RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 CHCHD1Q96BP2 118 aaKnown RBP14.03□□□□□ -0.16
R3HDM4-206ENST00000590454 J3QL48 77 aa14.02□□□□□ -0.17
R3HDM4-206ENST00000590454 NUPR1O60356 82 aa14.02□□□□□ -0.17
R3HDM4-206ENST00000590454 HBDP02042 147 aa14.02□□□□□ -0.17
R3HDM4-206ENST00000590454 PRSS1P07477 247 aa14.02□□□□□ -0.17
R3HDM4-206ENST00000590454 PDZD11Q5EBL8 140 aa14.02□□□□□ -0.17
R3HDM4-206ENST00000590454 CD164L2Q6UWJ8 174 aa14.02□□□□□ -0.17
R3HDM4-206ENST00000590454 C15orf56Q8N910 161 aa14.02□□□□□ -0.17
R3HDM4-206ENST00000590454 VCX2Q9H322 139 aa14.02□□□□□ -0.17
R3HDM4-206ENST00000590454 MYCBP2O75592 4640 aa14.01□□□□□ -0.17
R3HDM4-206ENST00000590454 SERF1AO75920 110 aa14.01□□□□□ -0.17
R3HDM4-206ENST00000590454 NPSP0C0P6 89 aa14.01□□□□□ -0.17
R3HDM4-206ENST00000590454 Q6ZN92 141 aa14.01□□□□□ -0.17
R3HDM4-206ENST00000590454 HIST1H2BKO60814 126 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 HIST1H2BJP06899 126 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 HIST1H2BOP23527 126 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 HIST1H2BBP33778 126 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 UBE2D1P51668 147 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 HIST1H2BDP58876 126 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 HIST1H2BCP62807 126 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 COX6A2Q02221 97 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 HIST2H2BEQ16778 126 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 HIST2H2BFQ5QNW6 126 aaPredicted RBP14□□□□□ -0.17
R3HDM4-206ENST00000590454 FAM19A2Q8N3H0 131 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 NTN5Q8WTR8 489 aaPredicted RBP14□□□□□ -0.17
R3HDM4-206ENST00000590454 HIST1H2BHQ93079 126 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 HIST1H2BNQ99877 126 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 HIST1H2BMQ99879 126 aa14□□□□□ -0.17
R3HDM4-206ENST00000590454 LINC00242Q5T6M2 205 aa13.99□□□□□ -0.17
R3HDM4-206ENST00000590454 C5orf38Q86SI9 138 aa13.99□□□□□ -0.17
R3HDM4-206ENST00000590454 C2orf88Q9BSF0 95 aa13.98□□□□□ -0.17
R3HDM4-206ENST00000590454 FLG2Q5D862 2391 aaPredicted RBP13.97□□□□□ -0.17
R3HDM4-206ENST00000590454 VPS13BQ7Z7G8 4022 aa13.97□□□□□ -0.17
R3HDM4-206ENST00000590454 IGLV5-52A0A0A0MRZ9 124 aa13.97□□□□□ -0.17
R3HDM4-206ENST00000590454 LINC01549A6NIU2 74 aa13.97□□□□□ -0.17
R3HDM4-206ENST00000590454 HIGD2BQ4VC39 106 aa13.97□□□□□ -0.17
R3HDM4-206ENST00000590454 IGHV3OR16-9A0A0B4J2B5 98 aa13.96□□□□□ -0.17
R3HDM4-206ENST00000590454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.96□□□□□ -0.17
R3HDM4-206ENST00000590454 HSBP1O75506 76 aa13.96□□□□□ -0.17
R3HDM4-206ENST00000590454 GCSHP23434 173 aa13.96□□□□□ -0.17
R3HDM4-206ENST00000590454 C14orf177Q52M58 125 aa13.96□□□□□ -0.17
R3HDM4-206ENST00000590454 CST9LQ9H4G1 147 aa13.96□□□□□ -0.17
R3HDM4-206ENST00000590454 hDV102S1A0JD36 115 aa13.95□□□□□ -0.18
R3HDM4-206ENST00000590454 COX7A2LO14548 114 aa13.95□□□□□ -0.18
R3HDM4-206ENST00000590454 LINC01620Q4KN68 170 aa13.95□□□□□ -0.18
R3HDM4-206ENST00000590454 PAPPA-AS1Q5QFB9 102 aa13.95□□□□□ -0.18
R3HDM4-206ENST00000590454 A0A0J9YXV3 536 aa13.94□□□□□ -0.18
R3HDM4-206ENST00000590454 SLPIP03973 132 aa13.94□□□□□ -0.18
R3HDM4-206ENST00000590454 LINC00526Q96FQ7 95 aa13.94□□□□□ -0.18
R3HDM4-206ENST00000590454 FAM19A3Q7Z5A8 133 aa13.93□□□□□ -0.18
R3HDM4-206ENST00000590454 PMVKQ15126 192 aa13.92□□□□□ -0.18
R3HDM4-206ENST00000590454 CFAP161Q6P656 301 aa13.92□□□□□ -0.18
R3HDM4-206ENST00000590454 GVQW2A0A096LPI5 108 aaPredicted RBP13.91□□□□□ -0.18
R3HDM4-206ENST00000590454 IGHV1-58A0A0C4DH39 117 aa13.91□□□□□ -0.18
R3HDM4-206ENST00000590454 MALP21145 153 aa13.91□□□□□ -0.18
R3HDM4-206ENST00000590454 NDUFA6P56556 154 aa13.91□□□□□ -0.18
R3HDM4-206ENST00000590454 ATP5LO75964 103 aa13.9□□□□□ -0.18
R3HDM4-206ENST00000590454 SRRM2Q9UQ35 2752 aaKnown RBP13.9□□□□□ -0.18
R3HDM4-206ENST00000590454 HAMPP81172 84 aa13.89□□□□□ -0.19
R3HDM4-206ENST00000590454 A0A087WZ39 114 aa13.88□□□□□ -0.19
R3HDM4-206ENST00000590454 IFI27L1Q96BM0 104 aa13.88□□□□□ -0.19
R3HDM4-206ENST00000590454 CDKN2A-AS1Q9UH64 79 aa13.87□□□□□ -0.19
R3HDM4-206ENST00000590454 IGHV3-64A0A075B6Q5 118 aa13.86□□□□□ -0.19
R3HDM4-206ENST00000590454 CNBPP62633 177 aaKnown RBP13.86□□□□□ -0.19
R3HDM4-206ENST00000590454 IGLV4-69A0A075B6H9 119 aa13.85□□□□□ -0.19
R3HDM4-206ENST00000590454 TINCRA0A1B0GVN0 87 aa13.85□□□□□ -0.19
R3HDM4-206ENST00000590454 KRTAP29-1A8MX34 341 aaPredicted RBP13.85□□□□□ -0.19
R3HDM4-206ENST00000590454 FABP4P15090 132 aa13.85□□□□□ -0.19
R3HDM4-206ENST00000590454 HERVK_113P63121 156 aa13.85□□□□□ -0.19
R3HDM4-206ENST00000590454 ORAOV1Q8WV07 137 aa13.85□□□□□ -0.19
R3HDM4-206ENST00000590454 GEMIN7Q9H840 131 aaKnown RBP13.85□□□□□ -0.19
R3HDM4-206ENST00000590454 LEPROTL1O95214 131 aa13.84□□□□□ -0.19
R3HDM4-206ENST00000590454 APOMO95445 188 aa13.83□□□□□ -0.2
R3HDM4-206ENST00000590454 IGLC3P0DOY3 106 aa13.83□□□□□ -0.2
R3HDM4-206ENST00000590454 SEC11AP67812 179 aa13.83□□□□□ -0.2
R3HDM4-206ENST00000590454 SPAG11BQ08648 103 aa13.83□□□□□ -0.2
R3HDM4-206ENST00000590454 COA6Q5JTJ3 125 aaKnown RBP13.83□□□□□ -0.2
R3HDM4-206ENST00000590454 SERTAD4-AS1Q5TG53 156 aa13.83□□□□□ -0.2
R3HDM4-206ENST00000590454 LINC00469Q8N7U9 141 aa13.83□□□□□ -0.2
R3HDM4-206ENST00000590454 IGLV5-45A0A087WSX0 123 aa13.82□□□□□ -0.2
R3HDM4-206ENST00000590454 ZNF561-AS1K7EIQ3 104 aa13.82□□□□□ -0.2
R3HDM4-206ENST00000590454 C9orf163Q8N9P6 203 aa13.82□□□□□ -0.2
R3HDM4-206ENST00000590454 FAM30AQ9NZY2 134 aa13.82□□□□□ -0.2
R3HDM4-206ENST00000590454 OR10D4PQ8NGN7 298 aa13.81□□□□□ -0.2
R3HDM4-206ENST00000590454 CHAC1Q9BUX1 264 aa13.81□□□□□ -0.2
R3HDM4-206ENST00000590454 DNAH8Q96JB1 4490 aa13.81□□□□□ -0.2
R3HDM4-206ENST00000590454 H0Y8G0 127 aa13.8□□□□□ -0.2
R3HDM4-206ENST00000590454 PLA2G1BP04054 148 aaKnown RBP13.8□□□□□ -0.2
R3HDM4-206ENST00000590454 KIAA0087Q14695 138 aa13.8□□□□□ -0.2
R3HDM4-206ENST00000590454 LINC01561Q8N1V8 128 aa13.8□□□□□ -0.2
R3HDM4-206ENST00000590454 CHTOPQ9Y3Y2 248 aaKnown RBP13.8□□□□□ -0.2
R3HDM4-206ENST00000590454 TRAV12-1A0A0B4J245 112 aa13.79□□□□□ -0.2
R3HDM4-206ENST00000590454 C11orf86A6NJI1 115 aa13.79□□□□□ -0.2
R3HDM4-206ENST00000590454 SMIM1B2RUZ4 78 aa13.78□□□□□ -0.2
R3HDM4-206ENST00000590454 SPINK8P0C7L1 97 aa13.78□□□□□ -0.2
R3HDM4-206ENST00000590454 ZNF22P17026 224 aaPredicted RBP13.78□□□□□ -0.2
R3HDM4-206ENST00000590454 SYCNQ0VAF6 134 aa13.78□□□□□ -0.2
R3HDM4-206ENST00000590454 SDIM1Q6ZPB5 146 aa13.78□□□□□ -0.2
R3HDM4-206ENST00000590454 Q6ZRU5 148 aa13.78□□□□□ -0.2
R3HDM4-206ENST00000590454 MRPL35Q9NZE8 188 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms