RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 COMMD6Q7Z4G1 85 aa-0.74□□□□□ -2.53
RNU2-56P-201ENST00000516826 LINC00470Q9BZP3 86 aa-0.74□□□□□ -2.53
RNU2-56P-201ENST00000516826 DNAH6Q9C0G6 4158 aa-0.74□□□□□ -2.53
RNU2-56P-201ENST00000516826 MYOM1P52179 1685 aa-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 IGLC1P0CG04 106 aa-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 KLK9Q2XQG4 91 aa-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 KRTAP20-2Q3LI61 65 aa-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 C5orf38Q86SI9 138 aa-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 C8orf59Q8N0T1 100 aaPredicted RBP-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 MYOZ3Q8TDC0 251 aa-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 NXT2Q9NPJ8 142 aaKnown RBP-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 LINC00474Q9P2X8 69 aa-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 SMG6Q86US8 1419 aaKnown RBP-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 MAGI1Q96QZ7 1491 aaPredicted RBP-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 ARHGEF12Q9NZN5 1544 aa-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 SPEF2Q9C093 1822 aa-0.75□□□□□ -2.53
RNU2-56P-201ENST00000516826 MYH8P13535 1937 aa-0.76□□□□□ -2.53
RNU2-56P-201ENST00000516826 STARD9Q9P2P6 4700 aa-0.76□□□□□ -2.53
RNU2-56P-201ENST00000516826 PI4KAP42356 2102 aa-0.76□□□□□ -2.53
RNU2-56P-201ENST00000516826 USH2AO75445 5202 aa-0.76□□□□□ -2.53
RNU2-56P-201ENST00000516826 WHAMMP3Q1A5X7 153 aa-0.76□□□□□ -2.53
RNU2-56P-201ENST00000516826 ARL11Q969Q4 196 aa-0.76□□□□□ -2.53
RNU2-56P-201ENST00000516826 PKD1P98161 4303 aa-0.76□□□□□ -2.53
RNU2-56P-201ENST00000516826 HMGXB3Q12766 1538 aa-0.76□□□□□ -2.53
RNU2-56P-201ENST00000516826 DOCK2Q92608 1830 aa-0.76□□□□□ -2.53
RNU2-56P-201ENST00000516826 HTTP42858 3142 aa-0.77□□□□□ -2.53
RNU2-56P-201ENST00000516826 CNOT1A5YKK6 2376 aaKnown RBP-0.77□□□□□ -2.53
RNU2-56P-201ENST00000516826 KDM5AP29375 1690 aaKnown RBP-0.77□□□□□ -2.53
RNU2-56P-201ENST00000516826 MBD5Q9P267 1494 aa-0.77□□□□□ -2.53
RNU2-56P-201ENST00000516826 CHKB-CPT1BH3BT56 60 aa-0.77□□□□□ -2.53
RNU2-56P-201ENST00000516826 NDUFA2O43678 99 aa-0.77□□□□□ -2.53
RNU2-56P-201ENST00000516826 APOC2P02655 101 aa-0.77□□□□□ -2.53
RNU2-56P-201ENST00000516826 FGF7P21781 194 aa-0.77□□□□□ -2.53
RNU2-56P-201ENST00000516826 FAT3Q8TDW7 4589 aa-0.77□□□□□ -2.53
RNU2-56P-201ENST00000516826 KIAA0556O60303 1618 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 HERC2O95714 4834 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 ARHGEF5Q12774 1597 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 SETBP1Q9Y6X0 1596 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 PCNX1Q96RV3 2341 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 LOC100130705A0A1B0GUX0 176 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 GNG7O60262 68 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 COX8AP10176 69 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 MT4P47944 62 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 USMG5Q96IX5 58 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 FAM167A-AS1Q96KT0 104 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 LINC01600Q96MT4 127 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 FXYD6Q9H0Q3 95 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 TET3O43151 1660 aa-0.78□□□□□ -2.53
RNU2-56P-201ENST00000516826 SHROOM2Q13796 1616 aa-0.78□□□□□ -2.54
RNU2-56P-201ENST00000516826 MIF4GDA9UHW6 222 aaKnown RBP-0.79□□□□□ -2.54
RNU2-56P-201ENST00000516826 K7EP13 123 aa-0.79□□□□□ -2.54
RNU2-56P-201ENST00000516826 IFNGP01579 166 aa-0.79□□□□□ -2.54
RNU2-56P-201ENST00000516826 CATR1Q13166 79 aa-0.79□□□□□ -2.54
RNU2-56P-201ENST00000516826 FAIMQ9NVQ4 179 aa-0.79□□□□□ -2.54
RNU2-56P-201ENST00000516826 ARL2-SNX15V9GYD0 113 aa-0.79□□□□□ -2.54
RNU2-56P-201ENST00000516826 UBR4Q5T4S7 5183 aa-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 NAIPQ13075 1403 aa-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 TACC2O95359 2948 aa-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 OOSP1A8MZH6 123 aa-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 FAM25AB3EWG3 89 aa-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 FAM25CB3EWG5 89 aa-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 FAM25GB3EWG6 89 aa-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 UBA52P62987 128 aaKnown RBP-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 FAM223AQ8IWN6 122 aa-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 DPH3P1Q9H4G8 78 aa-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 LINC00846Q9NV44 126 aa-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 UQCR10Q9UDW1 63 aa-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 GOLGA4Q13439 2230 aaKnown RBP-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 CREBBPQ92793 2442 aa-0.8□□□□□ -2.54
RNU2-56P-201ENST00000516826 REV3LO60673 3130 aa-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 UBE2L5PA0A1B0GUS4 154 aa-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 CPSF4LA6NMK7 179 aaKnown RBP-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 UBE2L3P68036 154 aaKnown RBP-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 DEFB135Q30KP9 77 aa-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 APLNQ9ULZ1 77 aa-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 PSME4Q14997 1843 aa-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 AKAP9Q99996 3911 aa-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 A2ML1A8K2U0 1454 aa-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 C1orf167Q5SNV9 1468 aa-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 MRC2Q9UBG0 1479 aa-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 URB1O60287 2271 aaKnown RBP-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 LYSTQ99698 3801 aa-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 QRICH2Q9H0J4 1663 aa-0.81□□□□□ -2.54
RNU2-56P-201ENST00000516826 FOCADQ5VW36 1801 aa-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 EHBP1L1Q8N3D4 1523 aa-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 SYS1-DBNDD2H3BUS1 97 aa-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 UBE2D3P61077 147 aa-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 UBE2D2P62837 147 aa-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 CCDC58Q4VC31 144 aa-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 LCN9Q8WX39 176 aa-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 PP6455Q8WZ26 134 aa-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 PRO1933Q9H354 126 aa-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 PHLPP1O60346 1717 aa-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 PRRC2CQ9Y520 2896 aaKnown RBP-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 ADGRL2O95490 1459 aa-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 AKAP13Q12802 2813 aa-0.82□□□□□ -2.54
RNU2-56P-201ENST00000516826 HIVEP1P15822 2718 aa-0.83□□□□□ -2.54
RNU2-56P-201ENST00000516826 ROBO1Q9Y6N7 1651 aa-0.83□□□□□ -2.54
RNU2-56P-201ENST00000516826 F6UZH7 168 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms