RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 POLR2KP53803 58 aaKnown RBP5.57□□□□□ -1.52
NEDD9-203ENST00000397378 SPAG11BQ08648 103 aa5.57□□□□□ -1.52
NEDD9-203ENST00000397378 ZNF345Q14585 488 aa5.57□□□□□ -1.52
NEDD9-203ENST00000397378 ALKAL2Q6UX46 152 aa5.57□□□□□ -1.52
NEDD9-203ENST00000397378 SMIM20Q8N5G0 67 aa5.57□□□□□ -1.52
NEDD9-203ENST00000397378 TMEM126AQ9H061 195 aa5.57□□□□□ -1.52
NEDD9-203ENST00000397378 RPP21Q9H633 154 aaKnown RBP5.57□□□□□ -1.52
NEDD9-203ENST00000397378 ST20Q9HBF5 79 aa5.57□□□□□ -1.52
NEDD9-203ENST00000397378 MUC17Q685J3 4493 aa5.56□□□□□ -1.52
NEDD9-203ENST00000397378 TRBV27A0A0K0K1C4 114 aa5.56□□□□□ -1.52
NEDD9-203ENST00000397378 FABP4P15090 132 aa5.56□□□□□ -1.52
NEDD9-203ENST00000397378 SMAGPQ0VAQ4 97 aa5.56□□□□□ -1.52
NEDD9-203ENST00000397378 C6orf226Q5I0X4 101 aa5.56□□□□□ -1.52
NEDD9-203ENST00000397378 C5orf38Q86SI9 138 aa5.56□□□□□ -1.52
NEDD9-203ENST00000397378 OCC1Q8TAD7 63 aa5.56□□□□□ -1.52
NEDD9-203ENST00000397378 RNASE7Q9H1E1 156 aaKnown RBP5.56□□□□□ -1.52
NEDD9-203ENST00000397378 HSPB8Q9UJY1 196 aa5.56□□□□□ -1.52
NEDD9-203ENST00000397378 ERG28Q9UKR5 140 aa5.56□□□□□ -1.52
NEDD9-203ENST00000397378 TRAV13-1A0A0B4J241 112 aa5.55□□□□□ -1.52
NEDD9-203ENST00000397378 GAGE10A6NGK3 116 aa5.55□□□□□ -1.52
NEDD9-203ENST00000397378 CRYGAP11844 174 aa5.55□□□□□ -1.52
NEDD9-203ENST00000397378 RPL24P83731 157 aaKnown RBP5.55□□□□□ -1.52
NEDD9-203ENST00000397378 FAM19A5Q7Z5A7 132 aaPredicted RBP5.55□□□□□ -1.52
NEDD9-203ENST00000397378 KRTAP7-1Q8IUC3 87 aa5.55□□□□□ -1.52
NEDD9-203ENST00000397378 TMEM18Q96B42 140 aa5.55□□□□□ -1.52
NEDD9-203ENST00000397378 SMDT1Q9H4I9 107 aa5.55□□□□□ -1.52
NEDD9-203ENST00000397378 SPANXB1Q9NS25 103 aaPredicted RBP5.55□□□□□ -1.52
NEDD9-203ENST00000397378 SS18L2Q9UHA2 77 aa5.55□□□□□ -1.52
NEDD9-203ENST00000397378 NDUFA1O15239 70 aa5.54□□□□□ -1.52
NEDD9-203ENST00000397378 UBE2BP63146 152 aa5.54□□□□□ -1.52
NEDD9-203ENST00000397378 GTF2H5Q6ZYL4 71 aa5.54□□□□□ -1.52
NEDD9-203ENST00000397378 YPEL4Q96NS1 127 aa5.54□□□□□ -1.52
NEDD9-203ENST00000397378 UBE2D4Q9Y2X8 147 aa5.54□□□□□ -1.52
NEDD9-203ENST00000397378 K7EN84 100 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 ZNF861PO60384 105 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 HIST1H2BKO60814 126 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 HIST1H2BJP06899 126 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 HIST1H2BOP23527 126 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 HIST1H2BBP33778 126 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 HIST1H2BDP58876 126 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 HIST1H2BCP62807 126 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 HIST2H2BEQ16778 126 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 RNASE13Q5GAN3 156 aaKnown RBP5.53□□□□□ -1.52
NEDD9-203ENST00000397378 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.53□□□□□ -1.52
NEDD9-203ENST00000397378 C10orf25Q5T742 122 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 ERASQ7Z444 233 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 OR13C6PQ8NH95 151 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 HIST1H2BHQ93079 126 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 HIST1H2BNQ99877 126 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 HIST1H2BMQ99879 126 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 TIMM21Q9BVV7 248 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 RPS10P5Q9NQ39 176 aa5.53□□□□□ -1.52
NEDD9-203ENST00000397378 IGHV3OR16-9A0A0B4J2B5 98 aa5.52□□□□□ -1.53
NEDD9-203ENST00000397378 TPRXLQ17RH7 258 aa5.52□□□□□ -1.53
NEDD9-203ENST00000397378 GAGE2EQ4V326 116 aa5.52□□□□□ -1.53
NEDD9-203ENST00000397378 UNQ6190/PRO20217Q6UXQ8 127 aa5.52□□□□□ -1.53
NEDD9-203ENST00000397378 Q6ZUT4 128 aa5.52□□□□□ -1.53
NEDD9-203ENST00000397378 RETNLBQ9BQ08 111 aa5.52□□□□□ -1.53
NEDD9-203ENST00000397378 C6orf48Q9UBA6 75 aa5.52□□□□□ -1.53
NEDD9-203ENST00000397378 UQCR10Q9UDW1 63 aa5.52□□□□□ -1.53
NEDD9-203ENST00000397378 GAGE2DQ9UEU5 116 aa5.52□□□□□ -1.53
NEDD9-203ENST00000397378 NAT8BQ9UHF3 227 aa5.52□□□□□ -1.53
NEDD9-203ENST00000397378 KANTRA0A1W2PQU2 76 aa5.51□□□□□ -1.53
NEDD9-203ENST00000397378 A8MWL6 223 aa5.51□□□□□ -1.53
NEDD9-203ENST00000397378 VCYO14598 125 aa5.51□□□□□ -1.53
NEDD9-203ENST00000397378 FCER1GP30273 86 aa5.51□□□□□ -1.53
NEDD9-203ENST00000397378 HSD52Q0P140 79 aa5.51□□□□□ -1.53
NEDD9-203ENST00000397378 TEX43Q6ZNM6 134 aa5.51□□□□□ -1.53
NEDD9-203ENST00000397378 CTDSP1Q9GZU7 261 aa5.51□□□□□ -1.53
NEDD9-203ENST00000397378 TMEM191AQ9H0A3 160 aa5.51□□□□□ -1.53
NEDD9-203ENST00000397378 LAMTOR2Q9Y2Q5 125 aa5.51□□□□□ -1.53
NEDD9-203ENST00000397378 A0A087X002 238 aa5.5□□□□□ -1.53
NEDD9-203ENST00000397378 NUPR1O60356 82 aa5.5□□□□□ -1.53
NEDD9-203ENST00000397378 RPS28P62857 69 aaKnown RBP5.5□□□□□ -1.53
NEDD9-203ENST00000397378 HSBP1O75506 76 aa5.49□□□□□ -1.53
NEDD9-203ENST00000397378 PPP1R17O96001 155 aa5.49□□□□□ -1.53
NEDD9-203ENST00000397378 SUMO2P61956 95 aaKnown RBP5.49□□□□□ -1.53
NEDD9-203ENST00000397378 PMVKQ15126 192 aa5.49□□□□□ -1.53
NEDD9-203ENST00000397378 CT83Q5H943 113 aa5.49□□□□□ -1.53
NEDD9-203ENST00000397378 FAM231DQ6ZW35 169 aa5.49□□□□□ -1.53
NEDD9-203ENST00000397378 TYMSOSQ8TAI1 123 aa5.49□□□□□ -1.53
NEDD9-203ENST00000397378 BORCS7Q96B45 105 aa5.49□□□□□ -1.53
NEDD9-203ENST00000397378 KIR2DL4Q99706 377 aa5.49□□□□□ -1.53
NEDD9-203ENST00000397378 V9GYY9 64 aa5.49□□□□□ -1.53
NEDD9-203ENST00000397378 TRBV30A0A0K0K1B3 111 aa5.48□□□□□ -1.53
NEDD9-203ENST00000397378 A0A1B0GUT8 65 aa5.48□□□□□ -1.53
NEDD9-203ENST00000397378 A0A1B0GX51 115 aa5.48□□□□□ -1.53
NEDD9-203ENST00000397378 NDUFC2-KCTD14E9PQ53 114 aa5.48□□□□□ -1.53
NEDD9-203ENST00000397378 KIAA0087Q14695 138 aa5.48□□□□□ -1.53
NEDD9-203ENST00000397378 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
NEDD9-203ENST00000397378 AMN1Q8IY45 258 aa5.48□□□□□ -1.53
NEDD9-203ENST00000397378 NRACQ8N912 160 aa5.48□□□□□ -1.53
NEDD9-203ENST00000397378 FAM104AQ969W3 186 aa5.48□□□□□ -1.53
NEDD9-203ENST00000397378 IGLV7-46A0A075B6I9 117 aa5.47□□□□□ -1.53
NEDD9-203ENST00000397378 A0A0U1RRA0 63 aa5.47□□□□□ -1.53
NEDD9-203ENST00000397378 HIGD1CA8MV81 97 aa5.46□□□□□ -1.54
NEDD9-203ENST00000397378 SMKR1H3BMG3 65 aa5.46□□□□□ -1.54
NEDD9-203ENST00000397378 RPL28P46779 137 aaKnown RBP5.46□□□□□ -1.54
NEDD9-203ENST00000397378 MRPS36P82909 103 aaKnown RBP5.46□□□□□ -1.54
NEDD9-203ENST00000397378 BATFQ16520 125 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms