RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 NBASA2RRP1 2371 aa6.27□□□□□ -1.41
GABRE-209ENST00000486255 ZNF580Q9UK33 172 aa6.27□□□□□ -1.41
GABRE-209ENST00000486255 ATRXP46100 2492 aa6.27□□□□□ -1.41
GABRE-209ENST00000486255 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.27□□□□□ -1.419e-29■□□□□ 11.1
GABRE-209ENST00000486255 BCE1O60756 84 aa6.27□□□□□ -1.41
GABRE-209ENST00000486255 PCNX3Q9H6A9 2034 aa6.26□□□□□ -1.41
GABRE-209ENST00000486255 IGLV4-60A0A075B6I1 120 aa6.26□□□□□ -1.41
GABRE-209ENST00000486255 F8WDY8 70 aa6.26□□□□□ -1.41
GABRE-209ENST00000486255 LINC01556Q5JQF7 62 aa6.26□□□□□ -1.41
GABRE-209ENST00000486255 IGKV2D-30A0A075B6S6 120 aa6.25□□□□□ -1.41
GABRE-209ENST00000486255 IGKV2-30P06310 120 aa6.25□□□□□ -1.41
GABRE-209ENST00000486255 ATP11AUNQ6ZP68 121 aa6.25□□□□□ -1.41
GABRE-209ENST00000486255 C6orf48Q9UBA6 75 aa6.25□□□□□ -1.41
GABRE-209ENST00000486255 TANC2Q9HCD6 1990 aa6.24□□□□□ -1.41
GABRE-209ENST00000486255 C11orf71Q6IPW1 123 aa6.24□□□□□ -1.41
GABRE-209ENST00000486255 TP53AIP1Q9HCN2 124 aa6.24□□□□□ -1.41
GABRE-209ENST00000486255 PLCE1Q9P212 2302 aa6.24□□□□□ -1.41
GABRE-209ENST00000486255 A8MTW9 85 aa6.24□□□□□ -1.41
GABRE-209ENST00000486255 GTF3C1Q12789 2109 aa6.23□□□□□ -1.41
GABRE-209ENST00000486255 SPATA3Q8NHX4 192 aa6.23□□□□□ -1.41
GABRE-209ENST00000486255 IGLV5-52A0A0A0MRZ9 124 aa6.23□□□□□ -1.41
GABRE-209ENST00000486255 IGLV1-40P01703 118 aa6.23□□□□□ -1.41
GABRE-209ENST00000486255 NUPR2A6NF83 97 aa6.23□□□□□ -1.41
GABRE-209ENST00000486255 FSHBP01225 129 aa6.23□□□□□ -1.41
GABRE-209ENST00000486255 LINC01561Q8N1V8 128 aa6.23□□□□□ -1.41
GABRE-209ENST00000486255 MALRD1Q5VYJ5 2156 aa6.22□□□□□ -1.41
GABRE-209ENST00000486255 KIAA0087Q14695 138 aa6.22□□□□□ -1.41
GABRE-209ENST00000486255 A0A096LNJ9 63 aa6.21□□□□□ -1.41
GABRE-209ENST00000486255 FHL2Q14192 279 aa6.21□□□□□ -1.42
GABRE-209ENST00000486255 EDN2P20800 178 aa6.21□□□□□ -1.42
GABRE-209ENST00000486255 C2orf48Q96LS8 159 aa6.21□□□□□ -1.42
GABRE-209ENST00000486255 LINC00337Q8N6G1 96 aa6.2□□□□□ -1.42
GABRE-209ENST00000486255 H3BPC8 53 aa6.2□□□□□ -1.42
GABRE-209ENST00000486255 HTTP42858 3142 aa6.2□□□□□ -1.42
GABRE-209ENST00000486255 DNAH12Q6ZR08 3092 aa6.2□□□□□ -1.42
GABRE-209ENST00000486255 PCSK5Q92824 1860 aa6.2□□□□□ -1.42
GABRE-209ENST00000486255 NCOA6Q14686 2063 aaPredicted RBP6.2□□□□□ -1.42
GABRE-209ENST00000486255 SMCR5Q8TEV8 140 aa6.2□□□□□ -1.42
GABRE-209ENST00000486255 MED13Q9UHV7 2174 aa6.19□□□□□ -1.42
GABRE-209ENST00000486255 OXLD1Q5BKU9 147 aa6.19□□□□□ -1.42
GABRE-209ENST00000486255 SSBP3-AS1Q7Z2R9 100 aa6.19□□□□□ -1.42
GABRE-209ENST00000486255 PCNX1Q96RV3 2341 aa6.19□□□□□ -1.42
GABRE-209ENST00000486255 IGLV8-61A0A075B6I0 122 aa6.19□□□□□ -1.42
GABRE-209ENST00000486255 SMCPP49901 116 aaPredicted RBP6.19□□□□□ -1.42
GABRE-209ENST00000486255 Q6ZSN1 163 aa6.19□□□□□ -1.42
GABRE-209ENST00000486255 KRTAP10-9P60411 292 aa6.18□□□□□ -1.42
GABRE-209ENST00000486255 MDFIQ99750 246 aa6.18□□□□□ -1.42
GABRE-209ENST00000486255 OTOGLQ3ZCN5 2332 aa6.18□□□□□ -1.42
GABRE-209ENST00000486255 ZGRF1Q86YA3 2104 aa6.18□□□□□ -1.42
GABRE-209ENST00000486255 MED13LQ71F56 2210 aa6.17□□□□□ -1.42
GABRE-209ENST00000486255 HCFC1P51610 2035 aa6.17□□□□□ -1.42
GABRE-209ENST00000486255 LINC01006Q8NI28 216 aa6.17□□□□□ -1.42
GABRE-209ENST00000486255 LINC01546A6NGU7 62 aa6.17□□□□□ -1.42
GABRE-209ENST00000486255 Q6ZRU5 148 aa6.17□□□□□ -1.42
GABRE-209ENST00000486255 FAM19A4Q96LR4 140 aa6.17□□□□□ -1.42
GABRE-209ENST00000486255 TNCP24821 2201 aa6.16□□□□□ -1.42
GABRE-209ENST00000486255 A0A1B0GUV1 79 aa6.16□□□□□ -1.42
GABRE-209ENST00000486255 C22orf24Q9Y442 160 aa6.16□□□□□ -1.42
GABRE-209ENST00000486255 MED12LQ86YW9 2145 aa6.16□□□□□ -1.42
GABRE-209ENST00000486255 MUC6Q6W4X9 2439 aa6.16□□□□□ -1.42
GABRE-209ENST00000486255 COX8CQ7Z4L0 72 aa6.16□□□□□ -1.42
GABRE-209ENST00000486255 Q6ZQT0 140 aa6.16□□□□□ -1.42
GABRE-209ENST00000486255 C11orf72Q8NBR9 251 aa6.16□□□□□ -1.42
GABRE-209ENST00000486255 TM2D3Q9BRN9 247 aa6.15□□□□□ -1.42
GABRE-209ENST00000486255 CD164Q04900 197 aa6.15□□□□□ -1.42
GABRE-209ENST00000486255 Q8N2B8 174 aa6.14□□□□□ -1.43
GABRE-209ENST00000486255 CYP4F30PQ9H0H9 118 aa6.14□□□□□ -1.43
GABRE-209ENST00000486255 LOC110117498A0A087WWA1 95 aa6.14□□□□□ -1.43
GABRE-209ENST00000486255 J3QL48 77 aa6.14□□□□□ -1.43
GABRE-209ENST00000486255 PRO0461Q9UI25 63 aa6.14□□□□□ -1.43
GABRE-209ENST00000486255 ODF3L2Q3SX64 289 aa6.14□□□□□ -1.43
GABRE-209ENST00000486255 FAM218AQ96MZ4 157 aa6.13□□□□□ -1.43
GABRE-209ENST00000486255 TRAV22A0A0B4J277 110 aa6.13□□□□□ -1.43
GABRE-209ENST00000486255 LYPD5Q6UWN5 251 aa6.13□□□□□ -1.43
GABRE-209ENST00000486255 A0A1B0GW54 56 aa6.13□□□□□ -1.43
GABRE-209ENST00000486255 A8MUN3 132 aa6.13□□□□□ -1.43
GABRE-209ENST00000486255 PTPRBP23467 1997 aa6.12□□□□□ -1.43
GABRE-209ENST00000486255 COA5Q86WW8 74 aa6.12□□□□□ -1.43
GABRE-209ENST00000486255 ZFHX2Q9C0A1 2572 aaPredicted RBP6.12□□□□□ -1.43
GABRE-209ENST00000486255 FREM1Q5H8C1 2179 aa6.11□□□□□ -1.43
GABRE-209ENST00000486255 IGLV5-39A0A0G2JS06 123 aa6.11□□□□□ -1.43
GABRE-209ENST00000486255 BPTFQ12830 3046 aa6.11□□□□□ -1.43
GABRE-209ENST00000486255 CDSNQ15517 529 aa6.11□□□□□ -1.43
GABRE-209ENST00000486255 MOBPQ13875 183 aa6.11□□□□□ -1.43
GABRE-209ENST00000486255 COL27A1Q8IZC6 1860 aaPredicted RBP6.11□□□□□ -1.43
GABRE-209ENST00000486255 LINC00313P59037 77 aa6.11□□□□□ -1.43
GABRE-209ENST00000486255 ELOF1P60002 83 aaKnown RBP6.11□□□□□ -1.43
GABRE-209ENST00000486255 BRI3O95415 125 aa6.1□□□□□ -1.43
GABRE-209ENST00000486255 RPL37AP61513 92 aaKnown RBP6.1□□□□□ -1.43
GABRE-209ENST00000486255 SPACA4Q8TDM5 124 aa6.1□□□□□ -1.43
GABRE-209ENST00000486255 CHD9Q3L8U1 2897 aa6.09□□□□□ -1.43
GABRE-209ENST00000486255 KTN1-AS1Q86SY8 53 aa6.09□□□□□ -1.43
GABRE-209ENST00000486255 FAM208BQ5VWN6 2430 aa6.09□□□□□ -1.43
GABRE-209ENST00000486255 CRIPTQ9P021 101 aa6.09□□□□□ -1.43
GABRE-209ENST00000486255 WNK1Q9H4A3 2382 aa6.09□□□□□ -1.43
GABRE-209ENST00000486255 LCA10Q71F78 164 aa6.08□□□□□ -1.44
GABRE-209ENST00000486255 PTPRQQ9UMZ3 2332 aa6.08□□□□□ -1.44
GABRE-209ENST00000486255 RAI1Q7Z5J4 1906 aaPredicted RBP6.08□□□□□ -1.44
GABRE-209ENST00000486255 LINC00476Q8WZB0 136 aa6.08□□□□□ -1.44
GABRE-209ENST00000486255 LINC01600Q96MT4 127 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms