RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 RPL13AP40429 203 aaKnown RBP3.61□□□□□ -1.83
ZEB1-211ENST00000558440 CENPWQ5EE01 88 aa3.61□□□□□ -1.83
ZEB1-211ENST00000558440 Q75L30 129 aa3.61□□□□□ -1.83
ZEB1-211ENST00000558440 KCNRGQ8N5I3 272 aa3.61□□□□□ -1.83
ZEB1-211ENST00000558440 GATD1Q8NB37 220 aa3.61□□□□□ -1.83
ZEB1-211ENST00000558440 FAM213BQ8TBF2 198 aa3.61□□□□□ -1.83
ZEB1-211ENST00000558440 TSKUQ8WUA8 353 aa3.61□□□□□ -1.83
ZEB1-211ENST00000558440 CAMK2N2Q96S95 79 aa3.61□□□□□ -1.83
ZEB1-211ENST00000558440 MUC17Q685J3 4493 aa3.61□□□□□ -1.83
ZEB1-211ENST00000558440 C19orf71A6NCJ1 209 aa3.6□□□□□ -1.83
ZEB1-211ENST00000558440 SDHAF1A6NFY7 115 aa3.6□□□□□ -1.83
ZEB1-211ENST00000558440 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.6□□□□□ -1.83
ZEB1-211ENST00000558440 COX7A2LO14548 114 aa3.6□□□□□ -1.83
ZEB1-211ENST00000558440 PMCHP20382 165 aa3.6□□□□□ -1.83
ZEB1-211ENST00000558440 MEF2BQ02080 365 aaPredicted RBP3.6□□□□□ -1.83
ZEB1-211ENST00000558440 TEX261Q6UWH6 196 aa3.6□□□□□ -1.83
ZEB1-211ENST00000558440 SMIM15Q7Z3B0 74 aa3.6□□□□□ -1.83
ZEB1-211ENST00000558440 NUP35Q8NFH5 326 aa3.6□□□□□ -1.83
ZEB1-211ENST00000558440 MBD3L1Q8WWY6 194 aa3.6□□□□□ -1.83
ZEB1-211ENST00000558440 RPL39LQ96EH5 51 aaKnown RBP3.6□□□□□ -1.83
ZEB1-211ENST00000558440 MRAP2Q96G30 205 aa3.6□□□□□ -1.83
ZEB1-211ENST00000558440 OPRPNQ99935 248 aaPredicted RBP3.6□□□□□ -1.83
ZEB1-211ENST00000558440 FSIP2Q5CZC0 6907 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 A0A087X002 238 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 UMAD1C9J7I0 102 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 I3L3M4 83 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 ARPC5O15511 151 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 BCL2L11O43521 198 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 CTRLP40313 264 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 GNG4P50150 75 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 C9orf62Q8N4C0 152 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 SMIM12Q96EX1 92 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 C2orf48Q96LS8 159 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 BIN3Q9NQY0 253 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 CYTL1Q9NRR1 136 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 CDC42SE2Q9NRR3 84 aa3.59□□□□□ -1.83
ZEB1-211ENST00000558440 RAB19A4D1S5 217 aa3.58□□□□□ -1.84
ZEB1-211ENST00000558440 C1orf196B1AJZ1 125 aa3.58□□□□□ -1.84
ZEB1-211ENST00000558440 KRTAP1-4P0C5Y4 121 aa3.58□□□□□ -1.84
ZEB1-211ENST00000558440 UBE2BP63146 152 aa3.58□□□□□ -1.84
ZEB1-211ENST00000558440 FAM19A5Q7Z5A7 132 aaPredicted RBP3.58□□□□□ -1.84
ZEB1-211ENST00000558440 MRPL52Q86TS9 123 aaKnown RBP3.58□□□□□ -1.84
ZEB1-211ENST00000558440 C11orf52Q96A22 123 aa3.58□□□□□ -1.84
ZEB1-211ENST00000558440 CNFNQ9BYD5 112 aa3.58□□□□□ -1.84
ZEB1-211ENST00000558440 MANBALQ9NQG1 85 aa3.58□□□□□ -1.84
ZEB1-211ENST00000558440 GNG13Q9P2W3 67 aa3.58□□□□□ -1.84
ZEB1-211ENST00000558440 FAM168BA1KXE4 195 aa3.57□□□□□ -1.84
ZEB1-211ENST00000558440 C7orf77A4D0Y5 90 aa3.57□□□□□ -1.84
ZEB1-211ENST00000558440 TSPAN13O95857 204 aa3.57□□□□□ -1.84
ZEB1-211ENST00000558440 ESDP10768 282 aa3.57□□□□□ -1.84
ZEB1-211ENST00000558440 CCL20P78556 96 aa3.57□□□□□ -1.84
ZEB1-211ENST00000558440 SPAG11BQ08648 103 aa3.57□□□□□ -1.84
ZEB1-211ENST00000558440 SMAGPQ0VAQ4 97 aa3.57□□□□□ -1.84
ZEB1-211ENST00000558440 KIAA1644Q3SXP7 199 aa3.57□□□□□ -1.84
ZEB1-211ENST00000558440 FAM210AQ96ND0 272 aa3.57□□□□□ -1.84
ZEB1-211ENST00000558440 IMMP2LQ96T52 175 aa3.57□□□□□ -1.84
ZEB1-211ENST00000558440 ST20Q9HBF5 79 aa3.57□□□□□ -1.84
ZEB1-211ENST00000558440 TMEM242Q9NWH2 141 aa3.57□□□□□ -1.84
ZEB1-211ENST00000558440 CARHSP1Q9Y2V2 147 aaKnown RBP3.57□□□□□ -1.84
ZEB1-211ENST00000558440 TRAV13-1A0A0B4J241 112 aa3.56□□□□□ -1.84
ZEB1-211ENST00000558440 TRBV6-5A0A0K0K1A5 114 aa3.56□□□□□ -1.84
ZEB1-211ENST00000558440 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
ZEB1-211ENST00000558440 G3V3Q6 166 aa3.56□□□□□ -1.84
ZEB1-211ENST00000558440 NDUFA1O15239 70 aa3.56□□□□□ -1.84
ZEB1-211ENST00000558440 FOXA3P55318 350 aaPredicted RBP3.56□□□□□ -1.84
ZEB1-211ENST00000558440 C5orf38Q86SI9 138 aa3.56□□□□□ -1.84
ZEB1-211ENST00000558440 KRTAP11-1Q8IUC1 163 aa3.56□□□□□ -1.84
ZEB1-211ENST00000558440 OR10D4PQ8NGN7 298 aa3.56□□□□□ -1.84
ZEB1-211ENST00000558440 RPP21Q9H633 154 aaKnown RBP3.56□□□□□ -1.84
ZEB1-211ENST00000558440 MED9Q9NWA0 146 aa3.56□□□□□ -1.84
ZEB1-211ENST00000558440 MRPL35Q9NZE8 188 aaKnown RBP3.56□□□□□ -1.84
ZEB1-211ENST00000558440 F8WDY8 70 aa3.55□□□□□ -1.84
ZEB1-211ENST00000558440 TEX46H3BTG2 121 aa3.55□□□□□ -1.84
ZEB1-211ENST00000558440 M0QXV9 152 aa3.55□□□□□ -1.84
ZEB1-211ENST00000558440 PDE6DO43924 150 aa3.55□□□□□ -1.84
ZEB1-211ENST00000558440 FCER1GP30273 86 aa3.55□□□□□ -1.84
ZEB1-211ENST00000558440 GAGE2EQ4V326 116 aa3.55□□□□□ -1.84
ZEB1-211ENST00000558440 RNASE13Q5GAN3 156 aaKnown RBP3.55□□□□□ -1.84
ZEB1-211ENST00000558440 ORAOV1Q8WV07 137 aa3.55□□□□□ -1.84
ZEB1-211ENST00000558440 RNASE7Q9H1E1 156 aaKnown RBP3.55□□□□□ -1.84
ZEB1-211ENST00000558440 GAGE2DQ9UEU5 116 aa3.55□□□□□ -1.84
ZEB1-211ENST00000558440 TRBV20OR9-2A0A075B6H5 130 aa3.54□□□□□ -1.84
ZEB1-211ENST00000558440 TRBV27A0A0K0K1C4 114 aa3.54□□□□□ -1.84
ZEB1-211ENST00000558440 KANTRA0A1W2PQU2 76 aa3.54□□□□□ -1.84
ZEB1-211ENST00000558440 TLX1NBP0CAT3 122 aa3.54□□□□□ -1.84
ZEB1-211ENST00000558440 ZNF345Q14585 488 aa3.54□□□□□ -1.84
ZEB1-211ENST00000558440 TMEM241Q24JQ0 296 aa3.54□□□□□ -1.84
ZEB1-211ENST00000558440 BORCS7Q96B45 105 aa3.54□□□□□ -1.84
ZEB1-211ENST00000558440 UBE2D4Q9Y2X8 147 aa3.54□□□□□ -1.84
ZEB1-211ENST00000558440 CSDC2Q9Y534 153 aaKnown RBP3.54□□□□□ -1.84
ZEB1-211ENST00000558440 ZNF861PO60384 105 aa3.53□□□□□ -1.84
ZEB1-211ENST00000558440 POLR2KP53803 58 aaKnown RBP3.53□□□□□ -1.84
ZEB1-211ENST00000558440 DSCR10P59022 87 aa3.53□□□□□ -1.84
ZEB1-211ENST00000558440 SMDT1Q9H4I9 107 aa3.53□□□□□ -1.84
ZEB1-211ENST00000558440 C6orf48Q9UBA6 75 aa3.53□□□□□ -1.84
ZEB1-211ENST00000558440 PYGO1Q9Y3Y4 419 aa3.53□□□□□ -1.84
ZEB1-211ENST00000558440 A8MWL6 223 aa3.52□□□□□ -1.85
ZEB1-211ENST00000558440 SMLR1H3BR10 107 aa3.52□□□□□ -1.85
ZEB1-211ENST00000558440 K7EN84 100 aa3.52□□□□□ -1.85
ZEB1-211ENST00000558440 GATCO43716 136 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms