RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	IGHV3-64	A0A075B6Q5	118 aa		7.6	□□□□□ -1.19
APTX-223	ENST00000479656	SIVA1	O15304	175 aa		7.6	□□□□□ -1.19
APTX-223	ENST00000479656	LINC01556	Q5JQF7	62 aa		7.6	□□□□□ -1.19
APTX-223	ENST00000479656	ENHO	Q6UWT2	76 aa		7.6	□□□□□ -1.19
APTX-223	ENST00000479656	IGLV10-54	A0A075B6I4	117 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656	IGLV5-45	A0A087WSX0	123 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656		E9PLD3	99 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656	CCL25	O15444	150 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656	SPINK8	P0C7L1	97 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656	DNAH10OS	P0CZ25	163 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656	XCL1	P47992	114 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656	HERVK_113	P61574	105 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656	PCP2	Q8IVA1	136 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656	UBE2W	Q96B02	151 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656	TTTY13	Q9BZ97	58 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656	PRR34	Q9NV39	138 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656	TP73-AS1	Q9UF72	201 aa		7.59	□□□□□ -1.19
APTX-223	ENST00000479656	TRAV8-3	A0A0A6YYJ7	113 aa		7.58	□□□□□ -1.2
APTX-223	ENST00000479656	CFAP161	Q6P656	301 aa		7.58	□□□□□ -1.2
APTX-223	ENST00000479656	UPK3B	Q9BT76	320 aa		7.58	□□□□□ -1.2
APTX-223	ENST00000479656	IGHV3OR16-9	A0A0B4J2B5	98 aa		7.58	□□□□□ -1.2
APTX-223	ENST00000479656		H3BRM9	83 aa		7.58	□□□□□ -1.2
APTX-223	ENST00000479656	COX8A	P10176	69 aa		7.58	□□□□□ -1.2
APTX-223	ENST00000479656	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	7.58	□□□□□ -1.2
APTX-223	ENST00000479656	MIEN1	Q9BRT3	115 aa		7.58	□□□□□ -1.2
APTX-223	ENST00000479656		Q9H8V8	135 aa		7.58	□□□□□ -1.2
APTX-223	ENST00000479656	CRP	P02741	224 aa		7.57	□□□□□ -1.2
APTX-223	ENST00000479656	C5orf38	Q86SI9	138 aa		7.57	□□□□□ -1.2
APTX-223	ENST00000479656	UBE2DNL	Q8IWF7	75 aa		7.57	□□□□□ -1.2
APTX-223	ENST00000479656	MAPKAPK5-AS1	Q8N8E1	139 aa		7.57	□□□□□ -1.2
APTX-223	ENST00000479656	MUC7	Q8TAX7	377 aa		7.57	□□□□□ -1.2
APTX-223	ENST00000479656	UQCR10	Q9UDW1	63 aa		7.57	□□□□□ -1.2
APTX-223	ENST00000479656	IGHV1-58	A0A0C4DH39	117 aa		7.56	□□□□□ -1.2
APTX-223	ENST00000479656	SLC25A34	Q6PIV7	304 aa		7.56	□□□□□ -1.2
APTX-223	ENST00000479656	DYNC2H1	Q8NCM8	4307 aa	Known RBP	7.56	□□□□□ -1.2
APTX-223	ENST00000479656	LEPROT	O15243	131 aa		7.55	□□□□□ -1.2
APTX-223	ENST00000479656	DLEU1	O43261	78 aa		7.55	□□□□□ -1.2
APTX-223	ENST00000479656	TSPEAR-AS2	P59090	65 aa		7.55	□□□□□ -1.2
APTX-223	ENST00000479656	BOD1L2	Q8IYS8	172 aa		7.55	□□□□□ -1.2
APTX-223	ENST00000479656	WWC2-AS2	Q96NR7	200 aa		7.55	□□□□□ -1.2
APTX-223	ENST00000479656	SMIM1	B2RUZ4	78 aa		7.55	□□□□□ -1.2
APTX-223	ENST00000479656		J3QQQ9	107 aa		7.55	□□□□□ -1.2
APTX-223	ENST00000479656	CD164L2	Q6UWJ8	174 aa		7.55	□□□□□ -1.2
APTX-223	ENST00000479656		A0A087WZ39	114 aa		7.54	□□□□□ -1.2
APTX-223	ENST00000479656	TRAV8-4	A0A0B4J246	113 aa		7.54	□□□□□ -1.2
APTX-223	ENST00000479656	GAGE12H	A6NDE8	117 aa		7.54	□□□□□ -1.2
APTX-223	ENST00000479656	MIA	Q16674	131 aa		7.54	□□□□□ -1.2
APTX-223	ENST00000479656	CSMD3	Q7Z407	3707 aa		7.54	□□□□□ -1.2
APTX-223	ENST00000479656	LGALS3	P17931	250 aa	Known RBP	7.53	□□□□□ -1.2
APTX-223	ENST00000479656	FOXI1	Q12951	378 aa		7.53	□□□□□ -1.2
APTX-223	ENST00000479656	PLEKHB2	Q96CS7	222 aa		7.53	□□□□□ -1.2
APTX-223	ENST00000479656	IGLV5-39	A0A0G2JS06	123 aa		7.53	□□□□□ -1.2
APTX-223	ENST00000479656	MYMX	A0A1B0GTQ4	84 aa		7.53	□□□□□ -1.2
APTX-223	ENST00000479656	IBA57-AS1	B1ANH7	110 aa		7.53	□□□□□ -1.2
APTX-223	ENST00000479656	PLEC	Q15149	4684 aa	Known RBP	7.53	□□□□□ -1.2
APTX-223	ENST00000479656	ZNF815P	A8K554	130 aa		7.52	□□□□□ -1.21
APTX-223	ENST00000479656	COX7A2L	O14548	114 aa		7.52	□□□□□ -1.21
APTX-223	ENST00000479656		Q9HAA7	133 aa		7.52	□□□□□ -1.21
APTX-223	ENST00000479656	STARD9	Q9P2P6	4700 aa		7.52	□□□□□ -1.21
APTX-223	ENST00000479656	DNAH7	Q8WXX0	4024 aa		7.52	□□□□□ -1.21
APTX-223	ENST00000479656	HNRNPA3	P51991	378 aa	Known RBP	7.51	□□□□□ -1.21
APTX-223	ENST00000479656	IGKV2D-24	A0A075B6R9	120 aa		7.51	□□□□□ -1.21
APTX-223	ENST00000479656	MAL	P21145	153 aa		7.51	□□□□□ -1.21
APTX-223	ENST00000479656	KRTAP26-1	Q6PEX3	210 aa		7.51	□□□□□ -1.21
APTX-223	ENST00000479656	C2orf91	Q6ZV80	131 aa		7.51	□□□□□ -1.21
APTX-223	ENST00000479656	C10orf126	Q8N4M7	172 aa		7.51	□□□□□ -1.21
APTX-223	ENST00000479656	TOMM7	Q9P0U1	55 aa		7.51	□□□□□ -1.21
APTX-223	ENST00000479656	C1orf43	Q9BWL3	253 aa		7.5	□□□□□ -1.21
APTX-223	ENST00000479656	LINC01561	Q8N1V8	128 aa		7.49	□□□□□ -1.21
APTX-223	ENST00000479656	COX7B2	Q8TF08	81 aa		7.49	□□□□□ -1.21
APTX-223	ENST00000479656	KRTAP1-5	Q9BYS1	174 aa		7.49	□□□□□ -1.21
APTX-223	ENST00000479656	NDUFA12	Q9UI09	145 aa		7.49	□□□□□ -1.21
APTX-223	ENST00000479656	CASC10	Q5T4H9	136 aa		7.49	□□□□□ -1.21
APTX-223	ENST00000479656	TG	P01266	2768 aa		7.48	□□□□□ -1.21
APTX-223	ENST00000479656		K7EP13	123 aa		7.48	□□□□□ -1.21
APTX-223	ENST00000479656	EREG	O14944	169 aa		7.48	□□□□□ -1.21
APTX-223	ENST00000479656	SCGB1D4	Q6XE38	83 aa		7.48	□□□□□ -1.21
APTX-223	ENST00000479656	ORAOV1	Q8WV07	137 aa		7.48	□□□□□ -1.21
APTX-223	ENST00000479656	C6orf226	Q5I0X4	101 aa		7.47	□□□□□ -1.21
APTX-223	ENST00000479656	LYST	Q99698	3801 aa		7.47	□□□□□ -1.21
APTX-223	ENST00000479656		M0R143	59 aa		7.47	□□□□□ -1.21
APTX-223	ENST00000479656	APOM	O95445	188 aa		7.47	□□□□□ -1.21
APTX-223	ENST00000479656	ZNF625	Q96I27	306 aa	Predicted RBP	7.47	□□□□□ -1.21
APTX-223	ENST00000479656		A0A0J9YXY3	114 aa		7.46	□□□□□ -1.22
APTX-223	ENST00000479656	NDUFA1	O15239	70 aa		7.46	□□□□□ -1.22
APTX-223	ENST00000479656	PRSS2	P07478	247 aa		7.46	□□□□□ -1.22
APTX-223	ENST00000479656	KIAA0087	Q14695	138 aa		7.46	□□□□□ -1.22
APTX-223	ENST00000479656	HIGD1B	Q9P298	99 aa		7.46	□□□□□ -1.22
APTX-223	ENST00000479656	NBDY	A0A0U1RRE5	68 aa		7.45	□□□□□ -1.22
APTX-223	ENST00000479656	C3orf84	H3BNL1	204 aa		7.45	□□□□□ -1.22
APTX-223	ENST00000479656		Q8IZM0	81 aa		7.45	□□□□□ -1.22
APTX-223	ENST00000479656	RMI2	Q96E14	147 aa		7.45	□□□□□ -1.22
APTX-223	ENST00000479656	SNHG12	Q9BXW3	62 aa		7.45	□□□□□ -1.22
APTX-223	ENST00000479656	DNAH1	Q9P2D7	4330 aa		7.45	□□□□□ -1.22
APTX-223	ENST00000479656		M0R2N4	97 aa		7.45	□□□□□ -1.22
APTX-223	ENST00000479656	LINC00526	Q96FQ7	95 aa		7.45	□□□□□ -1.22
APTX-223	ENST00000479656	TENM2	Q9NT68	2774 aa		7.45	□□□□□ -1.22
APTX-223	ENST00000479656	C2orf82	Q6UX34	121 aa		7.44	□□□□□ -1.22
APTX-223	ENST00000479656	C6orf223	Q8N319	242 aa		7.44	□□□□□ -1.22
APTX-223	ENST00000479656	LY6G6C	O95867	125 aa		7.43	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms