RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.35
SNRNP200-207ENST00000493271 IGHV3OR16-9A0A0B4J2B5 98 aa6.59□□□□□ -1.35
SNRNP200-207ENST00000493271 UBE2BP63146 152 aa6.59□□□□□ -1.35
SNRNP200-207ENST00000493271 KIAA1644Q3SXP7 199 aa6.59□□□□□ -1.35
SNRNP200-207ENST00000493271 Q6ZUT4 128 aa6.59□□□□□ -1.35
SNRNP200-207ENST00000493271 AMN1Q8IY45 258 aa6.59□□□□□ -1.35
SNRNP200-207ENST00000493271 M0QXV9 152 aa6.58□□□□□ -1.36
SNRNP200-207ENST00000493271 JOSD1Q15040 202 aaPredicted RBP6.58□□□□□ -1.36
SNRNP200-207ENST00000493271 RNASE13Q5GAN3 156 aaKnown RBP6.58□□□□□ -1.36
SNRNP200-207ENST00000493271 PYY3Q5JQD4 70 aa6.58□□□□□ -1.36
SNRNP200-207ENST00000493271 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
SNRNP200-207ENST00000493271 C18orf32Q8TCD1 76 aa6.58□□□□□ -1.36
SNRNP200-207ENST00000493271 ALKBH7Q9BT30 221 aaPredicted RBP6.58□□□□□ -1.36
SNRNP200-207ENST00000493271 TRBV30A0A0K0K1B3 111 aa6.57□□□□□ -1.36
SNRNP200-207ENST00000493271 FAM168BA1KXE4 195 aa6.57□□□□□ -1.36
SNRNP200-207ENST00000493271 RPL32P62910 135 aaKnown RBP6.57□□□□□ -1.36
SNRNP200-207ENST00000493271 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
SNRNP200-207ENST00000493271 NRACQ8N912 160 aa6.57□□□□□ -1.36
SNRNP200-207ENST00000493271 C20orf78Q9BR46 151 aa6.57□□□□□ -1.36
SNRNP200-207ENST00000493271 SPANXA1Q9NS26 97 aa6.57□□□□□ -1.36
SNRNP200-207ENST00000493271 C6orf48Q9UBA6 75 aa6.57□□□□□ -1.36
SNRNP200-207ENST00000493271 HSBP1O75506 76 aa6.56□□□□□ -1.36
SNRNP200-207ENST00000493271 LINC00310P59036 64 aa6.56□□□□□ -1.36
SNRNP200-207ENST00000493271 MRPS36P82909 103 aaKnown RBP6.56□□□□□ -1.36
SNRNP200-207ENST00000493271 GAGE2EQ4V326 116 aa6.56□□□□□ -1.36
SNRNP200-207ENST00000493271 GAGE2DQ9UEU5 116 aa6.56□□□□□ -1.36
SNRNP200-207ENST00000493271 NDUFC2-KCTD14E9PQ53 114 aa6.55□□□□□ -1.36
SNRNP200-207ENST00000493271 NUPR1O60356 82 aa6.55□□□□□ -1.36
SNRNP200-207ENST00000493271 ZNF861PO60384 105 aa6.55□□□□□ -1.36
SNRNP200-207ENST00000493271 C10orf25Q5T742 122 aa6.55□□□□□ -1.36
SNRNP200-207ENST00000493271 UNQ6190/PRO20217Q6UXQ8 127 aa6.55□□□□□ -1.36
SNRNP200-207ENST00000493271 CHCHD1Q96BP2 118 aaKnown RBP6.55□□□□□ -1.36
SNRNP200-207ENST00000493271 SMKR1H3BMG3 65 aa6.54□□□□□ -1.36
SNRNP200-207ENST00000493271 PPBPP02775 128 aa6.54□□□□□ -1.36
SNRNP200-207ENST00000493271 FAM104BQ5XKR9 115 aa6.54□□□□□ -1.36
SNRNP200-207ENST00000493271 ORMDL3Q8N138 153 aa6.54□□□□□ -1.36
SNRNP200-207ENST00000493271 LAMTOR2Q9Y2Q5 125 aa6.54□□□□□ -1.36
SNRNP200-207ENST00000493271 PCP4L1A6NKN8 68 aa6.53□□□□□ -1.36
SNRNP200-207ENST00000493271 KRTAP7-1Q8IUC3 87 aa6.53□□□□□ -1.36
SNRNP200-207ENST00000493271 KRTAP9-6A0A140TA67 174 aa6.52□□□□□ -1.37
SNRNP200-207ENST00000493271 TSTD3H0UI37 97 aa6.52□□□□□ -1.37
SNRNP200-207ENST00000493271 KIAA0087Q14695 138 aa6.52□□□□□ -1.37
SNRNP200-207ENST00000493271 LBHQ53QV2 105 aaPredicted RBP6.52□□□□□ -1.37
SNRNP200-207ENST00000493271 FA2HQ7L5A8 372 aa6.52□□□□□ -1.37
SNRNP200-207ENST00000493271 LINC01561Q8N1V8 128 aa6.52□□□□□ -1.37
SNRNP200-207ENST00000493271 D6R8Y8 96 aa6.51□□□□□ -1.37
SNRNP200-207ENST00000493271 SCGB1D1O95968 90 aa6.51□□□□□ -1.37
SNRNP200-207ENST00000493271 CKS2P33552 79 aa6.51□□□□□ -1.37
SNRNP200-207ENST00000493271 IFI27P40305 119 aaPredicted RBP6.51□□□□□ -1.37
SNRNP200-207ENST00000493271 RPL39P62891 51 aaKnown RBP6.51□□□□□ -1.37
SNRNP200-207ENST00000493271 MRPL51Q4U2R6 128 aaKnown RBP6.51□□□□□ -1.37
SNRNP200-207ENST00000493271 PRELID3AQ96N28 172 aa6.51□□□□□ -1.37
SNRNP200-207ENST00000493271 SMIM2Q9BVW6 85 aa6.51□□□□□ -1.37
SNRNP200-207ENST00000493271 TNFRSF6BO95407 300 aa6.5□□□□□ -1.37
SNRNP200-207ENST00000493271 TSPAN13O95857 204 aa6.5□□□□□ -1.37
SNRNP200-207ENST00000493271 LINC00614P0C842 121 aa6.5□□□□□ -1.37
SNRNP200-207ENST00000493271 CRYGAP11844 174 aa6.5□□□□□ -1.37
SNRNP200-207ENST00000493271 RPL28P46779 137 aaKnown RBP6.5□□□□□ -1.37
SNRNP200-207ENST00000493271 KRTDAPP60985 99 aa6.5□□□□□ -1.37
SNRNP200-207ENST00000493271 C9orf129Q5T035 196 aaKnown RBP6.5□□□□□ -1.37
SNRNP200-207ENST00000493271 FAM104AQ969W3 186 aa6.5□□□□□ -1.37
SNRNP200-207ENST00000493271 MAP1LC3AQ9H492 121 aa6.5□□□□□ -1.37
SNRNP200-207ENST00000493271 PYGO1Q9Y3Y4 419 aa6.5□□□□□ -1.37
SNRNP200-207ENST00000493271 C20orf202A1L168 122 aa6.49□□□□□ -1.37
SNRNP200-207ENST00000493271 CTAG1AP78358 180 aa6.49□□□□□ -1.37
SNRNP200-207ENST00000493271 FAM19A2Q8N3H0 131 aa6.49□□□□□ -1.37
SNRNP200-207ENST00000493271 TYMSOSQ8TAI1 123 aa6.49□□□□□ -1.37
SNRNP200-207ENST00000493271 TP73-AS1Q9UF72 201 aa6.49□□□□□ -1.37
SNRNP200-207ENST00000493271 HSPB8Q9UJY1 196 aa6.49□□□□□ -1.37
SNRNP200-207ENST00000493271 LEPROTL1O95214 131 aa6.48□□□□□ -1.37
SNRNP200-207ENST00000493271 LINC00242Q5T6M2 205 aa6.48□□□□□ -1.37
SNRNP200-207ENST00000493271 URB1-AS1Q96HZ7 61 aa6.48□□□□□ -1.37
SNRNP200-207ENST00000493271 NXT2Q9NPJ8 142 aaKnown RBP6.48□□□□□ -1.37
SNRNP200-207ENST00000493271 C22orf24Q9Y442 160 aa6.48□□□□□ -1.37
SNRNP200-207ENST00000493271 NPYP01303 97 aa6.47□□□□□ -1.37
SNRNP200-207ENST00000493271 PRSS2P07478 247 aa6.47□□□□□ -1.37
SNRNP200-207ENST00000493271 C3orf79P0CE67 100 aa6.47□□□□□ -1.37
SNRNP200-207ENST00000493271 PMCHL1Q16048 86 aa6.47□□□□□ -1.37
SNRNP200-207ENST00000493271 C2orf82Q6UX34 121 aa6.47□□□□□ -1.37
SNRNP200-207ENST00000493271 TEX43Q6ZNM6 134 aa6.47□□□□□ -1.37
SNRNP200-207ENST00000493271 C2orf88Q9BSF0 95 aa6.47□□□□□ -1.37
SNRNP200-207ENST00000493271 VAMP8Q9BV40 100 aa6.47□□□□□ -1.37
SNRNP200-207ENST00000493271 A0A087X002 238 aa6.46□□□□□ -1.38
SNRNP200-207ENST00000493271 BCE1O60756 84 aa6.46□□□□□ -1.38
SNRNP200-207ENST00000493271 HBDP02042 147 aa6.46□□□□□ -1.38
SNRNP200-207ENST00000493271 CKS1BP61024 79 aa6.46□□□□□ -1.38
SNRNP200-207ENST00000493271 TPRXLQ17RH7 258 aa6.46□□□□□ -1.38
SNRNP200-207ENST00000493271 Q6ZN92 141 aa6.46□□□□□ -1.38
SNRNP200-207ENST00000493271 TMEM141Q96I45 108 aa6.46□□□□□ -1.38
SNRNP200-207ENST00000493271 IGLV4-3A0A075B6K6 122 aa6.45□□□□□ -1.38
SNRNP200-207ENST00000493271 MRPL55Q7Z7F7 128 aaKnown RBP6.45□□□□□ -1.38
SNRNP200-207ENST00000493271 Q8IZM0 81 aa6.45□□□□□ -1.38
SNRNP200-207ENST00000493271 MAP1LC3CQ9BXW4 147 aa6.45□□□□□ -1.38
SNRNP200-207ENST00000493271 CDIP1Q9H305 208 aa6.45□□□□□ -1.38
SNRNP200-207ENST00000493271 MUC17Q685J3 4493 aa6.45□□□□□ -1.38
SNRNP200-207ENST00000493271 LOC389332A0A1B0GUA5 103 aa6.44□□□□□ -1.38
SNRNP200-207ENST00000493271 LINC01546A6NGU7 62 aa6.44□□□□□ -1.38
SNRNP200-207ENST00000493271 PRSS47A8MTI9 375 aa6.44□□□□□ -1.38
SNRNP200-207ENST00000493271 NPSP0C0P6 89 aa6.44□□□□□ -1.38
SNRNP200-207ENST00000493271 DDTP30046 118 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms