa6.8□□□□□ -1.32
COPB1-201ENST00000249923 COL6A5A8TX70 2615 aa6.8□□□□□ -1.32
COPB1-201ENST00000249923 COX17Q14061 63 aa6.8□□□□□ -1.32
COPB1-201ENST00000249923 IGHV4-30-4P0DP06 118 aa6.79□□□□□ -1.32
COPB1-201ENST00000249923 MGAM2Q2M2H8 2515 aa6.79□□□□□ -1.32
COPB1-201ENST00000249923 CYSRT1A8MQ03 144 aa6.78□□□□□ -1.32
COPB1-201ENST00000249923 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
COPB1-201ENST00000249923 LINC01547P58512 204 aaPredicted RBP6.78□□□□□ -1.32
COPB1-201ENST00000249923 Q6ZVQ6 151 aa6.78□□□□□ -1.32
COPB1-201ENST00000249923 TRBV10-3A0A0K0K1G6 114 aa6.78□□□□□ -1.32
COPB1-201ENST00000249923 APOC4P55056 127 aa6.77□□□□□ -1.33
COPB1-201ENST00000249923 CAMK2N2Q96S95 79 aa6.77□□□□□ -1.33
COPB1-201ENST00000249923 TM2D3Q9BRN9 247 aa6.77□□□□□ -1.33
COPB1-201ENST00000249923 MIFP14174 115 aa6.77□□□□□ -1.33
COPB1-201ENST00000249923 NREPQ16612 68 aa6.77□□□□□ -1.33
COPB1-201ENST00000249923 LELP1Q5T871 98 aa6.77□□□□□ -1.33
COPB1-201ENST00000249923 RETNQ9HD89 108 aa6.77□□□□□ -1.33
COPB1-201ENST00000249923 DIRC1Q969H9 104 aa6.76□□□□□ -1.33
COPB1-201ENST00000249923 MAST4O15021 2626 aa6.76□□□□□ -1.33
COPB1-201ENST00000249923 A0A0J9YWU9 116 aa6.76□□□□□ -1.33
COPB1-201ENST00000249923 C6orf48Q9UBA6 75 aa6.76□□□□□ -1.33
COPB1-201ENST00000249923 DNAH10Q8IVF4 4471 aa6.76□□□□□ -1.33
COPB1-201ENST00000249923 LYPD5Q6UWN5 251 aa6.75□□□□□ -1.33
COPB1-201ENST00000249923 KRTAP26-1Q6PEX3 210 aa6.75□□□□□ -1.33
COPB1-201ENST00000249923 WIPF1O43516 503 aa6.75□□□□□ -1.33
COPB1-201ENST00000249923 IGLV6-57P01721 117 aa6.75□□□□□ -1.33
COPB1-201ENST00000249923 SPART-AS1P0CW21 52 aa6.75□□□□□ -1.33
COPB1-201ENST00000249923 LINC00336Q6ZUF6 198 aa6.75□□□□□ -1.33
COPB1-201ENST00000249923 WFDC10BQ8IUB3 73 aa6.75□□□□□ -1.33
COPB1-201ENST00000249923 BPY2O14599 106 aa6.74□□□□□ -1.33
COPB1-201ENST00000249923 LINC00575Q6W349 94 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms