RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 TGIF2-C20orf24A0A0A6YYL0 155 aa8.66□□□□□ -1.02
SMARCD2-205ENST00000577686 IFITM10A6NMD0 228 aa8.66□□□□□ -1.02
SMARCD2-205ENST00000577686 TLX1NBP0CAT3 122 aa8.66□□□□□ -1.02
SMARCD2-205ENST00000577686 CKS2P33552 79 aa8.66□□□□□ -1.02
SMARCD2-205ENST00000577686 RPL13AP40429 203 aaKnown RBP8.66□□□□□ -1.02
SMARCD2-205ENST00000577686 UBE2BP63146 152 aa8.66□□□□□ -1.02
SMARCD2-205ENST00000577686 FAM74A3Q4VXF1 159 aa8.65□□□□□ -1.02
SMARCD2-205ENST00000577686 FAM104BQ5XKR9 115 aa8.65□□□□□ -1.02
SMARCD2-205ENST00000577686 PRR26Q8N8Z3 221 aa8.65□□□□□ -1.02
SMARCD2-205ENST00000577686 F8W036 122 aa8.64□□□□□ -1.03
SMARCD2-205ENST00000577686 MRPS36P82909 103 aaKnown RBP8.64□□□□□ -1.03
SMARCD2-205ENST00000577686 MRPL51Q4U2R6 128 aaKnown RBP8.64□□□□□ -1.03
SMARCD2-205ENST00000577686 FAM19A5Q7Z5A7 132 aaPredicted RBP8.64□□□□□ -1.03
SMARCD2-205ENST00000577686 V9GYV3 84 aa8.64□□□□□ -1.03
SMARCD2-205ENST00000577686 RNF213Q63HN8 5207 aa8.63□□□□□ -1.03
SMARCD2-205ENST00000577686 TRBV24-1A0A075B6N3 115 aa8.63□□□□□ -1.03
SMARCD2-205ENST00000577686 A0A0U1RQV1 116 aa8.63□□□□□ -1.03
SMARCD2-205ENST00000577686 PACRGQ96M98 296 aaPredicted RBP8.63□□□□□ -1.03
SMARCD2-205ENST00000577686 SMIM2Q9BVW6 85 aa8.63□□□□□ -1.03
SMARCD2-205ENST00000577686 IGHV3OR16-9A0A0B4J2B5 98 aa8.62□□□□□ -1.03
SMARCD2-205ENST00000577686 M0QXV9 152 aa8.62□□□□□ -1.03
SMARCD2-205ENST00000577686 IFI27P40305 119 aaPredicted RBP8.62□□□□□ -1.03
SMARCD2-205ENST00000577686 GAGE2EQ4V326 116 aa8.62□□□□□ -1.03
SMARCD2-205ENST00000577686 AKAP14Q86UN6 197 aa8.62□□□□□ -1.03
SMARCD2-205ENST00000577686 SMDT1Q9H4I9 107 aa8.62□□□□□ -1.03
SMARCD2-205ENST00000577686 GAGE2DQ9UEU5 116 aa8.62□□□□□ -1.03
SMARCD2-205ENST00000577686 TRBV30A0A0K0K1B3 111 aa8.61□□□□□ -1.03
SMARCD2-205ENST00000577686 TNFRSF6BO95407 300 aa8.61□□□□□ -1.03
SMARCD2-205ENST00000577686 PPBPP02775 128 aa8.61□□□□□ -1.03
SMARCD2-205ENST00000577686 SRP19P09132 144 aaKnown RBP8.61□□□□□ -1.03
SMARCD2-205ENST00000577686 RAB5AP20339 215 aa8.61□□□□□ -1.03
SMARCD2-205ENST00000577686 RPL39P62891 51 aaKnown RBP8.61□□□□□ -1.03
SMARCD2-205ENST00000577686 ADIRFQ15847 76 aa8.6□□□□□ -1.03
SMARCD2-205ENST00000577686 UNQ6190/PRO20217Q6UXQ8 127 aa8.6□□□□□ -1.03
SMARCD2-205ENST00000577686 C6orf48Q9UBA6 75 aa8.6□□□□□ -1.03
SMARCD2-205ENST00000577686 PRR4Q16378 134 aa8.59□□□□□ -1.03
SMARCD2-205ENST00000577686 NAT8Q9UHE5 227 aa8.59□□□□□ -1.03
SMARCD2-205ENST00000577686 CARHSP1Q9Y2V2 147 aaKnown RBP8.59□□□□□ -1.03
SMARCD2-205ENST00000577686 SMIM27A0A1W2PRY6 76 aa8.58□□□□□ -1.04
SMARCD2-205ENST00000577686 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
SMARCD2-205ENST00000577686 D6R8Y8 96 aa8.58□□□□□ -1.04
SMARCD2-205ENST00000577686 NDUFC2-KCTD14E9PQ53 114 aa8.58□□□□□ -1.04
SMARCD2-205ENST00000577686 PRSS2P07478 247 aa8.58□□□□□ -1.04
SMARCD2-205ENST00000577686 RPL23P62829 140 aaKnown RBP8.58□□□□□ -1.04
SMARCD2-205ENST00000577686 C10orf25Q5T742 122 aa8.58□□□□□ -1.04
SMARCD2-205ENST00000577686 C2orf88Q9BSF0 95 aa8.58□□□□□ -1.04
SMARCD2-205ENST00000577686 Q6ZN92 141 aa8.57□□□□□ -1.04
SMARCD2-205ENST00000577686 LINC01561Q8N1V8 128 aa8.57□□□□□ -1.04
SMARCD2-205ENST00000577686 NUPR1O60356 82 aa8.56□□□□□ -1.04
SMARCD2-205ENST00000577686 LBHQ53QV2 105 aaPredicted RBP8.56□□□□□ -1.04
SMARCD2-205ENST00000577686 TEX43Q6ZNM6 134 aa8.56□□□□□ -1.04
SMARCD2-205ENST00000577686 ORMDL3Q8N138 153 aa8.56□□□□□ -1.04
SMARCD2-205ENST00000577686 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
SMARCD2-205ENST00000577686 NPYP01303 97 aa8.55□□□□□ -1.04
SMARCD2-205ENST00000577686 CKS1BP61024 79 aa8.55□□□□□ -1.04
SMARCD2-205ENST00000577686 TMEM141Q96I45 108 aa8.55□□□□□ -1.04
SMARCD2-205ENST00000577686 PEA15Q15121 130 aa8.54□□□□□ -1.04
SMARCD2-205ENST00000577686 MRPL54Q6P161 138 aaKnown RBP8.54□□□□□ -1.04
SMARCD2-205ENST00000577686 ZNF861PO60384 105 aa8.53□□□□□ -1.04
SMARCD2-205ENST00000577686 KRTAP1-4P0C5Y4 121 aa8.53□□□□□ -1.04
SMARCD2-205ENST00000577686 KIAA0087Q14695 138 aa8.53□□□□□ -1.04
SMARCD2-205ENST00000577686 LINC00242Q5T6M2 205 aa8.53□□□□□ -1.04
SMARCD2-205ENST00000577686 IGLV4-3A0A075B6K6 122 aa8.52□□□□□ -1.05
SMARCD2-205ENST00000577686 TMEM136Q6ZRR5 245 aa8.52□□□□□ -1.05
SMARCD2-205ENST00000577686 ATP5L2Q7Z4Y8 100 aa8.52□□□□□ -1.05
SMARCD2-205ENST00000577686 KRTAP11-1Q8IUC1 163 aa8.52□□□□□ -1.05
SMARCD2-205ENST00000577686 FAM104AQ969W3 186 aa8.52□□□□□ -1.05
SMARCD2-205ENST00000577686 PRELID3AQ96N28 172 aa8.52□□□□□ -1.05
SMARCD2-205ENST00000577686 LAMTOR2Q9Y2Q5 125 aa8.52□□□□□ -1.05
SMARCD2-205ENST00000577686 SEC11AP67812 179 aa8.51□□□□□ -1.05
SMARCD2-205ENST00000577686 C6orf226Q5I0X4 101 aa8.51□□□□□ -1.05
SMARCD2-205ENST00000577686 C2orf82Q6UX34 121 aa8.51□□□□□ -1.05
SMARCD2-205ENST00000577686 MAP1LC3AQ9H492 121 aa8.51□□□□□ -1.05
SMARCD2-205ENST00000577686 TOMM7Q9P0U1 55 aa8.51□□□□□ -1.05
SMARCD2-205ENST00000577686 CYSLTR1Q9Y271 337 aa8.51□□□□□ -1.05
SMARCD2-205ENST00000577686 A0A1B0GXF2 115 aa8.5□□□□□ -1.05
SMARCD2-205ENST00000577686 NPSP0C0P6 89 aa8.5□□□□□ -1.05
SMARCD2-205ENST00000577686 RPL28P46779 137 aaKnown RBP8.5□□□□□ -1.05
SMARCD2-205ENST00000577686 PAPPA-AS1Q5QFB9 102 aa8.5□□□□□ -1.05
SMARCD2-205ENST00000577686 C9orf129Q5T035 196 aaKnown RBP8.5□□□□□ -1.05
SMARCD2-205ENST00000577686 VCX2Q9H322 139 aa8.5□□□□□ -1.05
SMARCD2-205ENST00000577686 G0S2P27469 103 aa8.49□□□□□ -1.05
SMARCD2-205ENST00000577686 Q8IZM0 81 aa8.49□□□□□ -1.05
SMARCD2-205ENST00000577686 CXCL5P42830 114 aa8.48□□□□□ -1.05
SMARCD2-205ENST00000577686 ORMDL2Q53FV1 153 aa8.48□□□□□ -1.05
SMARCD2-205ENST00000577686 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
SMARCD2-205ENST00000577686 ALKBH7Q9BT30 221 aaPredicted RBP8.48□□□□□ -1.05
SMARCD2-205ENST00000577686 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
SMARCD2-205ENST00000577686 hCG_2014768A0A024R1R8 64 aa8.47□□□□□ -1.05
SMARCD2-205ENST00000577686 K7EMI3 77 aa8.47□□□□□ -1.05
SMARCD2-205ENST00000577686 CRYGAP11844 174 aa8.47□□□□□ -1.05
SMARCD2-205ENST00000577686 HERVK_113P63121 156 aa8.47□□□□□ -1.05
SMARCD2-205ENST00000577686 C2orf66Q6UXQ4 117 aa8.47□□□□□ -1.05
SMARCD2-205ENST00000577686 CTDSP1Q9GZU7 261 aa8.47□□□□□ -1.05
SMARCD2-205ENST00000577686 C22orf24Q9Y442 160 aa8.47□□□□□ -1.05
SMARCD2-205ENST00000577686 PRSS47A8MTI9 375 aa8.46□□□□□ -1.06
SMARCD2-205ENST00000577686 GEMIN7Q9H840 131 aaKnown RBP8.46□□□□□ -1.06
SMARCD2-205ENST00000577686 LOC389332A0A1B0GUA5 103 aa8.45□□□□□ -1.06
SMARCD2-205ENST00000577686 F8VRH5 84 aa8.45□□□□□ -1.06
SMARCD2-205ENST00000577686 BCE1O60756 84 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms