RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 TEX43Q6ZNM6 134 aa3.7□□□□□ -1.82
PABPC1-220ENST00000522658 SLC51BQ86UW2 128 aa3.7□□□□□ -1.82
PABPC1-220ENST00000522658 C20orf78Q9BR46 151 aa3.7□□□□□ -1.82
PABPC1-220ENST00000522658 EIF5A2Q9GZV4 153 aaKnown RBP3.7□□□□□ -1.82
PABPC1-220ENST00000522658 IGHV3OR16-9A0A0B4J2B5 98 aa3.69□□□□□ -1.82
PABPC1-220ENST00000522658 LINC00862A6NCI5 91 aa3.69□□□□□ -1.82
PABPC1-220ENST00000522658 ZNF727A8MUV8 499 aa3.69□□□□□ -1.82
PABPC1-220ENST00000522658 F8W036 122 aa3.69□□□□□ -1.82
PABPC1-220ENST00000522658 MRPS36P82909 103 aaKnown RBP3.69□□□□□ -1.82
PABPC1-220ENST00000522658 C6orf226Q5I0X4 101 aa3.69□□□□□ -1.82
PABPC1-220ENST00000522658 LINC00469Q8N7U9 141 aa3.69□□□□□ -1.82
PABPC1-220ENST00000522658 SMIM2Q9BVW6 85 aa3.69□□□□□ -1.82
PABPC1-220ENST00000522658 CTDSP1Q9GZU7 261 aa3.69□□□□□ -1.82
PABPC1-220ENST00000522658 NAT8BQ9UHF3 227 aa3.69□□□□□ -1.82
PABPC1-220ENST00000522658 IGKV2D-26A0A0A0MRZ7 120 aa3.68□□□□□ -1.82
PABPC1-220ENST00000522658 A0A1B0GW15 77 aa3.68□□□□□ -1.82
PABPC1-220ENST00000522658 BCE1O60756 84 aa3.68□□□□□ -1.82
PABPC1-220ENST00000522658 MRPL51Q4U2R6 128 aaKnown RBP3.68□□□□□ -1.82
PABPC1-220ENST00000522658 C2orf82Q6UX34 121 aa3.68□□□□□ -1.82
PABPC1-220ENST00000522658 LINC00173Q6ZV60 143 aa3.68□□□□□ -1.82
PABPC1-220ENST00000522658 MRPL55Q7Z7F7 128 aaKnown RBP3.68□□□□□ -1.82
PABPC1-220ENST00000522658 LINC00304Q8N9R0 145 aa3.68□□□□□ -1.82
PABPC1-220ENST00000522658 NKAPP1Q8N9T2 125 aa3.68□□□□□ -1.82
PABPC1-220ENST00000522658 TMEM141Q96I45 108 aa3.68□□□□□ -1.82
PABPC1-220ENST00000522658 RETNLBQ9BQ08 111 aa3.68□□□□□ -1.82
PABPC1-220ENST00000522658 OSTCQ9NRP0 149 aa3.68□□□□□ -1.82
PABPC1-220ENST00000522658 C22orf24Q9Y442 160 aa3.68□□□□□ -1.82
PABPC1-220ENST00000522658 TNFRSF6BO95407 300 aa3.67□□□□□ -1.82
PABPC1-220ENST00000522658 RPL32P62910 135 aaKnown RBP3.67□□□□□ -1.82
PABPC1-220ENST00000522658 ADIRFQ15847 76 aa3.67□□□□□ -1.82
PABPC1-220ENST00000522658 FAM104BQ5XKR9 115 aa3.67□□□□□ -1.82
PABPC1-220ENST00000522658 LINC01551Q86U37 167 aa3.67□□□□□ -1.82
PABPC1-220ENST00000522658 KRTAP11-1Q8IUC1 163 aa3.67□□□□□ -1.82
PABPC1-220ENST00000522658 ALKBH7Q9BT30 221 aaPredicted RBP3.67□□□□□ -1.82
PABPC1-220ENST00000522658 XAGE1AQ9HD64 81 aa3.67□□□□□ -1.82
PABPC1-220ENST00000522658 IGLV7-46A0A075B6I9 117 aa3.66□□□□□ -1.82
PABPC1-220ENST00000522658 A0A087X002 238 aa3.66□□□□□ -1.82
PABPC1-220ENST00000522658 D6R8Y8 96 aa3.66□□□□□ -1.82
PABPC1-220ENST00000522658 PPBPP02775 128 aa3.66□□□□□ -1.82
PABPC1-220ENST00000522658 CXCL5P42830 114 aa3.66□□□□□ -1.82
PABPC1-220ENST00000522658 SEC11AP67812 179 aa3.66□□□□□ -1.82
PABPC1-220ENST00000522658 TPRXLQ17RH7 258 aa3.66□□□□□ -1.82
PABPC1-220ENST00000522658 PAPPA-AS1Q5QFB9 102 aa3.66□□□□□ -1.82
PABPC1-220ENST00000522658 C9orf129Q5T035 196 aaKnown RBP3.66□□□□□ -1.82
PABPC1-220ENST00000522658 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
PABPC1-220ENST00000522658 LINC00337Q8N6G1 96 aa3.66□□□□□ -1.82
PABPC1-220ENST00000522658 GEMIN7Q9H840 131 aaKnown RBP3.66□□□□□ -1.82
PABPC1-220ENST00000522658 TP73-AS1Q9UF72 201 aa3.66□□□□□ -1.82
PABPC1-220ENST00000522658 MUC2Q02817 5179 aa3.66□□□□□ -1.82
PABPC1-220ENST00000522658 IGLV4-3A0A075B6K6 122 aa3.65□□□□□ -1.83
PABPC1-220ENST00000522658 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
PABPC1-220ENST00000522658 F8VRH5 84 aa3.65□□□□□ -1.83
PABPC1-220ENST00000522658 LINC01547P58512 204 aaPredicted RBP3.65□□□□□ -1.83
PABPC1-220ENST00000522658 MRPL54Q6P161 138 aaKnown RBP3.65□□□□□ -1.83
PABPC1-220ENST00000522658 ALKAL2Q6UX46 152 aa3.65□□□□□ -1.83
PABPC1-220ENST00000522658 Q8IZM0 81 aa3.65□□□□□ -1.83
PABPC1-220ENST00000522658 ORMDL3Q8N138 153 aa3.65□□□□□ -1.83
PABPC1-220ENST00000522658 LINC01561Q8N1V8 128 aa3.65□□□□□ -1.83
PABPC1-220ENST00000522658 VCX2Q9H322 139 aa3.65□□□□□ -1.83
PABPC1-220ENST00000522658 CYSLTR1Q9Y271 337 aa3.65□□□□□ -1.83
PABPC1-220ENST00000522658 TRBV24-1A0A075B6N3 115 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 GAGE10A6NGK3 116 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 RPL37AP8A6NKH3 93 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 NPYP01303 97 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 HERVK_113P63121 156 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 KIAA0087Q14695 138 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 FAM229BQ4G0N7 80 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 FAM74A3Q4VXF1 159 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 LINC00242Q5T6M2 205 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 URB1-AS1Q96HZ7 61 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 PRELID3AQ96N28 172 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 MAP1LC3AQ9H492 121 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 NDUFA12Q9UI09 145 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 PYGO1Q9Y3Y4 419 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 V9GYV3 84 aa3.64□□□□□ -1.83
PABPC1-220ENST00000522658 G0S2P27469 103 aa3.63□□□□□ -1.83
PABPC1-220ENST00000522658 ORMDL2Q53FV1 153 aa3.63□□□□□ -1.83
PABPC1-220ENST00000522658 FAM19A1Q7Z5A9 133 aa3.63□□□□□ -1.83
PABPC1-220ENST00000522658 PPDPFQ9H3Y8 114 aa3.63□□□□□ -1.83
PABPC1-220ENST00000522658 ANAPC11Q9NYG5 84 aa3.63□□□□□ -1.83
PABPC1-220ENST00000522658 NAT8Q9UHE5 227 aa3.63□□□□□ -1.83
PABPC1-220ENST00000522658 IGKV2-28A0A075B6P5 120 aa3.62□□□□□ -1.83
PABPC1-220ENST00000522658 LOC389332A0A1B0GUA5 103 aa3.62□□□□□ -1.83
PABPC1-220ENST00000522658 IGKV2D-28P01615 120 aa3.62□□□□□ -1.83
PABPC1-220ENST00000522658 CTAG1AP78358 180 aa3.62□□□□□ -1.83
PABPC1-220ENST00000522658 PNRC1Q12796 327 aaPredicted RBP3.62□□□□□ -1.83
PABPC1-220ENST00000522658 C2orf66Q6UXQ4 117 aa3.62□□□□□ -1.83
PABPC1-220ENST00000522658 TMEM136Q6ZRR5 245 aa3.62□□□□□ -1.83
PABPC1-220ENST00000522658 KRTAP7-1Q8IUC3 87 aa3.62□□□□□ -1.83
PABPC1-220ENST00000522658 TCTE3Q8IZS6 198 aa3.62□□□□□ -1.83
PABPC1-220ENST00000522658 LINC00167Q96N53 147 aa3.62□□□□□ -1.83
PABPC1-220ENST00000522658 A0A1B0GVG6 124 aa3.61□□□□□ -1.83
PABPC1-220ENST00000522658 SMIM27A0A1W2PRY6 76 aa3.61□□□□□ -1.83
PABPC1-220ENST00000522658 ATP5LO75964 103 aa3.61□□□□□ -1.83
PABPC1-220ENST00000522658 RPL23P62829 140 aaKnown RBP3.61□□□□□ -1.83
PABPC1-220ENST00000522658 SPAG11AQ6PDA7 123 aa3.61□□□□□ -1.83
PABPC1-220ENST00000522658 FP248Q71RG6 208 aaPredicted RBP3.61□□□□□ -1.83
PABPC1-220ENST00000522658 ATP5L2Q7Z4Y8 100 aa3.61□□□□□ -1.83
PABPC1-220ENST00000522658 LAMTOR2Q9Y2Q5 125 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms