RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 SLPIP03973 132 aa7.27□□□□□ -1.25
SMARCA1-205ENST00000617310 COX7BP24311 80 aa7.27□□□□□ -1.25
SMARCA1-205ENST00000617310 TMEM223A0PJW6 202 aa7.26□□□□□ -1.25
SMARCA1-205ENST00000617310 FHL2Q14192 279 aa7.26□□□□□ -1.25
SMARCA1-205ENST00000617310 CELSR1Q9NYQ6 3014 aa7.26□□□□□ -1.25
SMARCA1-205ENST00000617310 RPL37AP8A6NKH3 93 aa7.26□□□□□ -1.25
SMARCA1-205ENST00000617310 C9orf116Q5BN46 136 aaPredicted RBP7.26□□□□□ -1.25
SMARCA1-205ENST00000617310 C6orf99Q4VX62 202 aa7.26□□□□□ -1.25
SMARCA1-205ENST00000617310 WFDC10BQ8IUB3 73 aa7.26□□□□□ -1.25
SMARCA1-205ENST00000617310 HIGD1BQ9P298 99 aa7.26□□□□□ -1.25
SMARCA1-205ENST00000617310 U3KQK5 164 aa7.26□□□□□ -1.25
SMARCA1-205ENST00000617310 IGKV3D-7A0A0C4DH55 119 aa7.25□□□□□ -1.25
SMARCA1-205ENST00000617310 UNQ6190/PRO20217Q6UXQ8 127 aa7.25□□□□□ -1.25
SMARCA1-205ENST00000617310 ZNF580Q9UK33 172 aa7.25□□□□□ -1.25
SMARCA1-205ENST00000617310 CELA1Q9UNI1 258 aa7.25□□□□□ -1.25
SMARCA1-205ENST00000617310 IGLV4-69A0A075B6H9 119 aa7.25□□□□□ -1.25
SMARCA1-205ENST00000617310 LINC00308Q8TCZ7 52 aa7.25□□□□□ -1.25
SMARCA1-205ENST00000617310 CDC42SE2Q9NRR3 84 aa7.25□□□□□ -1.25
SMARCA1-205ENST00000617310 CYSRT1A8MQ03 144 aa7.24□□□□□ -1.25
SMARCA1-205ENST00000617310 H7C423 109 aa7.24□□□□□ -1.25
SMARCA1-205ENST00000617310 CNFNQ9BYD5 112 aa7.24□□□□□ -1.25
SMARCA1-205ENST00000617310 Q8N2B8 174 aa7.24□□□□□ -1.25
SMARCA1-205ENST00000617310 PYGO1Q9Y3Y4 419 aa7.24□□□□□ -1.25
SMARCA1-205ENST00000617310 IBA57-AS1B1ANH7 110 aa7.24□□□□□ -1.25
SMARCA1-205ENST00000617310 TAX1BP3O14907 124 aa7.24□□□□□ -1.25
SMARCA1-205ENST00000617310 YPEL4Q96NS1 127 aa7.23□□□□□ -1.25
SMARCA1-205ENST00000617310 B9D2Q9BPU9 175 aa7.23□□□□□ -1.25
SMARCA1-205ENST00000617310 NREPQ16612 68 aa7.23□□□□□ -1.25
SMARCA1-205ENST00000617310 LINC00242Q5T6M2 205 aa7.23□□□□□ -1.25
SMARCA1-205ENST00000617310 NUPR2A6NF83 97 aa7.23□□□□□ -1.25
SMARCA1-205ENST00000617310 FHL3Q13643 280 aa7.22□□□□□ -1.25
SMARCA1-205ENST00000617310 C14orf132Q9NPU4 83 aa7.22□□□□□ -1.25
SMARCA1-205ENST00000617310 POM121L12Q8N7R1 296 aa7.21□□□□□ -1.25
SMARCA1-205ENST00000617310 UBE2D1P51668 147 aa7.21□□□□□ -1.25
SMARCA1-205ENST00000617310 SBSPONQ8IVN8 264 aa7.21□□□□□ -1.26
SMARCA1-205ENST00000617310 RBM3P98179 157 aaKnown RBP7.21□□□□□ -1.26
SMARCA1-205ENST00000617310 BEAN1Q3B7T3 259 aa7.21□□□□□ -1.26
SMARCA1-205ENST00000617310 Q9UF83 564 aa7.2□□□□□ -1.26
SMARCA1-205ENST00000617310 URB1-AS1Q96HZ7 61 aa7.2□□□□□ -1.26
SMARCA1-205ENST00000617310 IGIPA6NJ69 53 aa7.2□□□□□ -1.26
SMARCA1-205ENST00000617310 H0Y9J4 135 aa7.2□□□□□ -1.26
SMARCA1-205ENST00000617310 LINC00310P59036 64 aa7.2□□□□□ -1.26
SMARCA1-205ENST00000617310 C7orf33Q8WU49 177 aa7.2□□□□□ -1.26
SMARCA1-205ENST00000617310 ITPR2Q14571 2701 aa7.19□□□□□ -1.26
SMARCA1-205ENST00000617310 USP17L23D6RBM5 183 aa7.19□□□□□ -1.26
SMARCA1-205ENST00000617310 TCL1BO95988 128 aa7.19□□□□□ -1.26
SMARCA1-205ENST00000617310 C6orf223Q8N319 242 aa7.19□□□□□ -1.26
SMARCA1-205ENST00000617310 PRR3P79522 188 aaKnown RBP7.19□□□□□ -1.26
SMARCA1-205ENST00000617310 CHCHD7Q9BUK0 85 aa7.18□□□□□ -1.26
SMARCA1-205ENST00000617310 ITPR1Q14643 2758 aa7.18□□□□□ -1.26
SMARCA1-205ENST00000617310 NDUFB1O75438 58 aa7.18□□□□□ -1.26
SMARCA1-205ENST00000617310 FSHBP01225 129 aa7.18□□□□□ -1.26
SMARCA1-205ENST00000617310 COX6A2Q02221 97 aa7.18□□□□□ -1.26
SMARCA1-205ENST00000617310 SPINK6Q6UWN8 80 aa7.18□□□□□ -1.26
SMARCA1-205ENST00000617310 TEN1Q86WV5 123 aa7.18□□□□□ -1.26
SMARCA1-205ENST00000617310 LYPD5Q6UWN5 251 aa7.18□□□□□ -1.26
SMARCA1-205ENST00000617310 Q6ZQY7 126 aa7.18□□□□□ -1.26
SMARCA1-205ENST00000617310 SPANXDQ9BXN6 97 aa7.17□□□□□ -1.26
SMARCA1-205ENST00000617310 MRPS36P82909 103 aaKnown RBP7.17□□□□□ -1.26
SMARCA1-205ENST00000617310 HRCT1Q6UXD1 115 aa7.17□□□□□ -1.26
SMARCA1-205ENST00000617310 TRIAP1O43715 76 aa7.16□□□□□ -1.26
SMARCA1-205ENST00000617310 SCXQ7RTU7 201 aa7.16□□□□□ -1.26
SMARCA1-205ENST00000617310 CITED1Q99966 193 aa7.16□□□□□ -1.26
SMARCA1-205ENST00000617310 NBEAL2Q6ZNJ1 2754 aa7.16□□□□□ -1.26
SMARCA1-205ENST00000617310 TRBV10-2A0A0K0K1G8 114 aa7.16□□□□□ -1.26
SMARCA1-205ENST00000617310 SPANXB1Q9NS25 103 aaPredicted RBP7.16□□□□□ -1.26
SMARCA1-205ENST00000617310 SMIM1B2RUZ4 78 aa7.16□□□□□ -1.26
SMARCA1-205ENST00000617310 TRAV23DV6A0A075B6W5 121 aa7.15□□□□□ -1.26
SMARCA1-205ENST00000617310 C11orf72Q8NBR9 251 aa7.15□□□□□ -1.26
SMARCA1-205ENST00000617310 TMEM256-PLSCR3K7ERE1 68 aa7.15□□□□□ -1.26
SMARCA1-205ENST00000617310 LOC107984640A0A0U1RRK4 108 aa7.15□□□□□ -1.27
SMARCA1-205ENST00000617310 JMJD7-PLA2G4BH0Y9G9 81 aa7.15□□□□□ -1.27
SMARCA1-205ENST00000617310 A0A096LNT2 108 aa7.14□□□□□ -1.27
SMARCA1-205ENST00000617310 A0A0B4J2C4 111 aa7.14□□□□□ -1.27
SMARCA1-205ENST00000617310 C3orf84H3BNL1 204 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 Q8IZM0 81 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 IGLV5-52A0A0A0MRZ9 124 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 IGLV9-49A0A0B4J1Y8 123 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 TEX49A0A1B0GTD5 131 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 H3BT86 120 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 TSPEAR-AS2P59090 65 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 A0A096LNJ9 63 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 M0QXV9 152 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 ESRGQ1W209 222 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 C1orf134Q5TEV5 83 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 COX8CQ7Z4L0 72 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 Q8N3U1 123 aa7.13□□□□□ -1.27
SMARCA1-205ENST00000617310 NBPF19A0A087WUL8 3843 aa7.12□□□□□ -1.27
SMARCA1-205ENST00000617310 MDFIQ99750 246 aa7.12□□□□□ -1.27
SMARCA1-205ENST00000617310 X6R8D5 127 aa7.12□□□□□ -1.27
SMARCA1-205ENST00000617310 PLAC8L1A1L4L8 177 aa7.12□□□□□ -1.27
SMARCA1-205ENST00000617310 STAB2Q8WWQ8 2551 aa7.11□□□□□ -1.27
SMARCA1-205ENST00000617310 M0R378 163 aa7.11□□□□□ -1.27
SMARCA1-205ENST00000617310 C2orf91Q6ZV80 131 aa7.11□□□□□ -1.27
SMARCA1-205ENST00000617310 SMIM11BQ8TCY0 68 aa7.11□□□□□ -1.27
SMARCA1-205ENST00000617310 KIF25-AS1Q9Y6Z4 181 aa7.11□□□□□ -1.27
SMARCA1-205ENST00000617310 CCKP06307 115 aa7.11□□□□□ -1.27
SMARCA1-205ENST00000617310 NHLRC4P0CG21 123 aaPredicted RBP7.1□□□□□ -1.27
SMARCA1-205ENST00000617310 NTM-AS1Q6ZSK4 140 aa7.1□□□□□ -1.27
SMARCA1-205ENST00000617310 ZNF73O43830 326 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms