RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 TRBV12-3P01733 135 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 CD164Q04900 197 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 PSMG4Q5JS54 123 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 PVRIGQ6DKI7 326 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 C10orf99Q6UWK7 81 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 LINC00643Q86TS7 51 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 A0A0J9YXY3 114 aa4.22□□□□□ -1.73
SOX2-OT-218ENST00000498731 C5orf56Q8N8D9 126 aa4.22□□□□□ -1.73
SOX2-OT-218ENST00000498731 IGIPA6NJ69 53 aa4.22□□□□□ -1.73
SOX2-OT-218ENST00000498731 CTSGP08311 255 aa4.22□□□□□ -1.73
SOX2-OT-218ENST00000498731 DEFB113Q30KQ7 82 aa4.22□□□□□ -1.73
SOX2-OT-218ENST00000498731 FAM229BQ4G0N7 80 aa4.22□□□□□ -1.73
SOX2-OT-218ENST00000498731 RPL18AQ02543 176 aaKnown RBP4.22□□□□□ -1.73
SOX2-OT-218ENST00000498731 IMUPQ9GZP8 106 aa4.22□□□□□ -1.73
SOX2-OT-218ENST00000498731 MGPP08493 103 aa4.21□□□□□ -1.74
SOX2-OT-218ENST00000498731 GPHB5Q86YW7 130 aa4.21□□□□□ -1.74
SOX2-OT-218ENST00000498731 H3BT86 120 aa4.21□□□□□ -1.74
SOX2-OT-218ENST00000498731 LGALS3P17931 250 aaKnown RBP4.21□□□□□ -1.74
SOX2-OT-218ENST00000498731 SPANXN1Q5VSR9 72 aa4.21□□□□□ -1.74
SOX2-OT-218ENST00000498731 LINC00846Q9NV44 126 aa4.21□□□□□ -1.74
SOX2-OT-218ENST00000498731 A0A0J9YXV3 536 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 HTN1P15515 57 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 APOC4P55056 127 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 Q8N6K4 173 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 OVOL2Q9BRP0 275 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 FBN1P35555 2871 aaKnown RBP4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 INAFM1C9JVW0 142 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 RPL28P46779 137 aaKnown RBP4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 DSCR9P59020 149 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 BEAN1Q3B7T3 259 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 COX8CQ7Z4L0 72 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 SERP2Q8N6R1 65 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 C20orf173Q96LM9 149 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 NOTCH1P46531 2555 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 SYNJ2BPP57105 145 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 C20orf197Q8N268 126 aa4.2□□□□□ -1.74
SOX2-OT-218ENST00000498731 TRAV23DV6A0A075B6W5 121 aa4.19□□□□□ -1.74
SOX2-OT-218ENST00000498731 DEFB136Q30KP8 78 aa4.19□□□□□ -1.74
SOX2-OT-218ENST00000498731 UNQ9165/PRO28630Q6UXU0 137 aa4.19□□□□□ -1.74
SOX2-OT-218ENST00000498731 ATOX1O00244 68 aa4.19□□□□□ -1.74
SOX2-OT-218ENST00000498731 C14orf132Q9NPU4 83 aa4.19□□□□□ -1.74
SOX2-OT-218ENST00000498731 F6UB75 175 aa4.19□□□□□ -1.74
SOX2-OT-218ENST00000498731 ZNF876PQ49A33 203 aa4.19□□□□□ -1.74
SOX2-OT-218ENST00000498731 SLC50A1Q9BRV3 221 aa4.19□□□□□ -1.74
SOX2-OT-218ENST00000498731 A8MU10 97 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 EPM2AB3EWF7 344 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 GNRH2O43555 120 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 FAM104AQ969W3 186 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 ZNF625Q96I27 306 aaPredicted RBP4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 SNURFQ9Y675 71 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 IGHV3-30-3P0DP02 117 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 IGHV4-31P0DP07 118 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 ORMDL2Q53FV1 153 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 A6NDX4 124 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 LY6G6DO95868 133 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 S100A4P26447 101 aaKnown RBP4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 SOSTDC1Q6X4U4 206 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 TMEM61Q8N0U2 210 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 RHPN1-AS1Q9BWJ2 59 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 C19orf73Q9NVV2 129 aa4.18□□□□□ -1.74
SOX2-OT-218ENST00000498731 H7BZZ5 65 aa4.17□□□□□ -1.74
SOX2-OT-218ENST00000498731 BAALC-AS2P0C853 105 aa4.17□□□□□ -1.74
SOX2-OT-218ENST00000498731 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
SOX2-OT-218ENST00000498731 MPLKIPQ8TAP9 179 aa4.17□□□□□ -1.74
SOX2-OT-218ENST00000498731 TMEM243Q9BU79 118 aa4.17□□□□□ -1.74
SOX2-OT-218ENST00000498731 BUB3O43684 328 aa4.17□□□□□ -1.74
SOX2-OT-218ENST00000498731 RMI2Q96E14 147 aa4.17□□□□□ -1.74
SOX2-OT-218ENST00000498731 CXCL5P42830 114 aa4.17□□□□□ -1.74
SOX2-OT-218ENST00000498731 LINC00315P59091 139 aa4.17□□□□□ -1.74
SOX2-OT-218ENST00000498731 TENM1Q9UKZ4 2725 aa4.16□□□□□ -1.74
SOX2-OT-218ENST00000498731 LEPROTO15243 131 aa4.16□□□□□ -1.74
SOX2-OT-218ENST00000498731 IGHG2P01859 326 aa4.16□□□□□ -1.74
SOX2-OT-218ENST00000498731 RBMY1CP0DJD4 496 aa4.16□□□□□ -1.74
SOX2-OT-218ENST00000498731 LYPD1Q8N2G4 141 aa4.16□□□□□ -1.74
SOX2-OT-218ENST00000498731 C18orf65Q6ZTR6 163 aa4.16□□□□□ -1.74
SOX2-OT-218ENST00000498731 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.15□□□□□ -1.74
SOX2-OT-218ENST00000498731 RNASE4P34096 147 aaKnown RBP4.15□□□□□ -1.74
SOX2-OT-218ENST00000498731 RBM3P98179 157 aaKnown RBP4.15□□□□□ -1.74
SOX2-OT-218ENST00000498731 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.15□□□□□ -1.74
SOX2-OT-218ENST00000498731 Q75L30 129 aa4.15□□□□□ -1.74
SOX2-OT-218ENST00000498731 KLK9Q9UKQ9 250 aa4.15□□□□□ -1.74
SOX2-OT-218ENST00000498731 UBE2D4Q9Y2X8 147 aa4.15□□□□□ -1.74
SOX2-OT-218ENST00000498731 NCR3O14931 201 aa4.15□□□□□ -1.74
SOX2-OT-218ENST00000498731 SLPIP03973 132 aa4.15□□□□□ -1.74
SOX2-OT-218ENST00000498731 XCL1P47992 114 aa4.15□□□□□ -1.74
SOX2-OT-218ENST00000498731 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.15□□□□□ -1.74
SOX2-OT-218ENST00000498731 XCL2Q9UBD3 114 aa4.15□□□□□ -1.74
SOX2-OT-218ENST00000498731 ATP5G1P05496 136 aa4.15□□□□□ -1.75
SOX2-OT-218ENST00000498731 USMG5Q96IX5 58 aa4.15□□□□□ -1.75
SOX2-OT-218ENST00000498731 A0A087WYN8 130 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 SLURP1P55000 103 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 DYNLRB2Q8TF09 96 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 FAM30AQ9NZY2 134 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 IGHV3OR16-12A0A075B7B8 117 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 ACYP1P07311 99 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 S100A7L2Q5SY68 101 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 SUMO4Q6EEV6 95 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 PRIMA1Q86XR5 153 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 TRAV12-2A0A075B6T6 113 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms