RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 CDIP1Q9H305 208 aa12.2□□□□□ -0.46
ITGB4-201ENST00000200181 SMIM29Q86T20 159 aa12.19□□□□□ -0.46
ITGB4-201ENST00000200181 KIAA1549LQ6ZVL6 1849 aa12.19□□□□□ -0.46
ITGB4-201ENST00000200181 IGKV2D-30A0A075B6S6 120 aa12.19□□□□□ -0.46
ITGB4-201ENST00000200181 IGKV2-30P06310 120 aa12.19□□□□□ -0.46
ITGB4-201ENST00000200181 C4orf26Q17RF5 130 aa12.19□□□□□ -0.46
ITGB4-201ENST00000200181 IGLV1-51P01701 117 aa12.19□□□□□ -0.46
ITGB4-201ENST00000200181 SPAG11AQ6PDA7 123 aa12.19□□□□□ -0.46
ITGB4-201ENST00000200181 LINC01561Q8N1V8 128 aa12.18□□□□□ -0.46
ITGB4-201ENST00000200181 A0A1B0GUV1 79 aa12.18□□□□□ -0.46
ITGB4-201ENST00000200181 PRLHP81277 87 aa12.18□□□□□ -0.46
ITGB4-201ENST00000200181 Q6ZSN1 163 aa12.18□□□□□ -0.46
ITGB4-201ENST00000200181 PLXNB1O43157 2135 aa12.17□□□□□ -0.46
ITGB4-201ENST00000200181 A0A096LNJ9 63 aa12.17□□□□□ -0.46
ITGB4-201ENST00000200181 PLA2G2AP14555 144 aa12.17□□□□□ -0.46
ITGB4-201ENST00000200181 AVPP01185 164 aa12.16□□□□□ -0.46
ITGB4-201ENST00000200181 FSHBP01225 129 aa12.15□□□□□ -0.46
ITGB4-201ENST00000200181 Q6ZRU5 148 aa12.15□□□□□ -0.46
ITGB4-201ENST00000200181 LINC00337Q8N6G1 96 aa12.15□□□□□ -0.46
ITGB4-201ENST00000200181 DSCAMO60469 2012 aa12.15□□□□□ -0.47
ITGB4-201ENST00000200181 COX8CQ7Z4L0 72 aa12.14□□□□□ -0.47
ITGB4-201ENST00000200181 SMCR5Q8TEV8 140 aa12.14□□□□□ -0.47
ITGB4-201ENST00000200181 LYPD5Q6UWN5 251 aa12.14□□□□□ -0.47
ITGB4-201ENST00000200181 Q8N2B8 174 aa12.13□□□□□ -0.47
ITGB4-201ENST00000200181 ARHGAP32A7KAX9 2087 aa12.13□□□□□ -0.47
ITGB4-201ENST00000200181 ACYP2P14621 99 aa12.12□□□□□ -0.47
ITGB4-201ENST00000200181 PRRC2AP48634 2157 aaKnown RBP12.11□□□□□ -0.47
ITGB4-201ENST00000200181 ATRXP46100 2492 aa12.11□□□□□ -0.47
ITGB4-201ENST00000200181 C1orf134Q5TEV5 83 aa12.11□□□□□ -0.47
ITGB4-201ENST00000200181 KIAA0087Q14695 138 aa12.11□□□□□ -0.47
ITGB4-201ENST00000200181 C22orf24Q9Y442 160 aa12.11□□□□□ -0.47
ITGB4-201ENST00000200181 SPATA3Q8NHX4 192 aa12.1□□□□□ -0.47
ITGB4-201ENST00000200181 HCFC1P51610 2035 aa12.09□□□□□ -0.47
ITGB4-201ENST00000200181 TP53AIP1Q9HCN2 124 aa12.09□□□□□ -0.47
ITGB4-201ENST00000200181 PCDH15Q96QU1 1955 aa12.09□□□□□ -0.47
ITGB4-201ENST00000200181 SMR3AQ99954 134 aa12.07□□□□□ -0.48
ITGB4-201ENST00000200181 ZFHX2Q9C0A1 2572 aaPredicted RBP12.06□□□□□ -0.48
ITGB4-201ENST00000200181 C6orf48Q9UBA6 75 aa12.05□□□□□ -0.48
ITGB4-201ENST00000200181 PLA2G1BP04054 148 aaKnown RBP12.05□□□□□ -0.48
ITGB4-201ENST00000200181 ANKHD1Q8IWZ3 2542 aaKnown RBP12.04□□□□□ -0.48
ITGB4-201ENST00000200181 BCE1O60756 84 aa12.04□□□□□ -0.48
ITGB4-201ENST00000200181 VPREB1P12018 145 aa12.04□□□□□ -0.48
ITGB4-201ENST00000200181 CDSNQ15517 529 aa12.03□□□□□ -0.48
ITGB4-201ENST00000200181 C16orf95Q9H693 158 aa12.03□□□□□ -0.48
ITGB4-201ENST00000200181 SPINT4Q6UDR6 99 aa12.03□□□□□ -0.48
ITGB4-201ENST00000200181 ATG2AQ2TAZ0 1938 aa12.01□□□□□ -0.49
ITGB4-201ENST00000200181 IGLV5-39A0A0G2JS06 123 aa12.01□□□□□ -0.49
ITGB4-201ENST00000200181 ATP11AUNQ6ZP68 121 aa12.01□□□□□ -0.49
ITGB4-201ENST00000200181 EML5Q05BV3 1969 aa12.01□□□□□ -0.49
ITGB4-201ENST00000200181 SPACA4Q8TDM5 124 aa12□□□□□ -0.49
ITGB4-201ENST00000200181 C8orf87E5RJ46 101 aa11.99□□□□□ -0.49
ITGB4-201ENST00000200181 MOBPQ13875 183 aa11.99□□□□□ -0.49
ITGB4-201ENST00000200181 PCNX3Q9H6A9 2034 aa11.99□□□□□ -0.49
ITGB4-201ENST00000200181 SMCPP49901 116 aaPredicted RBP11.98□□□□□ -0.49
ITGB4-201ENST00000200181 CSPG4Q6UVK1 2322 aa11.98□□□□□ -0.49
ITGB4-201ENST00000200181 RPS28P62857 69 aaKnown RBP11.98□□□□□ -0.49
ITGB4-201ENST00000200181 H3BPC8 53 aa11.96□□□□□ -0.49
ITGB4-201ENST00000200181 TECTAO75443 2155 aa11.96□□□□□ -0.49
ITGB4-201ENST00000200181 IGLV8-61A0A075B6I0 122 aa11.96□□□□□ -0.49
ITGB4-201ENST00000200181 SPG11Q96JI7 2443 aa11.96□□□□□ -0.5
ITGB4-201ENST00000200181 LINC00167Q96N53 147 aa11.96□□□□□ -0.5
ITGB4-201ENST00000200181 LINC01546A6NGU7 62 aa11.95□□□□□ -0.5
ITGB4-201ENST00000200181 KRTAP10-9P60411 292 aa11.95□□□□□ -0.5
ITGB4-201ENST00000200181 KIF25-AS1Q9Y6Z4 181 aa11.95□□□□□ -0.5
ITGB4-201ENST00000200181 C11orf72Q8NBR9 251 aa11.94□□□□□ -0.5
ITGB4-201ENST00000200181 A0A1B0GW54 56 aa11.94□□□□□ -0.5
ITGB4-201ENST00000200181 MUC6Q6W4X9 2439 aa11.93□□□□□ -0.5
ITGB4-201ENST00000200181 FAM218AQ96MZ4 157 aa11.92□□□□□ -0.5
ITGB4-201ENST00000200181 SONP18583 2426 aaKnown RBP11.92□□□□□ -0.5
ITGB4-201ENST00000200181 IGHV3OR16-9A0A0B4J2B5 98 aa11.92□□□□□ -0.5
ITGB4-201ENST00000200181 ELOF1P60002 83 aaKnown RBP11.91□□□□□ -0.5
ITGB4-201ENST00000200181 Q6ZQT0 140 aa11.91□□□□□ -0.5
ITGB4-201ENST00000200181 LTBP2Q14767 1821 aa11.91□□□□□ -0.5
ITGB4-201ENST00000200181 OTOGLQ3ZCN5 2332 aa11.9□□□□□ -0.5
ITGB4-201ENST00000200181 ACACBO00763 2458 aa11.9□□□□□ -0.5
ITGB4-201ENST00000200181 TRAV22A0A0B4J277 110 aa11.89□□□□□ -0.51
ITGB4-201ENST00000200181 LOC110117498A0A087WWA1 95 aa11.88□□□□□ -0.51
ITGB4-201ENST00000200181 LINC00476Q8WZB0 136 aa11.88□□□□□ -0.51
ITGB4-201ENST00000200181 TM2D3Q9BRN9 247 aa11.88□□□□□ -0.51
ITGB4-201ENST00000200181 LINC00313P59037 77 aa11.88□□□□□ -0.51
ITGB4-201ENST00000200181 FHL3Q13643 280 aa11.87□□□□□ -0.51
ITGB4-201ENST00000200181 Q8NBF4 154 aa11.87□□□□□ -0.51
ITGB4-201ENST00000200181 PRO0461Q9UI25 63 aa11.87□□□□□ -0.51
ITGB4-201ENST00000200181 NOTCH2Q04721 2471 aa11.85□□□□□ -0.51
ITGB4-201ENST00000200181 EXPH5Q8NEV8 1989 aa11.85□□□□□ -0.51
ITGB4-201ENST00000200181 PTPN13Q12923 2485 aa11.84□□□□□ -0.51
ITGB4-201ENST00000200181 SSBP3-AS1Q7Z2R9 100 aa11.84□□□□□ -0.51
ITGB4-201ENST00000200181 NHLRC4P0CG21 123 aaPredicted RBP11.83□□□□□ -0.52
ITGB4-201ENST00000200181 MDFIQ99750 246 aa11.83□□□□□ -0.52
ITGB4-201ENST00000200181 RAI1Q7Z5J4 1906 aaPredicted RBP11.83□□□□□ -0.52
ITGB4-201ENST00000200181 Q6ZRX8 168 aa11.82□□□□□ -0.52
ITGB4-201ENST00000200181 HIVEP3Q5T1R4 2406 aa11.82□□□□□ -0.52
ITGB4-201ENST00000200181 IGLV5-45A0A087WSX0 123 aa11.82□□□□□ -0.52
ITGB4-201ENST00000200181 RPL37AP61513 92 aaKnown RBP11.82□□□□□ -0.52
ITGB4-201ENST00000200181 AGRNO00468 2067 aa11.81□□□□□ -0.52
ITGB4-201ENST00000200181 C2CD3Q4AC94 2353 aa11.81□□□□□ -0.52
ITGB4-201ENST00000200181 PHF5AQ7RTV0 110 aaKnown RBP11.81□□□□□ -0.52
ITGB4-201ENST00000200181 LINC00315P59091 139 aa11.81□□□□□ -0.52
ITGB4-201ENST00000200181 NAV3Q8IVL0 2385 aa11.8□□□□□ -0.52
ITGB4-201ENST00000200181 A0A1W2PPR1 153 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms