RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 TSHBP01222 138 aa4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 TRGC2P03986 189 aa4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 COTL1Q14019 142 aa4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 Q8N8P6 123 aa4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 KIR2DL4Q99706 377 aa4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 NXT2Q9NPJ8 142 aaKnown RBP4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 TRBV25-1A0A075B6N4 114 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 TRAV8-6A0A0B4J262 113 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 NBDYA0A0U1RRE5 68 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 LINC01546A6NGU7 62 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 H7C423 109 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 ESDP10768 282 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 C14orf177Q52M58 125 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 C18orf32Q8TCD1 76 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 IGLV5-45A0A087WSX0 123 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 LOC389332A0A1B0GUA5 103 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 K7EP13 123 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 SIVA1O15304 175 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 DNAH10OSP0CZ25 163 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 FCER1GP30273 86 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 IFI27P40305 119 aaPredicted RBP4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 PKIAP61925 76 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 RPL24P83731 157 aaKnown RBP4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 Q0VG73 95 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 NIT1Q86X76 327 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 WFDC10BQ8IUB3 73 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 TMEM243Q9BU79 118 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 CHCHD7Q9BUK0 85 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 Q9H8V8 135 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 LINC00614P0C842 121 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 ZNF25P17030 456 aaPredicted RBP4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 G0S2P27469 103 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 RAB5BP61020 215 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 LAGE3Q14657 143 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 ORMDL2Q53FV1 153 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 LINC01556Q5JQF7 62 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 C20orf203Q8NBC4 194 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 CHCHD5Q9BSY4 110 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 TRAV9-2A0A087WT02 112 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 A0A087WX48 190 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 LINC01549A6NIU2 74 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 C1orf196B1AJZ1 125 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 UBE2L6O14933 153 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BKO60814 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BJP06899 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BOP23527 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BBP33778 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BDP58876 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BCP62807 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 SMAGPQ0VAQ4 97 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST2H2BEQ16778 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 FA2HQ7L5A8 372 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 MRPL52Q86TS9 123 aaKnown RBP4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BHQ93079 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 CHCHD1Q96BP2 118 aaKnown RBP4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BNQ99877 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BMQ99879 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 TIMM21Q9BVV7 248 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 CSDC2Q9Y534 153 aaKnown RBP4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 IGKV2-29A2NJV5 120 aaPredicted RBP4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 TMEM262E9PQX1 116 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 FGF6P10767 208 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 RBX1P62877 108 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 MPV17L2Q567V2 206 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 TTC32Q5I0X7 151 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 BAGE3Q86Y29 109 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 C10orf126Q8N4M7 172 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 CYSLTR1Q9Y271 337 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 UBE2D4Q9Y2X8 147 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 PYGO1Q9Y3Y4 419 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 IBA57-AS1B1ANH7 110 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 SMIM1B2RUZ4 78 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 RPL39P62891 51 aaKnown RBP4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 MRPS36P82909 103 aaKnown RBP4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 COA6Q5JTJ3 125 aaKnown RBP4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 AMMECR1LQ6DCA0 310 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 RNASEKQ6P5S7 137 aaKnown RBP4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 C2orf66Q6UXQ4 117 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 Q8N976 141 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 TOMM6Q96B49 74 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 TMEM101Q96IK0 257 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 SPANXA1Q9NS26 97 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 PRR34Q9NV39 138 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 IGLV4-60A0A075B6I1 120 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 A0A096LNJ9 63 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 IGIPA6NJ69 53 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 HSBP1O75506 76 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 SERF1AO75920 110 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 IGHV3-30P01768 117 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 IGHV3-33P01772 117 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 HBDP02042 147 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 IGHV3-30-3P0DP02 117 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 IGHV3-30-5P0DP03 117 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 ZC2HC1BQ5TFG8 222 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms