RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 C20orf203Q8NBC4 194 aa12.11□□□□□ -0.47
LRP6-202ENST00000535731 NXT2Q9NPJ8 142 aaKnown RBP12.11□□□□□ -0.47
LRP6-202ENST00000535731 IFI27P40305 119 aaPredicted RBP12.1□□□□□ -0.47
LRP6-202ENST00000535731 A0A1B0GUV1 79 aa12.09□□□□□ -0.47
LRP6-202ENST00000535731 C18orf32Q8TCD1 76 aa12.09□□□□□ -0.47
LRP6-202ENST00000535731 ESDP10768 282 aa12.08□□□□□ -0.48
LRP6-202ENST00000535731 Q6ZRP5 223 aa12.08□□□□□ -0.48
LRP6-202ENST00000535731 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.07□□□□□ -0.48
LRP6-202ENST00000535731 IGKV2-29A2NJV5 120 aaPredicted RBP12.07□□□□□ -0.48
LRP6-202ENST00000535731 H7C423 109 aa12.07□□□□□ -0.48
LRP6-202ENST00000535731 K7EMI3 77 aa12.07□□□□□ -0.48
LRP6-202ENST00000535731 C15orf56Q8N910 161 aa12.07□□□□□ -0.48
LRP6-202ENST00000535731 IGLV4-60A0A075B6I1 120 aa12.06□□□□□ -0.48
LRP6-202ENST00000535731 FA2HQ7L5A8 372 aa12.06□□□□□ -0.48
LRP6-202ENST00000535731 KRTAP9-6A0A140TA67 174 aa12.05□□□□□ -0.48
LRP6-202ENST00000535731 ORMDL2Q53FV1 153 aa12.05□□□□□ -0.48
LRP6-202ENST00000535731 AMMECR1LQ6DCA0 310 aa12.05□□□□□ -0.48
LRP6-202ENST00000535731 TMEM18Q96B42 140 aa12.05□□□□□ -0.48
LRP6-202ENST00000535731 LINC00474Q9P2X8 69 aa12.05□□□□□ -0.48
LRP6-202ENST00000535731 A0A0U1RQV1 116 aa12.04□□□□□ -0.48
LRP6-202ENST00000535731 FGF6P10767 208 aa12.04□□□□□ -0.48
LRP6-202ENST00000535731 A0A096LNI7 61 aa12.03□□□□□ -0.48
LRP6-202ENST00000535731 RAB5BP61020 215 aa12.03□□□□□ -0.48
LRP6-202ENST00000535731 SMAGPQ0VAQ4 97 aa12.03□□□□□ -0.48
LRP6-202ENST00000535731 RNASEKQ6P5S7 137 aaKnown RBP12.03□□□□□ -0.48
LRP6-202ENST00000535731 GAGE12HA6NDE8 117 aa12.02□□□□□ -0.49
LRP6-202ENST00000535731 LINC01546A6NGU7 62 aa12.02□□□□□ -0.49
LRP6-202ENST00000535731 ZNF25P17030 456 aaPredicted RBP12.02□□□□□ -0.49
LRP6-202ENST00000535731 HIGD2BQ4VC39 106 aa12.02□□□□□ -0.49
LRP6-202ENST00000535731 LINC00614P0C842 121 aa12.01□□□□□ -0.49
LRP6-202ENST00000535731 G0S2P27469 103 aa12.01□□□□□ -0.49
LRP6-202ENST00000535731 RPL39P62891 51 aaKnown RBP12.01□□□□□ -0.49
LRP6-202ENST00000535731 MRPL52Q86TS9 123 aaKnown RBP12.01□□□□□ -0.49
LRP6-202ENST00000535731 TMEM101Q96IK0 257 aa12.01□□□□□ -0.49
LRP6-202ENST00000535731 BAGE3Q86Y29 109 aa12□□□□□ -0.49
LRP6-202ENST00000535731 OR5A1Q8NGJ0 315 aa12□□□□□ -0.49
LRP6-202ENST00000535731 URB1-AS1Q96HZ7 61 aa12□□□□□ -0.49
LRP6-202ENST00000535731 CYSLTR1Q9Y271 337 aa12□□□□□ -0.49
LRP6-202ENST00000535731 MUC2Q02817 5179 aa12□□□□□ -0.49
LRP6-202ENST00000535731 C2orf66Q6UXQ4 117 aa11.99□□□□□ -0.49
LRP6-202ENST00000535731 ZNF664Q8N3J9 261 aa11.99□□□□□ -0.49
LRP6-202ENST00000535731 TIMM21Q9BVV7 248 aa11.99□□□□□ -0.49
LRP6-202ENST00000535731 PKIGQ9Y2B9 76 aa11.99□□□□□ -0.49
LRP6-202ENST00000535731 UBE2D4Q9Y2X8 147 aa11.99□□□□□ -0.49
LRP6-202ENST00000535731 SPANXA1Q9NS26 97 aa11.98□□□□□ -0.49
LRP6-202ENST00000535731 PSORS1C2Q9UIG4 136 aa11.98□□□□□ -0.49
LRP6-202ENST00000535731 CSDC2Q9Y534 153 aaKnown RBP11.98□□□□□ -0.49
LRP6-202ENST00000535731 GVQW2A0A096LPI5 108 aaPredicted RBP11.97□□□□□ -0.49
LRP6-202ENST00000535731 HIST1H2BKO60814 126 aa11.97□□□□□ -0.49
LRP6-202ENST00000535731 HIST1H2BJP06899 126 aa11.97□□□□□ -0.49
LRP6-202ENST00000535731 HIST1H2BOP23527 126 aa11.97□□□□□ -0.49
LRP6-202ENST00000535731 HIST1H2BBP33778 126 aa11.97□□□□□ -0.49
LRP6-202ENST00000535731 HIST1H2BDP58876 126 aa11.97□□□□□ -0.49
LRP6-202ENST00000535731 HIST1H2BCP62807 126 aa11.97□□□□□ -0.49
LRP6-202ENST00000535731 HIST2H2BEQ16778 126 aa11.97□□□□□ -0.49
LRP6-202ENST00000535731 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.97□□□□□ -0.49
LRP6-202ENST00000535731 HIST1H2BHQ93079 126 aa11.97□□□□□ -0.49
LRP6-202ENST00000535731 CHCHD1Q96BP2 118 aaKnown RBP11.97□□□□□ -0.49
LRP6-202ENST00000535731 HIST1H2BNQ99877 126 aa11.97□□□□□ -0.49
LRP6-202ENST00000535731 HIST1H2BMQ99879 126 aa11.97□□□□□ -0.49
LRP6-202ENST00000535731 C1orf196B1AJZ1 125 aa11.96□□□□□ -0.49
LRP6-202ENST00000535731 LINC01549A6NIU2 74 aa11.95□□□□□ -0.5
LRP6-202ENST00000535731 TOMM6Q96B49 74 aa11.95□□□□□ -0.5
LRP6-202ENST00000535731 CDC42SE2Q9NRR3 84 aa11.95□□□□□ -0.5
LRP6-202ENST00000535731 PYGO1Q9Y3Y4 419 aa11.95□□□□□ -0.5
LRP6-202ENST00000535731 CHCHD10Q8WYQ3 142 aaPredicted RBP11.94□□□□□ -0.5
LRP6-202ENST00000535731 IGKV3OR2-268A0A0C4DH90 116 aa11.93□□□□□ -0.5
LRP6-202ENST00000535731 HSBP1O75506 76 aa11.93□□□□□ -0.5
LRP6-202ENST00000535731 SERF1AO75920 110 aa11.93□□□□□ -0.5
LRP6-202ENST00000535731 HBDP02042 147 aa11.93□□□□□ -0.5
LRP6-202ENST00000535731 PMCHL1Q16048 86 aa11.93□□□□□ -0.5
LRP6-202ENST00000535731 Q6ZUT4 128 aa11.93□□□□□ -0.5
LRP6-202ENST00000535731 MRPS36P82909 103 aaKnown RBP11.92□□□□□ -0.5
LRP6-202ENST00000535731 SCGB3A1Q96QR1 104 aa11.92□□□□□ -0.5
LRP6-202ENST00000535731 A0A096LNJ9 63 aa11.91□□□□□ -0.5
LRP6-202ENST00000535731 IGIPA6NJ69 53 aa11.91□□□□□ -0.5
LRP6-202ENST00000535731 RNASE13Q5GAN3 156 aaKnown RBP11.91□□□□□ -0.5
LRP6-202ENST00000535731 ERASQ7Z444 233 aa11.91□□□□□ -0.5
LRP6-202ENST00000535731 OPRPNQ99935 248 aaPredicted RBP11.91□□□□□ -0.5
LRP6-202ENST00000535731 IGLV4-3A0A075B6K6 122 aa11.9□□□□□ -0.5
LRP6-202ENST00000535731 NPSP0C0P6 89 aa11.9□□□□□ -0.5
LRP6-202ENST00000535731 LINC00310P59036 64 aa11.9□□□□□ -0.5
LRP6-202ENST00000535731 Q6ZN92 141 aa11.9□□□□□ -0.5
LRP6-202ENST00000535731 PRR26Q8N8Z3 221 aa11.9□□□□□ -0.5
LRP6-202ENST00000535731 TMEM141Q96I45 108 aa11.9□□□□□ -0.5
LRP6-202ENST00000535731 TIMM17AQ99595 171 aa11.9□□□□□ -0.5
LRP6-202ENST00000535731 PAPPA-AS1Q5QFB9 102 aa11.89□□□□□ -0.51
LRP6-202ENST00000535731 LCE2AQ5TA79 106 aaPredicted RBP11.89□□□□□ -0.51
LRP6-202ENST00000535731 FAM104AQ969W3 186 aa11.89□□□□□ -0.51
LRP6-202ENST00000535731 FAM19A2Q8N3H0 131 aa11.88□□□□□ -0.51
LRP6-202ENST00000535731 CARD19Q96LW7 228 aa11.88□□□□□ -0.51
LRP6-202ENST00000535731 NUPR1O60356 82 aa11.87□□□□□ -0.51
LRP6-202ENST00000535731 NDUFA6P56556 154 aa11.87□□□□□ -0.51
LRP6-202ENST00000535731 FOXI1Q12951 378 aa11.87□□□□□ -0.51
LRP6-202ENST00000535731 PDZD11Q5EBL8 140 aa11.87□□□□□ -0.51
LRP6-202ENST00000535731 TEX43Q6ZNM6 134 aa11.87□□□□□ -0.51
LRP6-202ENST00000535731 VCX2Q9H322 139 aa11.87□□□□□ -0.51
LRP6-202ENST00000535731 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
LRP6-202ENST00000535731 IFITM10A6NMD0 228 aa11.86□□□□□ -0.51
LRP6-202ENST00000535731 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms