RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 IGLV1-51P01701 117 aa12.07□□□□□ -0.48
COL4A3BP-203ENST00000380494 SMIM29Q86T20 159 aa12.06□□□□□ -0.48
COL4A3BP-203ENST00000380494 A0A087WSZ3 146 aa12.06□□□□□ -0.48
COL4A3BP-203ENST00000380494 LOC110117498A0A087WWA1 95 aa12.06□□□□□ -0.48
COL4A3BP-203ENST00000380494 LINC00315P59091 139 aa12.06□□□□□ -0.48
COL4A3BP-203ENST00000380494 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.05□□□□□ -0.48
COL4A3BP-203ENST00000380494 C6orf223Q8N319 242 aa12.05□□□□□ -0.48
COL4A3BP-203ENST00000380494 C1orf64Q8NEQ6 169 aa12.05□□□□□ -0.48
COL4A3BP-203ENST00000380494 PTPRSQ13332 1948 aa12.05□□□□□ -0.48
COL4A3BP-203ENST00000380494 Q8N2B8 174 aa12.04□□□□□ -0.48
COL4A3BP-203ENST00000380494 PCNX1Q96RV3 2341 aa12.03□□□□□ -0.48
COL4A3BP-203ENST00000380494 VPREB1P12018 145 aa12.03□□□□□ -0.48
COL4A3BP-203ENST00000380494 H3BPC8 53 aa12.03□□□□□ -0.48
COL4A3BP-203ENST00000380494 FAM218AQ96MZ4 157 aa12.02□□□□□ -0.49
COL4A3BP-203ENST00000380494 Q6ZQT0 140 aa12.01□□□□□ -0.49
COL4A3BP-203ENST00000380494 TP53AIP1Q9HCN2 124 aa12□□□□□ -0.49
COL4A3BP-203ENST00000380494 AVPP01185 164 aa11.99□□□□□ -0.49
COL4A3BP-203ENST00000380494 C11orf72Q8NBR9 251 aa11.99□□□□□ -0.49
COL4A3BP-203ENST00000380494 A8MTW9 85 aa11.99□□□□□ -0.49
COL4A3BP-203ENST00000380494 IGHV3OR16-9A0A0B4J2B5 98 aa11.98□□□□□ -0.49
COL4A3BP-203ENST00000380494 INAFM1C9JVW0 142 aa11.98□□□□□ -0.49
COL4A3BP-203ENST00000380494 CEP192Q8TEP8 1941 aa11.98□□□□□ -0.49
COL4A3BP-203ENST00000380494 C16orf95Q9H693 158 aa11.96□□□□□ -0.5
COL4A3BP-203ENST00000380494 NHLRC4P0CG21 123 aaPredicted RBP11.95□□□□□ -0.5
COL4A3BP-203ENST00000380494 KIAA0087Q14695 138 aa11.95□□□□□ -0.5
COL4A3BP-203ENST00000380494 ERC2-IT1O76042 136 aa11.94□□□□□ -0.5
COL4A3BP-203ENST00000380494 LYPD5Q6UWN5 251 aa11.94□□□□□ -0.5
COL4A3BP-203ENST00000380494 Q6ZRU5 148 aa11.94□□□□□ -0.5
COL4A3BP-203ENST00000380494 ELOF1P60002 83 aaKnown RBP11.93□□□□□ -0.5
COL4A3BP-203ENST00000380494 DEFB116Q30KQ4 102 aa11.93□□□□□ -0.5
COL4A3BP-203ENST00000380494 PRR14LQ5THK1 2151 aa11.93□□□□□ -0.5
COL4A3BP-203ENST00000380494 ARHGAP32A7KAX9 2087 aa11.92□□□□□ -0.5
COL4A3BP-203ENST00000380494 WIPF1O43516 503 aa11.92□□□□□ -0.5
COL4A3BP-203ENST00000380494 CIRBP-AS1Q8TBR5 109 aa11.91□□□□□ -0.5
COL4A3BP-203ENST00000380494 LY6G6DO95868 133 aa11.91□□□□□ -0.5
COL4A3BP-203ENST00000380494 RAI1Q7Z5J4 1906 aaPredicted RBP11.91□□□□□ -0.5
COL4A3BP-203ENST00000380494 Q6ZTC4 211 aa11.91□□□□□ -0.5
COL4A3BP-203ENST00000380494 A0A1B0GU69 56 aa11.9□□□□□ -0.5
COL4A3BP-203ENST00000380494 SERTAD4-AS1Q5TG53 156 aa11.9□□□□□ -0.5
COL4A3BP-203ENST00000380494 MED13LQ71F56 2210 aa11.9□□□□□ -0.5
COL4A3BP-203ENST00000380494 ACYP2P14621 99 aa11.89□□□□□ -0.51
COL4A3BP-203ENST00000380494 SMCR5Q8TEV8 140 aa11.89□□□□□ -0.51
COL4A3BP-203ENST00000380494 LITAFQ99732 161 aa11.89□□□□□ -0.51
COL4A3BP-203ENST00000380494 CDSNQ15517 529 aa11.89□□□□□ -0.51
COL4A3BP-203ENST00000380494 AGRNO00468 2067 aa11.89□□□□□ -0.51
COL4A3BP-203ENST00000380494 ADAMTS20P59510 1910 aa11.89□□□□□ -0.51
COL4A3BP-203ENST00000380494 SPAG11AQ6PDA7 123 aa11.89□□□□□ -0.51
COL4A3BP-203ENST00000380494 DSCAMO60469 2012 aa11.88□□□□□ -0.51
COL4A3BP-203ENST00000380494 Q9UF83 564 aa11.87□□□□□ -0.51
COL4A3BP-203ENST00000380494 C22orf24Q9Y442 160 aa11.87□□□□□ -0.51
COL4A3BP-203ENST00000380494 TM2D3Q9BRN9 247 aa11.86□□□□□ -0.51
COL4A3BP-203ENST00000380494 CD164Q04900 197 aa11.86□□□□□ -0.51
COL4A3BP-203ENST00000380494 EXPH5Q8NEV8 1989 aa11.84□□□□□ -0.51
COL4A3BP-203ENST00000380494 M0R2N4 97 aa11.83□□□□□ -0.52
COL4A3BP-203ENST00000380494 RIF1Q5UIP0 2472 aaKnown RBP11.83□□□□□ -0.52
COL4A3BP-203ENST00000380494 FHL3Q13643 280 aa11.83□□□□□ -0.52
COL4A3BP-203ENST00000380494 Q8NBF4 154 aa11.83□□□□□ -0.52
COL4A3BP-203ENST00000380494 PRO3102Q9H379 93 aa11.83□□□□□ -0.52
COL4A3BP-203ENST00000380494 ANKHD1Q8IWZ3 2542 aaKnown RBP11.82□□□□□ -0.52
COL4A3BP-203ENST00000380494 NUPR2A6NF83 97 aa11.82□□□□□ -0.52
COL4A3BP-203ENST00000380494 NAV3Q8IVL0 2385 aa11.81□□□□□ -0.52
COL4A3BP-203ENST00000380494 RETNLBQ9BQ08 111 aa11.81□□□□□ -0.52
COL4A3BP-203ENST00000380494 C6orf48Q9UBA6 75 aa11.81□□□□□ -0.52
COL4A3BP-203ENST00000380494 LINC01556Q5JQF7 62 aa11.81□□□□□ -0.52
COL4A3BP-203ENST00000380494 CYP4F30PQ9H0H9 118 aa11.81□□□□□ -0.52
COL4A3BP-203ENST00000380494 SPINK1P00995 79 aa11.81□□□□□ -0.52
COL4A3BP-203ENST00000380494 PRLHP81277 87 aa11.81□□□□□ -0.52
COL4A3BP-203ENST00000380494 TECTAO75443 2155 aa11.81□□□□□ -0.52
COL4A3BP-203ENST00000380494 C8orf87E5RJ46 101 aa11.81□□□□□ -0.52
COL4A3BP-203ENST00000380494 LINC00336Q6ZUF6 198 aa11.81□□□□□ -0.52
COL4A3BP-203ENST00000380494 NBASA2RRP1 2371 aa11.78□□□□□ -0.52
COL4A3BP-203ENST00000380494 PRRC2AP48634 2157 aaKnown RBP11.77□□□□□ -0.53
COL4A3BP-203ENST00000380494 C7orf65Q6ZTY9 151 aa11.77□□□□□ -0.53
COL4A3BP-203ENST00000380494 TRAV22A0A0B4J277 110 aa11.76□□□□□ -0.53
COL4A3BP-203ENST00000380494 KLK9Q2XQG4 91 aa11.76□□□□□ -0.53
COL4A3BP-203ENST00000380494 Q6ZRX8 168 aa11.76□□□□□ -0.53
COL4A3BP-203ENST00000380494 KLKP1Q107X0 134 aa11.75□□□□□ -0.53
COL4A3BP-203ENST00000380494 LINC00167Q96N53 147 aa11.75□□□□□ -0.53
COL4A3BP-203ENST00000380494 IGLV5-52A0A0A0MRZ9 124 aa11.75□□□□□ -0.53
COL4A3BP-203ENST00000380494 OXLD1Q5BKU9 147 aa11.75□□□□□ -0.53
COL4A3BP-203ENST00000380494 TET2Q6N021 2002 aaPredicted RBP11.74□□□□□ -0.53
COL4A3BP-203ENST00000380494 A0A1W2PPR1 153 aa11.73□□□□□ -0.53
COL4A3BP-203ENST00000380494 X6R8D5 127 aa11.73□□□□□ -0.53
COL4A3BP-203ENST00000380494 GVQW2A0A096LPI5 108 aaPredicted RBP11.72□□□□□ -0.53
COL4A3BP-203ENST00000380494 PLA2G2AP14555 144 aa11.72□□□□□ -0.53
COL4A3BP-203ENST00000380494 LINC00476Q8WZB0 136 aa11.72□□□□□ -0.53
COL4A3BP-203ENST00000380494 TRBV7-4A0A0J9YYF1 115 aa11.71□□□□□ -0.53
COL4A3BP-203ENST00000380494 H3BNG1 76 aa11.71□□□□□ -0.53
COL4A3BP-203ENST00000380494 IGLV6-57P01721 117 aa11.7□□□□□ -0.54
COL4A3BP-203ENST00000380494 FSHBP01225 129 aa11.68□□□□□ -0.54
COL4A3BP-203ENST00000380494 LY6G6CO95867 125 aa11.67□□□□□ -0.54
COL4A3BP-203ENST00000380494 ATP11AUNQ6ZP68 121 aa11.67□□□□□ -0.54
COL4A3BP-203ENST00000380494 IGKV2D-30A0A075B6S6 120 aa11.67□□□□□ -0.54
COL4A3BP-203ENST00000380494 IGKV2-30P06310 120 aa11.67□□□□□ -0.54
COL4A3BP-203ENST00000380494 MOBPQ13875 183 aa11.67□□□□□ -0.54
COL4A3BP-203ENST00000380494 LOC101927531A0A1B0GV80 90 aa11.65□□□□□ -0.54
COL4A3BP-203ENST00000380494 A8MUN3 132 aa11.64□□□□□ -0.55
COL4A3BP-203ENST00000380494 COA5Q86WW8 74 aa11.64□□□□□ -0.55
COL4A3BP-203ENST00000380494 HIVEP2P31629 2446 aa11.62□□□□□ -0.55
COL4A3BP-203ENST00000380494 A8MWP4 228 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms