RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 A0A1B0GUV1 79 aa10.11□□□□□ -0.79
MSH5-201ENST00000375703 LINC00643Q86TS7 51 aa10.1□□□□□ -0.79
MSH5-201ENST00000375703 A0A096LPF7 62 aa10.1□□□□□ -0.79
MSH5-201ENST00000375703 IMUPQ9GZP8 106 aa10.1□□□□□ -0.79
MSH5-201ENST00000375703 ATP5G1P05496 136 aa10.09□□□□□ -0.79
MSH5-201ENST00000375703 PRO0255Q9UI72 69 aa10.09□□□□□ -0.79
MSH5-201ENST00000375703 GAGE2AQ6NT46 116 aa10.09□□□□□ -0.79
MSH5-201ENST00000375703 CLPSL2Q6UWE3 100 aa10.09□□□□□ -0.79
MSH5-201ENST00000375703 KRTAP10-3P60369 221 aa10.08□□□□□ -0.8
MSH5-201ENST00000375703 X6R8D5 127 aa10.08□□□□□ -0.8
MSH5-201ENST00000375703 ACANP16112 2415 aa10.08□□□□□ -0.8
MSH5-201ENST00000375703 SDIM1Q6ZPB5 146 aa10.07□□□□□ -0.8
MSH5-201ENST00000375703 ANK3Q12955 4377 aaKnown RBP10.07□□□□□ -0.8
MSH5-201ENST00000375703 Q8IZM0 81 aa10.07□□□□□ -0.8
MSH5-201ENST00000375703 LINC00482Q8N8I6 264 aa10.07□□□□□ -0.8
MSH5-201ENST00000375703 SMIM9A6NGZ8 99 aa10.06□□□□□ -0.8
MSH5-201ENST00000375703 PDZD2O15018 2839 aa10.06□□□□□ -0.8
MSH5-201ENST00000375703 LECT2O14960 151 aa10.06□□□□□ -0.8
MSH5-201ENST00000375703 MTORP42345 2549 aa10.05□□□□□ -0.8
MSH5-201ENST00000375703 FAM236AA0A1B0GUQ0 79 aa10.05□□□□□ -0.8
MSH5-201ENST00000375703 FAM236BA0A1B0GV22 79 aa10.05□□□□□ -0.8
MSH5-201ENST00000375703 C9orf129Q5T035 196 aaKnown RBP10.05□□□□□ -0.8
MSH5-201ENST00000375703 LINC01561Q8N1V8 128 aa10.04□□□□□ -0.8
MSH5-201ENST00000375703 LINC00269Q8N2A0 174 aa10.04□□□□□ -0.8
MSH5-201ENST00000375703 SMR3AQ99954 134 aa10.04□□□□□ -0.8
MSH5-201ENST00000375703 LY6G6DO95868 133 aa10.03□□□□□ -0.8
MSH5-201ENST00000375703 C14orf132Q9NPU4 83 aa10.03□□□□□ -0.8
MSH5-201ENST00000375703 SLPIP03973 132 aa10.02□□□□□ -0.81
MSH5-201ENST00000375703 LOC107984640A0A0U1RRK4 108 aa10.02□□□□□ -0.81
MSH5-201ENST00000375703 LYRM9A8MSI8 78 aa10.02□□□□□ -0.81
MSH5-201ENST00000375703 DEFB4AO15263 64 aa10.01□□□□□ -0.81
MSH5-201ENST00000375703 PRR3P79522 188 aaKnown RBP10.01□□□□□ -0.81
MSH5-201ENST00000375703 CD164L2Q6UWJ8 174 aa10.01□□□□□ -0.81
MSH5-201ENST00000375703 C5orf47Q569G3 176 aa10.01□□□□□ -0.81
MSH5-201ENST00000375703 OBSCN-AS1Q96MR7 158 aa10.01□□□□□ -0.81
MSH5-201ENST00000375703 TENM4Q6N022 2769 aa10.01□□□□□ -0.81
MSH5-201ENST00000375703 FN1P02751 2386 aaKnown RBP10□□□□□ -0.81
MSH5-201ENST00000375703 KIAA0087Q14695 138 aa10□□□□□ -0.81
MSH5-201ENST00000375703 CHCHD10Q8WYQ3 142 aaPredicted RBP10□□□□□ -0.81
MSH5-201ENST00000375703 IGLV10-54A0A075B6I4 117 aa10□□□□□ -0.81
MSH5-201ENST00000375703 ANGP03950 147 aaKnown RBP10□□□□□ -0.81
MSH5-201ENST00000375703 CXCL5P42830 114 aa10□□□□□ -0.81
MSH5-201ENST00000375703 ORMDL1Q9P0S3 153 aa9.99□□□□□ -0.81
MSH5-201ENST00000375703 KLK5Q9Y337 293 aaPredicted RBP9.99□□□□□ -0.81
MSH5-201ENST00000375703 NCR3O14931 201 aa9.99□□□□□ -0.81
MSH5-201ENST00000375703 DEFB135Q30KP9 77 aa9.99□□□□□ -0.81
MSH5-201ENST00000375703 REG3AQ06141 175 aa9.98□□□□□ -0.81
MSH5-201ENST00000375703 COX17Q14061 63 aa9.98□□□□□ -0.81
MSH5-201ENST00000375703 SPATA3Q8NHX4 192 aa9.98□□□□□ -0.81
MSH5-201ENST00000375703 C9orf66Q5T8R8 295 aa9.98□□□□□ -0.81
MSH5-201ENST00000375703 Q8N3U1 123 aa9.98□□□□□ -0.81
MSH5-201ENST00000375703 NANOS2P60321 138 aaKnown RBP9.97□□□□□ -0.81
MSH5-201ENST00000375703 DAD1P61803 113 aa9.97□□□□□ -0.81
MSH5-201ENST00000375703 NDUFC2O95298 119 aa9.97□□□□□ -0.81
MSH5-201ENST00000375703 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.81
MSH5-201ENST00000375703 TMEM126AQ9H061 195 aa9.96□□□□□ -0.81
MSH5-201ENST00000375703 NBEAL2Q6ZNJ1 2754 aa9.96□□□□□ -0.82
MSH5-201ENST00000375703 IGHV4-28A0A0C4DH34 117 aa9.96□□□□□ -0.82
MSH5-201ENST00000375703 LINC00846Q9NV44 126 aa9.95□□□□□ -0.82
MSH5-201ENST00000375703 J3QKU1 62 aa9.95□□□□□ -0.82
MSH5-201ENST00000375703 Q8N814 137 aa9.95□□□□□ -0.82
MSH5-201ENST00000375703 ITPR2Q14571 2701 aa9.94□□□□□ -0.82
MSH5-201ENST00000375703 A0A1B0GX51 115 aa9.94□□□□□ -0.82
MSH5-201ENST00000375703 APOC4P55056 127 aa9.94□□□□□ -0.82
MSH5-201ENST00000375703 HIVEP2P31629 2446 aa9.94□□□□□ -0.82
MSH5-201ENST00000375703 LINC00167Q96N53 147 aa9.93□□□□□ -0.82
MSH5-201ENST00000375703 GCN1Q92616 2671 aaKnown RBP9.93□□□□□ -0.82
MSH5-201ENST00000375703 CELA1Q9UNI1 258 aa9.92□□□□□ -0.82
MSH5-201ENST00000375703 IGKV3D-7A0A0C4DH55 119 aa9.91□□□□□ -0.82
MSH5-201ENST00000375703 C3orf22Q8N5N4 141 aa9.91□□□□□ -0.82
MSH5-201ENST00000375703 TMEM256-PLSCR3K7ERE1 68 aa9.91□□□□□ -0.82
MSH5-201ENST00000375703 CCKP06307 115 aa9.91□□□□□ -0.82
MSH5-201ENST00000375703 HTN3P15516 51 aa9.91□□□□□ -0.82
MSH5-201ENST00000375703 FAM19A5Q7Z5A7 132 aaPredicted RBP9.91□□□□□ -0.82
MSH5-201ENST00000375703 JMJD7-PLA2G4BH0Y9G9 81 aa9.9□□□□□ -0.82
MSH5-201ENST00000375703 S100A7L2Q5SY68 101 aa9.9□□□□□ -0.82
MSH5-201ENST00000375703 Q6JHZ5 121 aa9.9□□□□□ -0.82
MSH5-201ENST00000375703 UQCRQO14949 82 aa9.9□□□□□ -0.83
MSH5-201ENST00000375703 C6orf99Q4VX62 202 aa9.9□□□□□ -0.83
MSH5-201ENST00000375703 UNQ6190/PRO20217Q6UXQ8 127 aa9.9□□□□□ -0.83
MSH5-201ENST00000375703 C6orf223Q8N319 242 aa9.9□□□□□ -0.83
MSH5-201ENST00000375703 Q8NAQ8 132 aa9.9□□□□□ -0.83
MSH5-201ENST00000375703 Q8NDZ9 215 aa9.9□□□□□ -0.83
MSH5-201ENST00000375703 MIFP14174 115 aa9.89□□□□□ -0.83
MSH5-201ENST00000375703 C10orf25Q5T742 122 aa9.89□□□□□ -0.83
MSH5-201ENST00000375703 SPART-AS1P0CW21 52 aa9.89□□□□□ -0.83
MSH5-201ENST00000375703 C9orf153Q5TBE3 101 aa9.89□□□□□ -0.83
MSH5-201ENST00000375703 SPAG11BQ08648 103 aa9.88□□□□□ -0.83
MSH5-201ENST00000375703 LELP1Q5T871 98 aa9.88□□□□□ -0.83
MSH5-201ENST00000375703 LINC00526Q96FQ7 95 aa9.88□□□□□ -0.83
MSH5-201ENST00000375703 HIST1H4AP62805 103 aaKnown RBP9.88□□□□□ -0.83
MSH5-201ENST00000375703 KLK12Q9UKR0 248 aa9.87□□□□□ -0.83
MSH5-201ENST00000375703 CYSRT1A8MQ03 144 aa9.86□□□□□ -0.83
MSH5-201ENST00000375703 ATOX1O00244 68 aa9.86□□□□□ -0.83
MSH5-201ENST00000375703 COX7CP15954 63 aa9.86□□□□□ -0.83
MSH5-201ENST00000375703 INAFM1C9JVW0 142 aa9.85□□□□□ -0.83
MSH5-201ENST00000375703 LINC00575Q6W349 94 aa9.85□□□□□ -0.83
MSH5-201ENST00000375703 VWFP04275 2813 aa9.85□□□□□ -0.83
MSH5-201ENST00000375703 A0A0J9YWU9 116 aa9.84□□□□□ -0.83
MSH5-201ENST00000375703 IGHV4-30-4P0DP06 118 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms