RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 SULT1A2P50226 295 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 ADAMTSL4-AS1Q5T5F5 129 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 SMIM3Q9BZL3 60 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 EIF5A2Q9GZV4 153 aaKnown RBP0.66□□□□□ -2.3
KNL1-211ENST00000533001 SSBP3-AS1Q7Z2R9 100 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 OR2D3Q8NGH3 330 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 AP1S3Q96PC3 154 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 MCUBQ9NWR8 336 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 RNF24Q9Y225 148 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 COX7A2LO14548 114 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 SRP19P09132 144 aaKnown RBP0.66□□□□□ -2.3
KNL1-211ENST00000533001 NPSP0C0P6 89 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 LINC00469Q8N7U9 141 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 ISOC2Q96AB3 205 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 RMI2Q96E14 147 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 MAP1LC3B2A6NCE7 125 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 HBG1P69891 147 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 HBG2P69892 147 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 MAP1LC3BQ9GZQ8 125 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 HMSDA8MTL9 139 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 CNPY1Q3B7I2 92 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 PACRGQ96M98 296 aaPredicted RBP0.66□□□□□ -2.3
KNL1-211ENST00000533001 CCDC32Q9BV29 185 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 ENY2Q9NPA8 101 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 PHLDA3Q9Y5J5 127 aa0.66□□□□□ -2.3
KNL1-211ENST00000533001 SPRR5A0A1B0GTR4 108 aa0.65□□□□□ -2.3
KNL1-211ENST00000533001 SMCO3A2RU48 225 aa0.65□□□□□ -2.3
KNL1-211ENST00000533001 RANBP1P43487 201 aa0.65□□□□□ -2.3
KNL1-211ENST00000533001 LRRC37A5PQ49AS3 106 aa0.65□□□□□ -2.3
KNL1-211ENST00000533001 Q6ZRX8 168 aa0.65□□□□□ -2.3
KNL1-211ENST00000533001 BAGE2Q86Y30 109 aa0.65□□□□□ -2.3
KNL1-211ENST00000533001 VCX3BQ9H321 246 aa0.65□□□□□ -2.3
KNL1-211ENST00000533001 A0A087WVE0 104 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 F2Z2F3 143 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 TMEM250H0YL14 139 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 TMEM97Q5BJF2 176 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 MT1MQ8N339 61 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 RPS10P5Q9NQ39 176 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 CCDC160A6NGH7 325 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 ERICH4A6NGS2 130 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 HIGD1CA8MV81 97 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 I3L3M4 83 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 RGS5O15539 181 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 RPL23P62829 140 aaKnown RBP0.65□□□□□ -2.31
KNL1-211ENST00000533001 C20orf78Q9BR46 151 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 TMEM167BQ9NRX6 74 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 MT-ND6P03923 174 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 SPRR2DP22532 72 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 PDZD11Q5EBL8 140 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 SPAG11AQ6PDA7 123 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 CAMK2N2Q96S95 79 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 NKX6-2Q9C056 277 aaPredicted RBP0.65□□□□□ -2.31
KNL1-211ENST00000533001 C7orf77A4D0Y5 90 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 GIPP09681 153 aaPredicted RBP0.65□□□□□ -2.31
KNL1-211ENST00000533001 IGLC3P0DOY3 106 aa0.65□□□□□ -2.31
KNL1-211ENST00000533001 SMIM31A0A1B0GVY4 71 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 A0A1B0GWB2 263 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 FAM25AB3EWG3 89 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 FAM25CB3EWG5 89 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 FAM25GB3EWG6 89 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 TCAPO15273 167 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 S100A10P60903 97 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 ENKURQ8TC29 256 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 TIMM17AQ99595 171 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 SPANXA1Q9NS26 97 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 TPT1P13693 172 aaKnown RBP0.64□□□□□ -2.31
KNL1-211ENST00000533001 RAB31Q13636 194 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 ZNF56Q15929 161 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 FAM74A1Q5RGS3 127 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 PCNPQ8WW12 178 aaKnown RBP0.64□□□□□ -2.31
KNL1-211ENST00000533001 MT1LQ93083 61 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 OSTCQ9NRP0 149 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 TRAV13-1A0A0B4J241 112 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 TRBV10-3A0A0K0K1G6 114 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 LINC00862A6NCI5 91 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 IGKV2-30P06310 120 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 GAGE2EQ4V326 116 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 STX12Q86Y82 276 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 GAGE2DQ9UEU5 116 aa0.64□□□□□ -2.31
KNL1-211ENST00000533001 C11orf86A6NJI1 115 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 A6NN06 94 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 COTL1Q14019 142 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 TMEM136Q6ZRR5 245 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 MRAP2Q96G30 205 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 C10orf91Q5T1B1 145 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 SCGB3A2Q96PL1 93 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 KCNIP2Q9NS61 270 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 KRTAP9-6A8MVA2 160 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 SCGB1D2O95969 90 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 IFNA7P01567 189 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 ORAOV1Q8WV07 137 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 TOMM6Q96B49 74 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 LINC00472Q9H8W2 130 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 D6R8Y8 96 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 DEFA1P59665 94 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 IFITM2Q01629 132 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 CD164Q04900 197 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 PYDC2Q56P42 97 aa0.63□□□□□ -2.31
KNL1-211ENST00000533001 GEMIN7Q9H840 131 aaKnown RBP0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms